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Record Information
Version2.0
Created at2022-04-27 23:17:58 UTC
Updated at2022-04-27 23:17:58 UTC
NP-MRD IDNP0052133
Secondary Accession NumbersNone
Natural Product Identification
Common NameCalotropin
DescriptionCalotropin, also known as pecilocerin a, belongs to the class of organic compounds known as cardenolide glycosides and derivatives. Cardenolide glycosides and derivatives are compounds containing a carbohydrate glycosidically bound to the cardenolide moiety. Thus, calotropin is considered to be a sterol. Calotropin is found in Asclepias curassavica L. , Gomphocarpus fruticosus, Asclepias linaria, Asclepias subulata, Asclepias vestita, Calotropis gigantea , Calotropis procera , Danaus plexippus, Gomphocarpus sinaicus and Thymus vulgaris. Calotropin was first documented in 2020 (PMID: 33841525). Based on a literature review a significant number of articles have been published on Calotropin (PMID: 33850021) (PMID: 33292137) (PMID: 34563976) (PMID: 34343190) (PMID: 33770827) (PMID: 32999172).
Structure
Thumb
Synonyms
ValueSource
Pecilocerin aMeSH
Pekilocerin aMeSH
Chemical FormulaC29H40O9
Average Mass532.6300 Da
Monoisotopic Mass532.26723 Da
IUPAC Name(1S,3R,5S,7R,9S,10S,12R,14R,15S,18R,19R,22S,23R)-9,10,22-trihydroxy-7,18-dimethyl-19-(5-oxo-2,5-dihydrofuran-3-yl)-4,6,11-trioxahexacyclo[12.11.0.0^{3,12}.0^{5,10}.0^{15,23}.0^{18,22}]pentacosane-14-carbaldehyde
Traditional Name(1S,3R,5S,7R,9S,10S,12R,14R,15S,18R,19R,22S,23R)-9,10,22-trihydroxy-7,18-dimethyl-19-(5-oxo-2H-furan-3-yl)-4,6,11-trioxahexacyclo[12.11.0.0^{3,12}.0^{5,10}.0^{15,23}.0^{18,22}]pentacosane-14-carbaldehyde
CAS Registry NumberNot Available
SMILES
C[C@@H]1C[C@H](O)[C@]2(O)O[C@@H]3C[C@@]4(C=O)[C@@H](CC[C@@H]5[C@@H]4CC[C@]4(C)[C@H](CC[C@]54O)C4=CC(=O)OC4)C[C@H]3O[C@@H]2O1
InChI Identifier
InChI=1S/C29H40O9/c1-15-9-23(31)29(34)25(36-15)37-21-11-17-3-4-20-19(27(17,14-30)12-22(21)38-29)5-7-26(2)18(6-8-28(20,26)33)16-10-24(32)35-13-16/h10,14-15,17-23,25,31,33-34H,3-9,11-13H2,1-2H3/t15-,17+,18-,19+,20-,21-,22-,23+,25+,26-,27-,28+,29+/m1/s1
InChI KeyOWPWFVVPBYFKBG-NYVHBPEFSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Asclepias curassavicaPlant
Asclepias fruticosaLOTUS Database
Asclepias linariaLOTUS Database
Asclepias subulataLOTUS Database
Asclepias vestitaLOTUS Database
Calotropis giganteaPlant
Calotropis proceraPlant
Danaus plexippusLOTUS Database
Gomphocarpus sinaicusLOTUS Database
Thymus vulgarisLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as cardenolide glycosides and derivatives. Cardenolide glycosides and derivatives are compounds containing a carbohydrate glycosidically bound to the cardenolide moiety.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassSteroid lactones
Direct ParentCardenolide glycosides and derivatives
Alternative Parents
Substituents
  • Cardanolide-glycoside
  • 19-oxosteroid
  • 14-hydroxysteroid
  • Hydroxysteroid
  • Oxosteroid
  • Para-dioxane
  • 2-furanone
  • Oxane
  • Cyclic alcohol
  • Dihydrofuran
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Tertiary alcohol
  • Carboxylic acid ester
  • Hemiacetal
  • Secondary alcohol
  • Lactone
  • Acetal
  • Organoheterocyclic compound
  • Oxacycle
  • Carboxylic acid derivative
  • Polyol
  • Monocarboxylic acid or derivatives
  • Alcohol
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Carbonyl group
  • Organic oxide
  • Aldehyde
  • Organooxygen compound
