Showing NP-Card for Peonidin 3-gentiotrioside (NP0054483)
| Record Information | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Version | 2.0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Created at | 2022-04-28 00:49:27 UTC | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Updated at | 2022-04-28 00:49:27 UTC | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| NP-MRD ID | NP0054483 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Secondary Accession Numbers | None | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural Product Identification | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Common Name | Peonidin 3-gentiotrioside | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Description | Peonidin 3-gentiotrioside is found in Primula spp. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Structure | MOL for NP0054483 (Peonidin 3-gentiotrioside)
Mrv1652304282202492D
55 60 0 0 1 0 999 V2000
-0.7145 -0.4125 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.7145 -1.2375 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
0.0000 -1.6500 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
0.7145 -1.2375 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
0.7145 -0.4125 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
0.0000 -0.0000 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
1.4289 -0.0000 0.0000 O 0 3 0 0 0 0 0 0 0 0 0 0
2.1434 -0.4125 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.1434 -1.2375 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
1.4289 -1.6500 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.8579 -1.6500 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
2.8579 -2.4750 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0
3.5724 -2.8875 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0
3.5724 -3.7125 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0
2.8579 -4.1250 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0
2.1434 -3.7125 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0
2.1434 -2.8875 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
1.4289 -4.1250 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
1.4289 -4.9500 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
0.7145 -5.3625 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0
0.7145 -6.1875 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0
-0.0000 -6.6000 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0
-0.7145 -6.1875 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0
-0.7145 -5.3625 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0
0.0000 -4.9500 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.4289 -4.9500 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.1434 -5.3625 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-2.8579 -4.9500 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0
-3.5724 -5.3625 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0
-4.2868 -4.9500 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0
-4.2868 -4.1250 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0
-3.5724 -3.7125 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0
