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Record Information
Version2.0
Created at2022-04-27 22:53:32 UTC
Updated at2022-04-27 22:53:32 UTC
NP-MRD IDNP0051582
Secondary Accession NumbersNone
Natural Product Identification
Common NameAloe emodin
DescriptionAloeemodin, also known as rhabarberone, belongs to the class of organic compounds known as anthraquinones. These are organic compounds containing either anthracene-9,10-quinone, 1,4-anthraquinone, or 1,2-anthraquinone. Thus, aloeemodin is considered to be an aromatic polyketide lipid molecule. Aloeemodin is a very hydrophobic molecule, practically insoluble (in water), and relatively neutral. Outside of the human body, Aloeemodin has been detected, but not quantified in, green vegetables. Aloe emodin is found in Aloe arborescens , Aloe berhana, Aloe castellorum, Aloe elgonica, Aloe ferox , Aloe marlothii , Aloe megalacantha, Aloe pulcherrima , Aloe rivae, Aloe spp. , Aloe striata, Aloe succotrina, Aloe turkanensis, Aloe barbadensis , Aloe vera var.chinensis , Asphodelus aestivus, Asphodelus albus, Asphodelus fistulosus, Asphodelus microcarpus , Berchemia floribunda , Callisia fragrans, Cassia acutifolia , Cassia angustifolia , Cassia grandis , Cassia javanica, Cassia mimosoides , Cassia occidentalis , Cassia senna , Cassia tora , Frangula alnus, Isatis indigotica , Kniphofia isoetifolia, Oroxylum indicum , Pheum palmatum, Picramnia antidesma , Picramnia hirsuta, Rhamnus alaternus , Rhamnus davurica, Rhamnus purshiana , Rhamnus purshianus bark, Rheum emodi , Rheum kialense, Rheum officinale , Rheum palmatum , Rheum rhabarbarum, Rheum spp., Rheum tanguticum , Rheum undulatum , Rumex cristatus, Rumex dentatus , Rumex patientia , Rumex scutatus , Selaginella delicatula, Senna alata, Senna alexandrina, Senna didymobotrya, Cassia obtusifolia , Senna petersiana, Senna reticulata, Spatholobus suberectus, Tectona grandis and Xanthorrhoea australis . Aloe emodin was first documented in 2013 (PMID: 22931417). This could make aloeemodin a potential biomarker for the consumption of these foods (PMID: 24685589) (PMID: 24707862).
Structure
Thumb
Synonyms
ValueSource
1,8-Dihydroxy-3-hydroxymethylanthraquinoneChEBI
3-(Hydroxymethyl)chrysazinChEBI
Aloe-emodinChEBI
RhabarberoneChEBI
AloeemodinChEBI
1,8-Dihydroxy-3-(hydroxymethyl)-9,10-anthracenedioneHMDB
1,8-Dihydroxy-3-(hydroxymethyl)anthra-9,10-quinoneHMDB
1,8-Dihydroxy-3-(hydroxymethyl)anthraquinoneHMDB
1,8-Dihydroxy-3-hydroxymethyl-9,10-anthracenedione, 9ciHMDB
1,8-Dihydroxy-3-hydroxymethyl-anthraquinoneHMDB
3-HydroxymethylchrysazineHMDB
Rottlerin?HMDB
Aloe emodinMeSH
Chemical FormulaC15H10O5
Average Mass270.2369 Da
Monoisotopic Mass270.05282 Da
IUPAC Name1,8-dihydroxy-3-(hydroxymethyl)-9,10-dihydroanthracene-9,10-dione
Traditional Namealoe emodin
CAS Registry NumberNot Available
SMILES
OCC1=CC2=C(C(O)=C1)C(=O)C1=C(C=CC=C1O)C2=O
InChI Identifier
InChI=1S/C15H10O5/c16-6-7-4-9-13(11(18)5-7)15(20)12-8(14(9)19)2-1-3-10(12)17/h1-5,16-18H,6H2
InChI KeyYDQWDHRMZQUTBA-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Aloe arborescensPlant
Aloe berhanaPlant
Aloe castellorumLOTUS Database
Aloe elgonicaPlant
Aloe feroxPlant
Aloe marlothiiPlant
Aloe megalacanthaPlant
Aloe pulcherrimaPlant
Aloe rivaePlant
Aloe spp.Plant
Aloe striataPlant
Aloe succotrinaLOTUS Database
Aloe turkanensisPlant
Aloe veraPlant
