Np mrd loader

Record Information
Version2.0
Created at2022-04-27 22:20:58 UTC
Updated at2022-04-27 22:20:58 UTC
NP-MRD IDNP0050887
Secondary Accession NumbersNone
Natural Product Identification
Common Name(-)-Mesembrine
DescriptionMesembrine belongs to the class of organic compounds known as phenylpyrrolidines. These are polycyclic aromatic compounds containing a benzene ring linked to a pyrrolidine ring through a CC or CN bond. Pyrrolidine is a five-membered saturated aliphatic heterocycle with one nitrogen atom and four carbon atoms. (-)-Mesembrine is found in Mesembryanthemum anatomicum , Mesembryanthemum expansum, Mesembryanthemum ladismithiense, Mesembryanthemum tortuosum , Oscularia deltoides, Scaveola namaquense, Sceletium anatomicum, Sceletium namaquense and Sceletium stricum. (-)-Mesembrine was first documented in 2022 (PMID: 35425789). Based on a literature review a small amount of articles have been published on Mesembrine (PMID: 35134486) (PMID: 34758918) (PMID: 34750996) (PMID: 34454055).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC17H23NO3
Average Mass289.3750 Da
Monoisotopic Mass289.16779 Da
IUPAC Name(3aS,7aS)-3a-(3,4-dimethoxyphenyl)-1-methyl-octahydro-1H-indol-6-one
Traditional Namemesembrine
CAS Registry NumberNot Available
SMILES
COC1=C(OC)C=C(C=C1)[C@]12CCN(C)[C@H]1CC(=O)CC2
InChI Identifier
InChI=1S/C17H23NO3/c1-18-9-8-17(7-6-13(19)11-16(17)18)12-4-5-14(20-2)15(10-12)21-3/h4-5,10,16H,6-9,11H2,1-3H3/t16-,17-/m0/s1
InChI KeyDAHIQPJTGIHDGO-IRXDYDNUSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Mesembryanthemum anatomicumPlant
Mesembryanthemum expansumPlant
Mesembryanthemum ladismithienseLOTUS Database
Mesembryanthemum tortuosumPlant
Oscularia deltoidesLOTUS Database
Scaveola namaquense-
Sceletium anatomicumPlant
Sceletium namaquensePlant
Sceletium stricumPlant
Chemical Taxonomy
Description Belongs to the class of organic compounds known as phenylpyrrolidines. These are polycyclic aromatic compounds containing a benzene ring linked to a pyrrolidine ring through a CC or CN bond. Pyrrolidine is a five-membered saturated aliphatic heterocycle with one nitrogen atom and four carbon atoms.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassPyrrolidines
Sub ClassPhenylpyrrolidines
Direct ParentPhenylpyrrolidines
Alternative Parents
Substituents
  • 3-phenylpyrrolidine
  • Dimethoxybenzene
  • O-dimethoxybenzene
  • Indole or derivatives
  • Anisole
  • Phenol ether
  • Phenoxy compound
  • Methoxybenzene
  • Aralkylamine
  • Alkyl aryl ether
  • Monocyclic benzene moiety
  • Benzenoid
  • N-alkylpyrrolidine
  • Pyrrole
  • Cyclic ketone
  • Tertiary aliphatic amine
  • Tertiary amine
  • Ketone
  • Azacycle
  • Ether
  • Organic oxide
  • Organonitrogen compound
  • Organooxygen compound
  • Organic nitrogen compound
  • Amine
  • Carbonyl group
  • Organic oxygen compound
  • Organopnictogen compound
  • Hydrocarbon derivative
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.79ALOGPS
logP2.05ChemAxon
logS-2.7ALOGPS
pKa (Strongest Acidic)17.84ChemAxon
pKa (Strongest Basic)8.21ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area38.77 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity81.65 m³·mol⁻¹ChemAxon
Polarizability32.08 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00001749
Chemspider ID349381
KEGG Compound IDC09224
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkMesembrine
METLIN IDNot Available
PubChem Compound394162
PDB IDNot Available
ChEBI ID6778
Good Scents IDNot Available
References
General References
  1. Reddy K, Stander MA, Stafford GI, Makunga NP: Mass Spectrometry Metabolomics and Feature-Based Molecular Networking Reveals Population-Specific Chemistry in Some Species of the Sceletium Genus. Front Nutr. 2022 Mar 29;9:819753. doi: 10.3389/fnut.2022.819753. eCollection 2022. [PubMed:35425789 ]
  2. Maphanga VB, Skalicka-Wozniak K, Budzynska B, Skiba A, Chen W, Agoni C, Enslin GM, Viljoen AM: Mesembryanthemum tortuosum L. alkaloids modify anxiety-like behaviour in a zebrafish model. J Ethnopharmacol. 2022 May 23;290:115068. doi: 10.1016/j.jep.2022.115068. Epub 2022 Feb 5. [PubMed:35134486 ]
  3. Olatunji TL, Siebert F, Adetunji AE, Harvey BH, Gericke J, Hamman JH, Van der Kooy F: Sceletium tortuosum: A review on its phytochemistry, pharmacokinetics, biological, pre-clinical and clinical activities. J Ethnopharmacol. 2022 Apr 6;287:114711. doi: 10.1016/j.jep.2021.114711. Epub 2021 Nov 8. [PubMed:34758918 ]
  4. Appley MG, Chambers MI, Musah RA: Quantification of hordenine in a complex plant matrix by direct analysis in real time-high-resolution mass spectrometry: Application to the "plant of concern" Sceletium tortuosum. Drug Test Anal. 2022 Apr;14(4):604-612. doi: 10.1002/dta.3193. Epub 2021 Nov 24. [PubMed:34750996 ]
  5. Gericke J, Lekhooa M, Steyn SF, Viljoen AM, Harvey BH: An acute dose-ranging evaluation of the antidepressant properties of Sceletium tortuosum (Zembrin(R)) versus escitalopram in the Flinders Sensitive Line rat. J Ethnopharmacol. 2022 Feb 10;284:114550. doi: 10.1016/j.jep.2021.114550. Epub 2021 Aug 25. [PubMed:34454055 ]