-2.8579 -4.1250 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-3.5724 -2.8875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.2868 -2.4750 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.0013 -3.7125 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.0013 -5.3625 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-3.5724 -6.1875 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.4289 -6.6000 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.0000 -7.4250 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
1.4289 -6.6000 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
2.8579 -4.9500 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
4.2868 -4.1250 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
4.2868 -2.4750 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
2.8579 -0.0000 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.8579 0.8250 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.5724 1.2375 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.2868 0.8250 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.2868 -0.0000 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.5724 -0.4125 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.0013 -0.4125 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
5.7158 -0.0000 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.0013 1.2375 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
0.0000 -2.4750 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.4289 0.0000 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
1 2 2 0 0 0 0
2 3 1 0 0 0 0
3 4 2 0 0 0 0
4 5 1 0 0 0 0
5 6 2 0 0 0 0
1 6 1 0 0 0 0
5 7 1 0 0 0 0
7 8 2 0 0 0 0
8 9 1 0 0 0 0
9 10 2 0 0 0 0
4 10 1 0 0 0 0
9 11 1 0 0 0 0
12 11 1 1 0 0 0
12 13 1 0 0 0 0
13 14 1 0 0 0 0
14 15 1 0 0 0 0
15 16 1 0 0 0 0
16 17 1 0 0 0 0
12 17 1 0 0 0 0
16 18 1 1 0 0 0
18 19 1 0 0 0 0
20 19 1 1 0 0 0
20 21 1 0 0 0 0
21 22 1 0 0 0 0
22 23 1 0 0 0 0
23 24 1 0 0 0 0
24 25 1 0 0 0 0
20 25 1 0 0 0 0
24 26 1 1 0 0 0
26 27 1 0 0 0 0
28 27 1 1 0 0 0
28 29 1 0 0 0 0
29 30 1 0 0 0 0
30 31 1 0 0 0 0
31 32 1 0 0 0 0
32 33 1 0 0 0 0
28 33 1 0 0 0 0
32 34 1 1 0 0 0
34 35 1 0 0 0 0
31 36 1 6 0 0 0
30 37 1 1 0 0 0
29 38 1 6 0 0 0
23 39 1 6 0 0 0
22 40 1 1 0 0 0
21 41 1 1 0 0 0
15 42 1 6 0 0 0
14 43 1 1 0 0 0
13 44 1 6 0 0 0
8 45 1 0 0 0 0
45 46 2 0 0 0 0
46 47 1 0 0 0 0
47 48 2 0 0 0 0
48 49 1 0 0 0 0
49 50 2 0 0 0 0
45 50 1 0 0 0 0
49 51 1 0 0 0 0
51 52 1 0 0 0 0
48 53 1 0 0 0 0
3 54 1 0 0 0 0
1 55 1 0 0 0 0
M CHG 1 7 1
M END
3D MOL for NP0054483 (Peonidin 3-gentiotrioside)
RDKit 3D
98103 0 0 0 0 0 0 0 0999 V2000
-10.1511 -2.3729 0.5362 C 0 0 0 0 0 0 0 0 0 0 0 0
-9.5844 -2.9405 -0.6222 O 0 0 0 0 0 0 0 0 0 0 0 0
-8.2320 -2.7526 -0.8908 C 0 0 0 0 0 0 0 0 0 0 0 0
-7.4306 -2.0305 -0.0489 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.0590 -1.8678 -0.3732 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.2554 -1.1209 0.5697 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.8024 -0.8144 1.7598 O 0 0 0 0 0 3 0 0 0 0 0 0
-5.2052 -0.1538 2.6967 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.8444 0.1108 3.8710 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.2423 0.8177 4.9069 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.9459 1.0480 6.0628 O 0 0 0 0 0 0 0 0 0 0 0 0
-3.9596 1.2703 4.7529 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.2809 1.0124 3.5569 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.9866 1.4647 3.3941 O 0 0 0 0 0 0 0 0 0 0 0 0