Aloe vera var.chinensisPlant
Asphodelus aestivusLOTUS Database
Asphodelus albusLOTUS Database
Asphodelus fistulosusLOTUS Database
Asphodelus microcarpusPlant
Berchemia floribundaPlant
Callisia fragransLOTUS Database
Cassia acutifoliaPlant
Cassia angustifoliaPlant
Cassia grandisPlant
Cassia javanicaLOTUS Database
Cassia mimosoidesPlant
Cassia occidentalisPlant
Cassia sennaPlant
Cassia toraPlant
Frangula alnusLOTUS Database
Isatis tinctoriaPlant
Kniphofia isoetifoliaLOTUS Database
Oroxylum indicumPlant
Pheum palmatum-
Picramnia antidesmaPlant
Picramnia hirsutaLOTUS Database
Rhamnus alaternusPlant
Rhamnus davuricaPlant
Rhamnus purshianaPlant
Rhamnus purshianus barkPlant
Rheum australePlant
Rheum kialenseLOTUS Database
Rheum officinalePlant
Rheum palmatumPlant
Rheum rhabarbarumLOTUS Database
Rheum spp.Plant
Rheum tanguticumPlant
Rheum undulatumPlant
Rumex cristatusLOTUS Database
Rumex dentatusPlant
Rumex patientiaPlant
Rumex scutatusPlant
Selaginella delicatulaLOTUS Database
Senna alataLOTUS Database
Senna alexandrinaLOTUS Database
Senna didymobotryaLOTUS Database
Senna obtusifoliaPlant
Senna petersianaLOTUS Database
Senna reticulataLOTUS Database
Spatholobus suberectusLOTUS Database
Tectona grandisPlant
Xanthorrhoea australisPlant
Chemical Taxonomy
Description Belongs to the class of organic compounds known as anthraquinones. These are organic compounds containing either anthracene-9,10-quinone, 1,4-anthraquinone, or 1,2-anthraquinone.
KingdomOrganic compounds
Super ClassBenzenoids
ClassAnthracenes
Sub ClassAnthraquinones
Direct ParentAnthraquinones
Alternative Parents
Substituents
  • Anthraquinone
  • 9,10-anthraquinone
  • Aryl ketone
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Vinylogous acid
  • Ketone
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Aromatic alcohol
  • Primary alcohol
  • Organooxygen compound
  • Alcohol
  • Aromatic homopolycyclic compound
Molecular FrameworkAromatic homopolycyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP2.39ALOGPS
logP2.84ChemAxon
logS-3ALOGPS
pKa (Strongest Acidic)9ChemAxon
pKa (Strongest Basic)-2.9ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area94.83 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity71.93 m³·mol⁻¹ChemAxon
Polarizability26.51 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDHMDB0030829
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDFDB002785
KNApSAcK IDC00002789
Chemspider IDNot Available
KEGG Compound IDC10294
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkAloe_emodin
METLIN IDNot Available
PubChem Compound10207
PDB IDNot Available
ChEBI ID2607
Good Scents IDNot Available
References
General References
  1. Lu JJ, Bao JL, Wu GS, Xu WS, Huang MQ, Chen XP, Wang YT: Quinones derived from plant secondary metabolites as anti-cancer agents. Anticancer Agents Med Chem. 2013 Mar;13(3):456-63. [PubMed:22931417 ]
  2. Hu B, Zhang H, Meng X, Wang F, Wang P: Aloe-emodin from rhubarb (Rheum rhabarbarum) inhibits lipopolysaccharide-induced inflammatory responses in RAW264.7 macrophages. J Ethnopharmacol. 2014 May 14;153(3):846-53. doi: 10.1016/j.jep.2014.03.059. Epub 2014 Mar 29. [PubMed:24685589 ]
  3. Chen R, Zhang J, Hu Y, Wang S, Chen M, Wang Y: Potential antineoplastic effects of Aloe-emodin: a comprehensive review. Am J Chin Med. 2014;42(2):275-88. doi: 10.1142/S0192415X14500189. [PubMed:24707862 ]