| Record Information |
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| Version | 2.0 |
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| Created at | 2022-04-27 22:29:43 UTC |
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| Updated at | 2022-04-27 22:29:43 UTC |
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| NP-MRD ID | NP0051049 |
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| Secondary Accession Numbers | None |
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| Natural Product Identification |
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| Common Name | (-)-Lycodine |
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| Description | Lycodine belongs to the class of organic compounds known as phenanthrolines. These are aromatic polycyclic compounds containing the phenanthroline skeleton, which is a derivative of phenanthrene, and consists of two pyridine rings non-linearly joined by a benzene ring. (-)-Lycodine is found in Austrolycopodium fastigiatum, Austrolycopodium magellanicum, Dendrolycopodium obscurum, Diphasiastrum tristachyum, Huperzia lucidula, Huperzia serrata , Lycopodiastrum casuarinoides, Lycopodium australianum, Lycopodium clavatum var. borbonicum , Lycopodium deuterodensum, Lycopodium fastigiatum, Lycopodium fawcettii, Lycopodium flabelliforme, Lycopodium lucidulum, Lycopodium magellanicum, Lycopodium obscurum, Lycopodium serratum var. serratum f. intermedium, Lycopodium serratum var. serratum f. serratum, Lycopodium serratum var. thunbergii, Lycopodium tristachyum, Palhinhaea cernua, Lycopodium phlegmaria and Lycopodium annotinum. (-)-Lycodine was first documented in 2019 (PMID: 31676395). Based on a literature review a small amount of articles have been published on Lycodine (PMID: 32009077) (PMID: 34570487) (PMID: 34368579) (PMID: 33729783). |
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| Structure | C[C@@H]1C[C@H]2CC3=NC=CC=C3[C@]3(C1)NCCC[C@H]23 InChI=1S/C16H22N2/c1-11-8-12-9-15-14(5-2-6-17-15)16(10-11)13(12)4-3-7-18-16/h2,5-6,11-13,18H,3-4,7-10H2,1H3/t11-,12+,13-,16-/m1/s1 |
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| Synonyms | Not Available |
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| Chemical Formula | C16H22N2 |
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| Average Mass | 242.3660 Da |
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| Monoisotopic Mass | 242.17830 Da |
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| IUPAC Name | (1R,9S,10R,16R)-16-methyl-6,14-diazatetracyclo[7.5.3.0^{1,10}.0^{2,7}]heptadeca-2,4,6-triene |
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| Traditional Name | (1R,9S,10R,16R)-16-methyl-6,14-diazatetracyclo[7.5.3.0^{1,10}.0^{2,7}]heptadeca-2,4,6-triene |
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| CAS Registry Number | Not Available |
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| SMILES | C[C@@H]1C[C@H]2CC3=NC=CC=C3[C@]3(C1)NCCC[C@H]23 |
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| InChI Identifier | InChI=1S/C16H22N2/c1-11-8-12-9-15-14(5-2-6-17-15)16(10-11)13(12)4-3-7-18-16/h2,5-6,11-13,18H,3-4,7-10H2,1H3/t11-,12+,13-,16-/m1/s1 |
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| InChI Key | JJPMUZRSJKMFRK-OQMKEHIESA-N |
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| Experimental Spectra |
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| Not Available | | Predicted Spectra |
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| | Spectrum Type | Description | Depositor ID | Depositor Organization | Depositor | Deposition Date | View |
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| 1D NMR | 13C NMR Spectrum (1D, 25 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 100 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 252 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 50 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 200 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 75 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 300 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 101 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 400 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 126 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 500 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 151 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 600 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 176 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 700 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 201 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 800 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 226 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 900 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum |
| | Chemical Shift Submissions |
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| Not Available | | Species |
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| Species of Origin | |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as phenanthrolines. These are aromatic polycyclic compounds containing the phenanthroline skeleton, which is a derivative of phenanthrene, and consists of two pyridine rings non-linearly joined by a benzene ring. |
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| Kingdom | Organic compounds |
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| Super Class | Organoheterocyclic compounds |
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| Class | Phenanthrolines |
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| Sub Class | Not Available |
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| Direct Parent | Phenanthrolines |
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| Alternative Parents | |
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| Substituents | - 1,7-phenanthroline
- Quinolidine
- Aralkylamine
- Pyridine
- Piperidine
- Heteroaromatic compound
- Azacycle
- Secondary amine
- Secondary aliphatic amine
- Organic nitrogen compound
- Organopnictogen compound
- Hydrocarbon derivative
- Organonitrogen compound
- Amine
- Aromatic heteropolycyclic compound
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| Molecular Framework | Aromatic heteropolycyclic compounds |
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| External Descriptors | |
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| Physical Properties |
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| State | Not Available |
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| Experimental Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Predicted Properties | |
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| General References | - Takayama H: Total Syntheses of Lycopodium and Monoterpenoid Indole Alkaloids Based on Biosynthesis-Inspired Strategies. Chem Pharm Bull (Tokyo). 2020;68(2):103-116. doi: 10.1248/cpb.c19-00872. [PubMed:32009077 ]
- Ma D, Martin BS, Gallagher KS, Saito T, Dai M: One-Carbon Insertion and Polarity Inversion Enabled a Pyrrole Strategy to the Total Syntheses of Pyridine-Containing Lycopodium Alkaloids: Complanadine A and Lycodine. J Am Chem Soc. 2021 Oct 13;143(40):16383-16387. doi: 10.1021/jacs.1c08626. Epub 2021 Sep 27. [PubMed:34570487 ]
- Anukanon S, Pongpamorn P, Tiyabhorn W, Chatwichien J, Niwetmarin W, Sessions RB, Ruchirawat S, Thasana N: In Silico-Guided Rational Drug Design and Semi-synthesis of C(2)-Functionalized Huperzine A Derivatives as Acetylcholinesterase Inhibitors. ACS Omega. 2021 Jul 26;6(30):19924-19939. doi: 10.1021/acsomega.1c02875. eCollection 2021 Aug 3. [PubMed:34368579 ]
- Haley HMS, Payer SE, Papidocha SM, Clemens S, Nyenhuis J, Sarpong R: Bioinspired Diversification Approach Toward the Total Synthesis of Lycodine-Type Alkaloids. J Am Chem Soc. 2021 Mar 31;143(12):4732-4740. doi: 10.1021/jacs.1c00457. Epub 2021 Mar 17. [PubMed:33729783 ]
- Feng Z, Chen S, Wang W, Feng L, Dong Y, Zou Y, Ke C, Tang C, Yao S, Zhang H, Gan L, Ye Y, Lin L: Lycodine-type alkaloids from Lycopodiastrum casuarinoides and their acetylcholinesterase inhibitory activity. Fitoterapia. 2019 Nov;139:104378. doi: 10.1016/j.fitote.2019.104378. Epub 2019 Oct 30. [PubMed:31676395 ]
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