-3.9029 0.3064 2.5402 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.2612 0.0436 1.3602 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.9782 -0.6790 0.3883 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.3612 -0.9546 -0.8276 O 0 0 0 0 0 0 0 0 0 0 0 0
-2.0560 -0.6133 -1.1922 C 0 0 2 0 0 0 0 0 0 0 0 0
-2.0287 0.7835 -1.5172 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.7301 1.0592 -2.0285 C 0 0 2 0 0 0 0 0 0 0 0 0
-0.4150 2.4392 -1.5959 C 0 0 0 0 0 0 0 0 0 0 0 0
0.7497 3.0217 -1.9647 O 0 0 0 0 0 0 0 0 0 0 0 0
1.8707 2.3124 -1.7128 C 0 0 2 0 0 0 0 0 0 0 0 0
2.5085 2.7387 -0.4698 O 0 0 0 0 0 0 0 0 0 0 0 0
3.6292 1.8573 -0.4106 C 0 0 2 0 0 0 0 0 0 0 0 0
3.9338 1.4244 0.9759 C 0 0 0 0 0 0 0 0 0 0 0 0
4.9945 0.5326 1.0417 O 0 0 0 0 0 0 0 0 0 0 0 0
5.2690 0.0613 2.3069 C 0 0 2 0 0 0 0 0 0 0 0 0
6.5550 0.2638 2.7510 O 0 0 0 0 0 0 0 0 0 0 0 0
7.5149 -0.3467 1.9894 C 0 0 2 0 0 0 0 0 0 0 0 0
8.0951 0.6165 0.9381 C 0 0 0 0 0 0 0 0 0 0 0 0
8.6779 1.7085 1.5836 O 0 0 0 0 0 0 0 0 0 0 0 0
7.2074 -1.6913 1.4451 C 0 0 1 0 0 0 0 0 0 0 0 0
7.8434 -2.7289 2.1490 O 0 0 0 0 0 0 0 0 0 0 0 0
5.7807 -2.0410 1.2423 C 0 0 2 0 0 0 0 0 0 0 0 0
5.3067 -1.7286 -0.0301 O 0 0 0 0 0 0 0 0 0 0 0 0
4.9219 -1.4321 2.3143 C 0 0 1 0 0 0 0 0 0 0 0 0
5.0756 -1.9971 3.5495 O 0 0 0 0 0 0 0 0 0 0 0 0
4.7163 2.6003 -1.1315 C 0 0 1 0 0 0 0 0 0 0 0 0
5.6418 1.7842 -1.7707 O 0 0 0 0 0 0 0 0 0 0 0 0
4.0146 3.3779 -2.2531 C 0 0 2 0 0 0 0 0 0 0 0 0
3.4628 4.5481 -1.7621 O 0 0 0 0 0 0 0 0 0 0 0 0
2.8916 2.4918 -2.7918 C 0 0 2 0 0 0 0 0 0 0 0 0
2.3455 3.1731 -3.8995 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.8048 0.7517 -3.4766 C 0 0 1 0 0 0 0 0 0 0 0 0
0.4176 0.8278 -4.1435 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.3844 -0.6625 -3.6089 C 0 0 2 0 0 0 0 0 0 0 0 0
-2.5967 -0.6319 -4.2987 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.4628 -1.4004 -2.2941 C 0 0 1 0 0 0 0 0 0 0 0 0
-0.2558 -1.9929 -1.9351 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.5713 -2.4332 -1.5121 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.4320 -3.1645 -2.3438 C 0 0 0 0 0 0 0 0 0 0 0 0
-7.7639 -3.3459 -2.0681 C 0 0 0 0 0 0 0 0 0 0 0 0
-8.6085 -4.0693 -2.8931 O 0 0 0 0 0 0 0 0 0 0 0 0
-11.1859 -2.7712 0.6209 H 0 0 0 0 0 0 0 0 0 0 0 0
-10.2691 -1.2648 0.4364 H 0 0 0 0 0 0 0 0 0 0 0 0
-9.5133 -2.5976 1.3904 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.8356 -1.5841 0.8599 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.8595 -0.2517 3.9820 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.5102 1.5652 6.8316 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.4491 1.8336 5.5490 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.3854 1.3679 2.6182 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.2725 0.3647 1.1673 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.4139 -0.6436 -0.2986 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.0555 0.2993 -1.5328 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.2976 3.1023 -1.8999 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.4855 2.4548 -0.4472 H 0 0 0 0 0 0 0 0 0 0 0 0
1.6717 1.2375 -1.4162 H 0 0 0 0 0 0 0 0 0 0 0 0
3.3574 0.9611 -1.0177 H 0 0 0 0 0 0 0 0 0 0 0 0
3.0354 0.9208 1.3869 H 0 0 0 0 0 0 0 0 0 0 0 0
4.1132 2.2910 1.6508 H 0 0 0 0 0 0 0 0 0 0 0 0
