Np mrd loader

Record Information
Version2.0
Created at2022-04-27 22:30:02 UTC
Updated at2022-04-27 22:30:02 UTC
NP-MRD IDNP0051056
Secondary Accession NumbersNone
Natural Product Identification
Common Name(-)-Phlegmarine
DescriptionPhlegmarine belongs to the class of organic compounds known as quinolidines. These are organic compounds containing a quinolidine or decahydroquinoline moiety, which is a bicyclic skeleton consisting of a piperidine fused to a cyclohexane ring. (-)-Phlegmarine is found in Huperzia serrata , Lycopodiastrum casuarinoides, Palhinhaea cernua, Lycopodium phlegmaria and Lycopodium annotinum. (-)-Phlegmarine was first documented in 2016 (PMID: 26871307). Based on a literature review a small amount of articles have been published on Phlegmarine (PMID: 30928888) (PMID: 31181922) (PMID: 29947225) (PMID: 28322567).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC16H30N2
Average Mass250.4300 Da
Monoisotopic Mass250.24090 Da
IUPAC Name(4aR,5S,7R,8aR)-7-methyl-5-{[(2S)-piperidin-2-yl]methyl}-decahydroquinoline
Traditional Namephlegmarine
CAS Registry NumberNot Available
SMILES
C[C@@H]1C[C@@H](C[C@@H]2CCCCN2)[C@H]2CCCN[C@@H]2C1
InChI Identifier
InChI=1S/C16H30N2/c1-12-9-13(11-14-5-2-3-7-17-14)15-6-4-8-18-16(15)10-12/h12-18H,2-11H2,1H3/t12-,13+,14+,15-,16-/m1/s1
InChI KeyHLJWSLBSLJLQBA-LYYZXLFJSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Huperzia serrataPlant
Lycopodiastrum casuarinoides-
Palhinhaea cernua-
Phlegmariurus phlegmariaPlant
Spinulum annotinumPlant
Chemical Taxonomy
Description Belongs to the class of organic compounds known as quinolidines. These are organic compounds containing a quinolidine or decahydroquinoline moiety, which is a bicyclic skeleton consisting of a piperidine fused to a cyclohexane ring.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassQuinolidines
Sub ClassNot Available
Direct ParentQuinolidines
Alternative Parents
Substituents
  • Quinolidine
  • Piperidine
  • Azacycle
  • Secondary amine
  • Secondary aliphatic amine
  • Organic nitrogen compound
  • Organopnictogen compound
  • Hydrocarbon derivative
  • Organonitrogen compound
  • Amine
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.06ALOGPS
logP2.76ChemAxon
logS-4.7ALOGPS
pKa (Strongest Basic)10.94ChemAxon
Physiological Charge2ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area24.06 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity76.92 m³·mol⁻¹ChemAxon
Polarizability31.5 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00001954
Chemspider ID390922
KEGG Compound IDC09892
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound442494
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Xiong J, Meng WJ, Zhang HY, Zou Y, Wang WX, Wang XY, Yang QL, Osman EEA, Hu JF: Lycofargesiines A-F, further Lycopodium alkaloids from the club moss Huperzia fargesii. Phytochemistry. 2019 Jun;162:183-192. doi: 10.1016/j.phytochem.2019.03.015. Epub 2019 Mar 29. [PubMed:30928888 ]
  2. Bosch C, Bradshaw B, Bonjoch J: Decahydroquinoline Ring (13)C NMR Spectroscopic Patterns for the Stereochemical Elucidation of Phlegmarine-Type Lycopodium Alkaloids: Synthesis of (-)-Serralongamine A and Structural Reassignment and Synthesis of (-)-Huperzine K and (-)-Huperzine M (Lycoposerramine Y). J Nat Prod. 2019 Jun 28;82(6):1576-1586. doi: 10.1021/acs.jnatprod.9b00071. Epub 2019 Jun 5. [PubMed:31181922 ]
  3. Pinto A, Picciche M, Griera R, Molins E, Bosch J, Amat M: Studies on the Synthesis of Phlegmarine-Type Lycopodium Alkaloids: Enantioselective Synthesis of (-)-Cermizine B, (+)-Serratezomine E, and (+)-Luciduline. J Org Chem. 2018 Aug 3;83(15):8364-8375. doi: 10.1021/acs.joc.8b00983. Epub 2018 Jul 10. [PubMed:29947225 ]
  4. Pinto A, Griera R, Molins E, Fernandez I, Bosch J, Amat M: Access to Enantiopure 5-, 7-, and 5,7-Substituted cis-Decahydroquinolines: Enantioselective Synthesis of (-)-Cermizine B. Org Lett. 2017 Apr 7;19(7):1714-1717. doi: 10.1021/acs.orglett.7b00492. Epub 2017 Mar 21. [PubMed:28322567 ]
  5. Zhang LD, Zhong LR, Xi J, Yang XL, Yao ZJ: Enantioselective Total Synthesis of Lycoposerramine-Z Using Chiral Phosphoric Acid Catalyzed Intramolecular Michael Addition. J Org Chem. 2016 Mar 4;81(5):1899-904. doi: 10.1021/acs.joc.5b02723. Epub 2016 Feb 22. [PubMed:26871307 ]