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.05ALOGPS
logP1.96ChemAxon
logS-3.5ALOGPS
pKa (Strongest Acidic)7.18ChemAxon
pKa (Strongest Basic)0.27ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count8ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area131.75 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity133.52 m³·mol⁻¹ChemAxon
Polarizability56.78 ųChemAxon
Number of Rings7ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00003609
Chemspider ID15326
KEGG Compound IDC08855
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkCalotropin
METLIN IDNot Available
PubChem Compound16142
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Agrawal AA, Boroczky K, Haribal M, Hastings AP, White RA, Jiang RW, Duplais C: Cardenolides, toxicity, and the costs of sequestration in the coevolutionary interaction between monarchs and milkweeds. Proc Natl Acad Sci U S A. 2021 Apr 20;118(16). pii: 2024463118. doi: 10.1073/pnas.2024463118. [PubMed:33850021 ]
  2. Parthasarathy V, Menon AR, Devaranavadagi B: Target Fishing of Calactin, Calotropin and Calotoxin Using Reverse Pharmacophore Screening and Consensus Inverse Docking Approach. Curr Drug Discov Technol. 2021;18(6):e130921188782. doi: 10.2174/1570163817666201207143958. [PubMed:33292137 ]
  3. He YL, Yang HY, Huang PZ, Feng WJ, Gao K: Cytotoxic cardenolides from Calotropis gigantea. Phytochemistry. 2021 Dec;192:112951. doi: 10.1016/j.phytochem.2021.112951. Epub 2021 Sep 24. [PubMed:34563976 ]
  4. Winitchaikul T, Sawong S, Surangkul D, Srikummool M, Somran J, Pekthong D, Kamonlakorn K, Nangngam P, Parhira S, Srisawang P: Calotropis gigantea stem bark extract induced apoptosis related to ROS and ATP production in colon cancer cells. PLoS One. 2021 Aug 3;16(8):e0254392. doi: 10.1371/journal.pone.0254392. eCollection 2021. [PubMed:34343190 ]
  5. Sewidan N, Abu Khalaf R, Mohammad H, Hammad W: In-Vitro Studies on Selected Jordanian Plants as Dipeptidyl Peptidase-IV Inhibitors for Management of Diabetes Mellitus. Iran J Pharm Res. 2020 Fall;19(4):95-102. doi: 10.22037/ijpr.2020.1101232. [PubMed:33841525 ]
  6. Sweidan N, Esawi E, Ismail M, Alshaer W: Anticancer Cardenolides from the aerial parts of Calortopis procera. Z Naturforsch C J Biosci. 2021 Mar 29;76(5-6):243-250. doi: 10.1515/znc-2020-0281. Print 2021 May 26. [PubMed:33770827 ]
  7. Nakano D, Ishitsuka K, Takashima M, Arima R, Satou A, Tsuchihashi R, Okawa M, Tamura K, Kinjo J: Screening of Promising Chemotherapeutic Candidates from Plants against Human Adult T-Cell Leukemia/Lymphoma (VI): Cardenolides from Asclepias curassavica. Biol Pharm Bull. 2020;43(10):1609-1614. doi: 10.1248/bpb.b20-00465. [PubMed:32999172 ]
  8. Abebe B, Emire S: Manufacture of fresh cheese using east African Calotropis procera leaves extract crude enzyme as milk coagulant. Food Sci Nutr. 2020 Aug 13;8(9):4831-4842. doi: 10.1002/fsn3.1765. eCollection 2020 Sep. [PubMed:32994945 ]
  9. Kowalski P, Baum M, Korten M, Donath A, Dobler S: ABCB transporters in a leaf beetle respond to sequestered plant toxins. Proc Biol Sci. 2020 Sep 9;287(1934):20201311. doi: 10.1098/rspb.2020.1311. Epub 2020 Sep 2. [PubMed:32873204 ]
  10. Pederson PJ, Cai S, Carver C, Powell DR, Risinger AL, Grkovic T, O'Keefe BR, Mooberry SL, Cichewicz RH: Triple-Negative Breast Cancer Cells Exhibit Differential Sensitivity to Cardenolides from Calotropis gigantea. J Nat Prod. 2020 Jul 24;83(7):2269-2280. doi: 10.1021/acs.jnatprod.0c00423. Epub 2020 Jul 10. [PubMed:32649211 ]