4.5709 0.5360 3.0168 H 0 0 0 0 0 0 0 0 0 0 0 0
8.3953 -0.4948 2.6897 H 0 0 0 0 0 0 0 0 0 0 0 0
8.8651 0.1258 0.3413 H 0 0 0 0 0 0 0 0 0 0 0 0
7.3125 1.0237 0.2928 H 0 0 0 0 0 0 0 0 0 0 0 0
8.6549 1.5383 2.5696 H 0 0 0 0 0 0 0 0 0 0 0 0
7.6924 -1.7356 0.4201 H 0 0 0 0 0 0 0 0 0 0 0 0
8.7577 -2.4049 2.3448 H 0 0 0 0 0 0 0 0 0 0 0 0
5.6594 -3.1510 1.3461 H 0 0 0 0 0 0 0 0 0 0 0 0
5.6725 -2.3980 -0.6900 H 0 0 0 0 0 0 0 0 0 0 0 0
3.8705 -1.4848 1.9553 H 0 0 0 0 0 0 0 0 0 0 0 0
6.0563 -2.1315 3.7105 H 0 0 0 0 0 0 0 0 0 0 0 0
5.2415 3.3252 -0.4456 H 0 0 0 0 0 0 0 0 0 0 0 0
6.5679 2.1121 -1.7083 H 0 0 0 0 0 0 0 0 0 0 0 0
4.7265 3.6249 -3.0655 H 0 0 0 0 0 0 0 0 0 0 0 0
3.6638 4.7343 -0.8102 H 0 0 0 0 0 0 0 0 0 0 0 0
3.2547 1.5205 -3.1334 H 0 0 0 0 0 0 0 0 0 0 0 0
2.6197 2.7622 -4.7553 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.5500 1.4665 -3.9321 H 0 0 0 0 0 0 0 0 0 0 0 0
0.4079 1.4609 -4.9042 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.6802 -1.2217 -4.2554 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.7991 0.2918 -4.6454 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.1585 -2.2710 -2.5004 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.1518 -2.8926 -2.3680 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.5494 -2.3471 -1.7878 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.9930 -3.5950 -3.2416 H 0 0 0 0 0 0 0 0 0 0 0 0
-9.5825 -4.1608 -2.6256 H 0 0 0 0 0 0 0 0 0 0 0 0
1 2 1 0
2 3 1 0
3 4 2 0
4 5 1 0
5 52 2 0
52 53 1 0
53 54 2 0
54 55 1 0
5 6 1 0
6 7 2 0
7 8 1 0
8 9 2 0
9 10 1 0
10 11 1 0
10 12 2 0
12 13 1 0
13 14 1 0
13 15 2 0
15 16 1 0
16 17 2 0
17 18 1 0
18 19 1 0
19 20 1 0
20 21 1 0
21 22 1 0
22 23 1 0
23 24 1 0
24 25 1 0
25 26 1 0
26 27 1 0
27 28 1 0
28 29 1 0
29 30 1 0
30 31 1 0
31 32 1 0
32 33 1 0
31 34 1 0
34 35 1 0
34 36 1 0
36 37 1 0
36 38 1 0
38 39 1 0
26 40 1 0
40 41 1 0
40 42 1 0
42 43 1 0
42 44 1 0
44 45 1 0
21 46 1 0
46 47 1 0
46 48 1 0
48 49 1 0
48 50 1 0
50 51 1 0
54 3 1 0
17 6 1 0
50 19 1 0
15 8 1 0
44 24 1 0
38 29 1 0
1 56 1 0
1 57 1 0
1 58 1 0
4 59 1 0
52 96 1 0
53 97 1 0
55 98 1 0
9 60 1 0
11 61 1 0
12 62 1 0
14 63 1 0
16 64 1 0
19 65 1 1
21 66 1 1
22 67 1 0
22 68 1 0
24 69 1 1
26 70 1 6
27 71 1 0
27 72 1 0
29 73 1 1
31 74 1 1
32 75 1 0
32 76 1 0
33 77 1 0
34 78 1 6
35 79 1 0
36 80 1 1
37 81 1 0
38 82 1 6
39 83 1 0
40 84 1 1
41 85 1 0
42 86 1 6
43 87 1 0
44 88 1 6
45 89 1 0
46 90 1 6
47 91 1 0
48 92 1 6
49 93 1 0
50 94 1 6
51 95 1 0
M CHG 1 7 1
M END
3D SDF for NP0054483 (Peonidin 3-gentiotrioside)
Mrv1652304282202492D
55 60 0 0 1 0 999 V2000
-0.7145 -0.4125 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.7145 -1.2375 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
0.0000 -1.6500 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
0.7145 -1.2375 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
0.7145 -0.4125 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
0.0000 -0.0000 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
1.4289 -0.0000 0.0000 O 0 3 0 0 0 0 0 0 0 0 0 0
2.1434 -0.4125 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.1434 -1.2375 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
1.4289 -1.6500 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.8579 -1.6500 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
2.8579 -2.4750 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0
