NP-MRD: Showing NP-Card for 2',4',6'-Trihydroxychalcone (NP0054640)

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Record Information

Version

2.0

Created at

2022-04-28 00:55:48 UTC

Updated at

2022-04-28 00:55:48 UTC

NP-MRD ID

NP0054640

Secondary Accession Numbers

None

Natural Product Identification

Common Name

2',4',6'-Trihydroxychalcone

Description

2',4',6'-Trihydroxychalcone is found in Adiantum sulphureum, Alpinia zerumbet, Boesenbergia rotunda, Chromolaena chasleae, Helichrysum acutatum, Helichrysum forskahlii , Helichrysum kraussii , Helichrysum polycladum, Helichrysum trilineatum, Hymenoclea salsola, Piper sarmentosum, Populus alba, Populus angustifolia, Populus deltoides, Populus laurifolia, Populus maximowiczii, Populus sieboldii, Populus szechuanica, Populus yunnanensis, Vitis rupestris and Vitis vinifera .

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 31 32  0  0  0  0  0  0  0  0999 V2000
   -0.8726   -2.3641   -1.0441 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7397   -1.0962   -0.5686 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6191   -0.7472   -0.5175 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3373    0.2646   -0.1750 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8076    0.2846   -0.2562 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4659    1.4421    0.1457 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8321    1.5150    0.0909 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5778    0.4477   -0.3614 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9423   -0.7018   -0.7616 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5431   -0.7530   -0.6966 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0135   -0.5585   -0.2866 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2760    0.6817    0.2023 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2682    1.5632    0.4776 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5903    1.1461    0.4588 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6632    0.3561    0.2223 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9801    0.7845    0.4652 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4428   -0.8969   -0.2689 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1692   -1.3395   -0.5146 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0341   -2.6403   -1.0189 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2991   -1.6139   -0.8892 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8386    1.1326    0.1862 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9024    2.2872    0.5022 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3798    2.3950    0.3936 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6741    0.5284   -0.3968 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5322   -1.5311   -1.1137 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1368   -1.6950   -1.0314 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4539    2.4748    0.8365 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7393    2.1476    0.8497 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5394    1.2474   -0.2171 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2956   -1.5322   -0.4597 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8101   -3.2289   -1.1965 H   0  0  0  0  0  0  0  0  0  0  0  0
 16 15  1  0
 15 14  2  0
 14 12  1  0
 12 13  1  0
 12 11  2  0
 11  2  1  0
  2  1  2  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  2  0
 11 18  1  0
 18 19  1  0
 18 17  2  0
 17 15  1  0
 10  5  1  0
 16 29  1  0
 14 28  1  0
 13 27  1  0
  3 20  1  0
  4 21  1  0
  6 22  1  0
  7 23  1  0
  8 24  1  0
  9 25  1  0
 10 26  1  0
 19 31  1  0
 17 30  1  0
M  END


  Mrv1652303082008412D          

 19 20  0  0  0  0            999 V2000
    2.8579   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -4.1250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -5.3625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -5.3625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -7.4250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -7.8375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -7.4250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -4.1250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  4  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  7  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 11 16  1  0  0  0  0
  6 17  1  0  0  0  0
 17 18  1  0  0  0  0
 17 19  2  0  0  0  0
  2 19  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0054640

> <DATABASE_NAME>
NP-MRD

> <SMILES>
OC1=CC(O)=C(C(=O)\C=C\C2=CC=CC=C2)C(O)=C1

> <INCHI_IDENTIFIER>
InChI=1S/C15H12O4/c16-11-8-13(18)15(14(19)9-11)12(17)7-6-10-4-2-1-3-5-10/h1-9,16,18-19H/b7-6+

> <INCHI_KEY>
LOYXTWZXLWHMBX-VOTSOKGWSA-N

> <FORMULA>
C15H12O4

> <MOLECULAR_WEIGHT>
256.257

> <EXACT_MASS>
256.073558866

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
31

> <JCHEM_AVERAGE_POLARIZABILITY>
26.341572737110262

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2E)-3-phenyl-1-(2,4,6-trihydroxyphenyl)prop-2-en-1-one