3.5724 -2.8875 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0
3.5724 -3.7125 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0
2.8579 -4.1250 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0
2.1434 -3.7125 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0
2.1434 -2.8875 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
1.4289 -4.1250 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
1.4289 -4.9500 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
0.7145 -5.3625 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0
0.7145 -6.1875 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0
-0.0000 -6.6000 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0
-0.7145 -6.1875 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0
-0.7145 -5.3625 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0
0.0000 -4.9500 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.4289 -4.9500 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.1434 -5.3625 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-2.8579 -4.9500 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0
-3.5724 -5.3625 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0
-4.2868 -4.9500 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0
-4.2868 -4.1250 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0
-3.5724 -3.7125 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0
-2.8579 -4.1250 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-3.5724 -2.8875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.2868 -2.4750 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.0013 -3.7125 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.0013 -5.3625 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-3.5724 -6.1875 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.4289 -6.6000 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.0000 -7.4250 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
1.4289 -6.6000 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
2.8579 -4.9500 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
4.2868 -4.1250 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
4.2868 -2.4750 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
2.8579 -0.0000 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.8579 0.8250 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.5724 1.2375 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.2868 0.8250 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.2868 -0.0000 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.5724 -0.4125 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.0013 -0.4125 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
5.7158 -0.0000 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.0013 1.2375 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
0.0000 -2.4750 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.4289 0.0000 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
1 2 2 0 0 0 0
2 3 1 0 0 0 0
3 4 2 0 0 0 0
4 5 1 0 0 0 0
5 6 2 0 0 0 0
1 6 1 0 0 0 0
5 7 1 0 0 0 0
7 8 2 0 0 0 0
8 9 1 0 0 0 0
9 10 2 0 0 0 0
4 10 1 0 0 0 0
9 11 1 0 0 0 0
12 11 1 1 0 0 0
12 13 1 0 0 0 0
13 14 1 0 0 0 0
14 15 1 0 0 0 0
15 16 1 0 0 0 0
16 17 1 0 0 0 0
12 17 1 0 0 0 0
16 18 1 1 0 0 0
18 19 1 0 0 0 0
20 19 1 1 0 0 0
20 21 1 0 0 0 0
21 22 1 0 0 0 0
22 23 1 0 0 0 0
23 24 1 0 0 0 0
24 25 1 0 0 0 0
20 25 1 0 0 0 0
24 26 1 1 0 0 0
26 27 1 0 0 0 0
28 27 1 1 0 0 0
28 29 1 0 0 0 0
29 30 1 0 0 0 0
30 31 1 0 0 0 0
31 32 1 0 0 0 0
32 33 1 0 0 0 0
28 33 1 0 0 0 0
32 34 1 1 0 0 0
34 35 1 0 0 0 0
31 36 1 6 0 0 0
30 37 1 1 0 0 0
29 38 1 6 0 0 0
23 39 1 6 0 0 0
22 40 1 1 0 0 0
21 41 1 1 0 0 0
15 42 1 6 0 0 0
14 43 1 1 0 0 0
13 44 1 6 0 0 0
8 45 1 0 0 0 0
45 46 2 0 0 0 0
46 47 1 0 0 0 0
47 48 2 0 0 0 0
48 49 1 0 0 0 0
49 50 2 0 0 0 0
45 50 1 0 0 0 0
49 51 1 0 0 0 0
51 52 1 0 0 0 0
48 53 1 0 0 0 0
3 54 1 0 0 0 0
1 55 1 0 0 0 0
M CHG 1 7 1
M END
> <DATABASE_ID>
NP0054483
> <DATABASE_NAME>
NP-MRD
> <SMILES>
COC1=CC(=CC=C1O)C1=[O+]C2=CC(O)=CC(O)=C2C=C1O[C@@H]1O[C@H](CO[C@@H]2O[C@H](CO[C@@H]3O[C@H](CO)[C@@H](O)[C@H](O)[C@H]3O)[C@@H](O)[C@H](O)[C@@H]2O)[C@@H](O)[C@H](O)[C@H]1O
> <INCHI_IDENTIFIER>
InChI=1S/C34H42O21/c1-48-17-4-11(2-3-14(17)37)31-18(7-13-15(38)5-12(36)6-16(13)51-31)52-34-30(47)27(44)24(41)21(55-34)10-50-33-29(46)26(43)23(40)20(54-33)9-49-32-28(45)25(42)22(39)19(8-35)53-32/h2-7,19-30,32-35,39-47H,8-10H2,1H3,(H2-,36,37,38)/p+1/t19-,20-,21-,22-,23-,24-,25+,26+,27+,28-,29+,30-,32-,33-,34-/m1/s1
> <INCHI_KEY>
GIPOLQTYBBGBER-VDHCEEFESA-O
> <FORMULA>
C34H43O21
> <MOLECULAR_WEIGHT>
787.696
> <EXACT_MASS>
787.229134825
> <JCHEM_ACCEPTOR_COUNT>
21
> <JCHEM_ATOM_COUNT>
98
> <JCHEM_AVERAGE_POLARIZABILITY>
76.18502489235934
> <JCHEM_BIOAVAILABILITY>
0
> <JCHEM_DONOR_COUNT>
13
> <JCHEM_FORMAL_CHARGE>
1
> <JCHEM_GHOSE_FILTER>
0
> <JCHEM_IUPAC>
5,7-dihydroxy-2-(4-hydroxy-3-methoxyphenyl)-3-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-({[(2R,3S,4S,5S,6R)-3,4,5-trihydroxy-6-({[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)oxan-2-yl]oxy}methyl)oxan-2-yl]oxy}-1lambda4-chromen-1-ylium
> <ALOGPS_LOGP>
-0.53
> <JCHEM_LOGP>
-3.814700000000002
> <ALOGPS_LOGS>
-2.37
> <JCHEM_MDDR_LIKE_RULE>
1
> <JCHEM_NUMBER_OF_RINGS>
6
> <JCHEM_PHYSIOLOGICAL_CHARGE>
0
> <JCHEM_PKA>
7.538782421893348
> <JCHEM_PKA_STRONGEST_ACIDIC>
6.395524282965113
> <JCHEM_PKA_STRONGEST_BASIC>
-3.6786201995914976
> <JCHEM_POLAR_SURFACE_AREA>
340.74
> <JCHEM_REFRACTIVITY>
185.56640000000007
> <JCHEM_ROTATABLE_BOND_COUNT>
11
> <JCHEM_RULE_OF_FIVE>
0
> <ALOGPS_SOLUBILITY>
3.52e+00 g/l
> <JCHEM_TRADITIONAL_IUPAC>
5,7-dihydroxy-2-(4-hydroxy-3-methoxyphenyl)-3-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-({[(2R,3S,4S,5S,6R)-3,4,5-trihydroxy-6-({[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)oxan-2-yl]oxy}methyl)oxan-2-yl]oxy}-1lambda4-chromen-1-ylium
> <JCHEM_VEBER_RULE>
0
$$$$
PDB for NP0054483 (Peonidin 3-gentiotrioside)HEADER PROTEIN 28-APR-22 NONE TITLE NULL COMPND NULL SOURCE NULL KEYWDS NULL EXPDTA NULL AUTHOR Marvin REVDAT 1 28-APR-22 0 HETATM 1 C UNK 0 -1.334 -0.770 0.000 0.00 0.00 C+0 HETATM 2 C UNK 0 -1.334 -2.310 0.000 0.00 0.00 C+0 HETATM 3 C UNK 0 0.000 -3.080 0.000 0.00 0.00 C+0 HETATM 4 C UNK 0 1.334 -2.310 0.000 0.00 0.00 C+0 HETATM 5 C UNK 0 1.334 -0.770 0.000 0.00 0.00 C+0 HETATM 6 C UNK 0 0.000 -0.000 0.000 0.00 0.00 C+0 HETATM 7 O UNK 0 2.667 -0.000 0.000 0.00 0.00 O+1 HETATM 8 C UNK 0 4.001 -0.770 0.000 0.00 0.00 C+0 HETATM 9 C UNK 0 4.001 -2.310 0.000 0.00 0.00 C+0 HETATM 10 C UNK 0 2.667 -3.080 0.000 0.00 0.00 C+0 HETATM 11 O UNK 0 5.335 -3.080 0.000 0.00 0.00 O+0 HETATM 12 C UNK 0 5.335 -4.620 0.000 0.00 0.00 C+0 HETATM 13 C UNK 0 6.668 -5.390 0.000 0.00 0.00 C+0 HETATM 14 C UNK 0 6.668 -6.930 0.000 0.00 0.00 C+0 HETATM 15 C UNK 0 5.335 -7.700 0.000 0.00 0.00 C+0 HETATM 16 C UNK 0 4.001 -6.930 0.000 0.00 0.00 C+0 HETATM 17 O UNK 0 4.001 -5.390 0.000 0.00 0.00 O+0 HETATM 18 C UNK 0 2.667 -7.700 0.000 0.00 0.00 C+0 HETATM 19 O UNK 0 2.667 -9.240 0.000 0.00 0.00 O+0 HETATM 20 C UNK 0 1.334 -10.010 0.000 0.00 0.00 C+0 HETATM 21 C UNK 0 1.334 -11.550 0.000 0.00 0.00 C+0 HETATM 22 C UNK 0 -0.000 -12.320 0.000 0.00 0.00 C+0 HETATM 23 C UNK 0 -1.334 -11.550 0.000 0.00 0.00 C+0 HETATM 24 C UNK 0 -1.334 -10.010 0.000 0.00 0.00 C+0 HETATM 25 O UNK 0 0.000 -9.240 0.000 0.00 0.00 O+0 HETATM 26 C UNK 0 -2.667 -9.240 0.000 0.00 0.00 C+0 HETATM 27 O UNK 0 -4.001 -10.010 0.000 0.00 0.00 O+0 HETATM 28 C UNK 0 -5.335 -9.240 0.000 0.00 0.00 C+0 HETATM 29 C UNK 0 -6.668 -10.010 0.000 0.00 0.00 C+0 HETATM 30 C UNK 0 -8.002 -9.240 0.000 0.00 0.00 C+0 HETATM 31 C UNK 0 -8.002 -7.700 0.000 0.00 0.00 C+0 HETATM 32 C UNK 0 -6.668 -6.930 0.000 0.00 0.00 C+0 HETATM 33 O UNK 0 -5.335 -7.700 0.000 0.00 0.00 O+0 HETATM 34 C UNK 0 -6.668 -5.390 0.000 0.00 0.00 C+0 HETATM 35 O UNK 0 -8.002 -4.620 0.000 0.00 0.00 O+0 HETATM 36 O UNK 0 -9.336 -6.930 0.000 0.00 0.00 O+0 HETATM 37 O UNK 0 -9.336 -10.010 0.000 0.00 0.00 O+0 HETATM 38 O UNK 0 -6.668 -11.550 0.000 0.00 0.00 O+0 HETATM 39 O UNK 0 -2.667 -12.320 0.000 0.00 0.00 O+0 HETATM 40 O UNK 0 -0.000 -13.860 0.000 0.00 0.00 O+0 HETATM 41 O UNK 0 2.667 -12.320 0.000 0.00 0.00 O+0 HETATM 42 O UNK 0 5.335 -9.240 0.000 0.00 0.00 O+0 HETATM 43 O UNK 0 8.002 -7.700 0.000 0.00 0.00 O+0 HETATM 44 O UNK 0 8.002 -4.620 0.000 0.00 0.00 O+0 HETATM 45 C UNK 0 5.335 -0.000 0.000 0.00 0.00 C+0 HETATM 46 C UNK 0 5.335 1.540 0.000 0.00 0.00 C+0 HETATM 47 C UNK 0 6.668 2.310 0.000 0.00 0.00 C+0 HETATM 48 C UNK 0 8.002 1.540 0.000 0.00 0.00 C+0 HETATM 49 C UNK 0 8.002 -0.000 0.000 0.00 0.00 C+0 HETATM 50 C UNK 0 6.668 -0.770 0.000 0.00 0.00 C+0 HETATM 51 O UNK 0 9.336 -0.770 0.000 0.00 0.00 O+0 HETATM 52 C UNK 0 10.669 -0.000 0.000 0.00 0.00 C+0 HETATM 53 O UNK 0 9.336 2.310 0.000 0.00 0.00 O+0 HETATM 54 O UNK 0 0.000 -4.620 0.000 0.00 0.00 O+0 HETATM 55 O UNK 0 -2.667 0.000 0.000 0.00 0.00 O+0 CONECT 1 2 6 55 CONECT 2 1 3 CONECT 3 2 4 54 CONECT 4 3 5 10 CONECT 5 4 6 7 CONECT 6 5 1 CONECT 7 5 8 CONECT 8 7 9 45 CONECT 9 8 10 11 CONECT 10 9 4 CONECT 11 9 12 CONECT 12 11 13 17 CONECT 13 12 14 44 CONECT 14 13 15 43 CONECT 15 14 16 42 CONECT 16 15 17 18 CONECT 17 16 12 CONECT 18 16 19 CONECT 19 18 20 CONECT 20 19 21 25 CONECT 21 20 22 41 CONECT 22 21 23 40 CONECT 23 22 24 39 CONECT 24 23 25 26 CONECT 25 24 20 CONECT 26 24 27 CONECT 27 26 28 CONECT 28 27 29 33 CONECT 29 28 30 38 CONECT 30 29 31 37 CONECT 31 30 32 36 CONECT 32 31 33 34 CONECT 33 32 28 CONECT 34 32 35 CONECT 35 34 CONECT 36 31 CONECT 37 30 CONECT 38 29 CONECT 39 23 CONECT 40 22 CONECT 41 21 CONECT 42 15 CONECT 43 14 CONECT 44 13 CONECT 45 8 46 50 CONECT 46 45 47 CONECT 47 46 48 CONECT 48 47 49 53 CONECT 49 48 50 51 CONECT 50 49 45 CONECT 51 49 52 CONECT 52 51 CONECT 53 48 CONECT 54 3 CONECT 55 1 MASTER 0 0 0 0 0 0 0 0 55 0 120 0 END SMILES for NP0054483 (Peonidin 3-gentiotrioside)COC1=CC(=CC=C1O)C1=[O+]C2=CC(O)=CC(O)=C2C=C1O[C@@H]1O[C@H](CO[C@@H]2O[C@H](CO[C@@H]3O[C@H](CO)[C@@H](O)[C@H](O)[C@H]3O)[C@@H](O)[C@H](O)[C@@H]2O)[C@@H](O)[C@H](O)[C@H]1O