> <ALOGPS_LOGP>
3.14

> <JCHEM_LOGP>
4.279629344

> <ALOGPS_LOGS>
-3.40

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
8.24289383541464

> <JCHEM_PKA_STRONGEST_ACIDIC>
6.9973036039015994

> <JCHEM_PKA_STRONGEST_BASIC>
-6.327031656025134

> <JCHEM_POLAR_SURFACE_AREA>
77.76

> <JCHEM_REFRACTIVITY>
72.81970000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.02e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
pinocembrin chalcone

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 08-MAR-20   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   08-MAR-20         0                                  
HETATM    1  O   UNK     0       5.335  -3.080   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0       5.335  -4.620   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       6.668  -5.390   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       6.668  -6.930   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0       8.002  -7.700   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0       5.335  -7.700   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       5.335  -9.240   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       6.668 -10.010   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       4.001 -10.010   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       4.001 -11.550   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       2.667 -12.320   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.667 -13.860   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       1.334 -14.630   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       0.000 -13.860   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       0.000 -12.320   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       1.334 -11.550   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       4.001  -6.930   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0       2.667  -7.700   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0       4.001  -5.390   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   19                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7   17                                                  
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12   16                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   11                                                       
CONECT   17    6   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17    2                                                       
MASTER        0    0    0    0    0    0    0    0   19    0   40    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₅H₁₂O₄

Average Mass

256.2570 Da

Monoisotopic Mass

256.07356 Da

IUPAC Name

(2E)-3-phenyl-1-(2,4,6-trihydroxyphenyl)prop-2-en-1-one

Traditional Name

pinocembrin chalcone

CAS Registry Number

Not Available

SMILES

OC1=CC(O)=C(C(=O)\C=C\C2=CC=CC=C2)C(O)=C1

InChI Identifier

InChI=1S/C15H12O4/c16-11-8-13(18)15(14(19)9-11)12(17)7-6-10-4-2-1-3-5-10/h1-9,16,18-19H/b7-6+

InChI Key

LOYXTWZXLWHMBX-VOTSOKGWSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Adiantum sulphureum	Plant	KNApSAcK
Alpinia zerumbet	LOTUS Database	35616633
Boesenbergia rotunda	LOTUS Database	35616633
Chromolaena chasleae	Plant	KNApSAcK
Helichrysum acutatum	Plant	KNApSAcK
Helichrysum forskahlii	Plant	KNApSAcK
Helichrysum kraussii	Plant	KNApSAcK
Helichrysum polycladum	Plant	KNApSAcK
Helichrysum trilineatum	LOTUS Database	35616633
Hymenoclea salsola	Plant	KNApSAcK
Piper sarmentosum	LOTUS Database	35616633
Populus alba	LOTUS Database	35616633
Populus angustifolia	Plant	KNApSAcK
Populus deltoides	Plant	KNApSAcK
Populus laurifolia	LOTUS Database	35616633
Populus maximowiczii	LOTUS Database	35616633
Populus sieboldii	Plant	KNApSAcK
Populus szechuanica	LOTUS Database	35616633
Populus yunnanensis	LOTUS Database	35616633
Vitis rupestris	Plant	KNApSAcK
Vitis vinifera L.	Plant	KNApSAcK

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.14	ALOGPS
logP	4.28	ChemAxon
logS	-3.4	ALOGPS
pKa (Strongest Acidic)	7	ChemAxon
pKa (Strongest Basic)	-6.3	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	77.76 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	72.82 m³·mol⁻¹	ChemAxon
Polarizability	26.34 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

Not Available

References

General References

Not Available

Showing NP-Card for 2',4',6'-Trihydroxychalcone (NP0054640)

MOL for NP0054640 (2',4',6'-Trihydroxychalcone)

3D MOL for NP0054640 (2',4',6'-Trihydroxychalcone)

3D SDF for NP0054640 (2',4',6'-Trihydroxychalcone)

3D-SDF for NP0054640 (2',4',6'-Trihydroxychalcone)

PDB for NP0054640 (2',4',6'-Trihydroxychalcone)

3D PDB for NP0054640 (2',4',6'-Trihydroxychalcone)

SMILES for NP0054640 (2',4',6'-Trihydroxychalcone)

INCHI for NP0054640 (2',4',6'-Trihydroxychalcone)

Structure for NP0054640 (2',4',6'-Trihydroxychalcone)

3D Structure for NP0054640 (2',4',6'-Trihydroxychalcone)