INCHI for NP0054483 (Peonidin 3-gentiotrioside)InChI=1S/C34H42O21/c1-48-17-4-11(2-3-14(17)37)31-18(7-13-15(38)5-12(36)6-16(13)51-31)52-34-30(47)27(44)24(41)21(55-34)10-50-33-29(46)26(43)23(40)20(54-33)9-49-32-28(45)25(42)22(39)19(8-35)53-32/h2-7,19-30,32-35,39-47H,8-10H2,1H3,(H2-,36,37,38)/p+1/t19-,20-,21-,22-,23-,24-,25+,26+,27+,28-,29+,30-,32-,33-,34-/m1/s1 3D Structure for NP0054483 (Peonidin 3-gentiotrioside) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Synonyms | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Chemical Formula | C34H43O21 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Average Mass | 787.6960 Da | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Monoisotopic Mass | 787.22913 Da | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IUPAC Name | 5,7-dihydroxy-2-(4-hydroxy-3-methoxyphenyl)-3-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-({[(2R,3S,4S,5S,6R)-3,4,5-trihydroxy-6-({[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)oxan-2-yl]oxy}methyl)oxan-2-yl]oxy}-1lambda4-chromen-1-ylium | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Traditional Name | 5,7-dihydroxy-2-(4-hydroxy-3-methoxyphenyl)-3-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-({[(2R,3S,4S,5S,6R)-3,4,5-trihydroxy-6-({[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)oxan-2-yl]oxy}methyl)oxan-2-yl]oxy}-1lambda4-chromen-1-ylium | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| CAS Registry Number | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SMILES | COC1=CC(=CC=C1O)C1=[O+]C2=CC(O)=CC(O)=C2C=C1O[C@@H]1O[C@H](CO[C@@H]2O[C@H](CO[C@@H]3O[C@H](CO)[C@@H](O)[C@H](O)[C@H]3O)[C@@H](O)[C@H](O)[C@@H]2O)[C@@H](O)[C@H](O)[C@H]1O | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| InChI Identifier | InChI=1S/C34H42O21/c1-48-17-4-11(2-3-14(17)37)31-18(7-13-15(38)5-12(36)6-16(13)51-31)52-34-30(47)27(44)24(41)21(55-34)10-50-33-29(46)26(43)23(40)20(54-33)9-49-32-28(45)25(42)22(39)19(8-35)53-32/h2-7,19-30,32-35,39-47H,8-10H2,1H3,(H2-,36,37,38)/p+1/t19-,20-,21-,22-,23-,24-,25+,26+,27+,28-,29+,30-,32-,33-,34-/m1/s1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| InChI Key | GIPOLQTYBBGBER-VDHCEEFESA-O | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Spectra | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Predicted Spectra | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Chemical Shift Submissions | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species of Origin |
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| Chemical Taxonomy | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Classification | Not classified | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Physical Properties | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| State | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Properties |
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| Predicted Properties |
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| External Links | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| External Links | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| References | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| General References | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||