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Record Information
Version2.0
Created at2022-04-27 22:15:41 UTC
Updated at2022-04-27 22:15:41 UTC
NP-MRD IDNP0050853
Secondary Accession NumbersNone
Natural Product Identification
Common NameChanoclavine-1
DescriptionChanoclavine-I belongs to the class of organic compounds known as clavines and derivatives. These are hydroxy and dehydro derivatives of 6,8-dimethylergolenes and the corresponding ergolines. Chanoclavine-I is a primary metabolite. Primary metabolites are metabolically or physiologically essential metabolites. They are directly involved in an organism’s growth, development or reproduction. Chanoclavine-1 is found in Acremonium coenophialum, Agropyrum spp., Argyreia nervosa , Aspergillus fumigatus, Aspergullus fumigatus, Bakabsua obtecta B249, Balansia claviceps, Balansia epichloe, Balansia henningsiana, Balansia strangulans, Claviceps africana, Claviceps fusiformis PRL1980, Claviceps gigantea, Claviceps paspali, Claviceps purpurea , Elymus spp., Epichloe elymi, Epichloe festucae Fl1, Epichloe inebrians e818, Epichloe typhina, Ipomoea argyrophylla, Ipomoea asarifolia , Ipomoea corymbosa, Ipomoea nil, Ipomoea tricolor, Ipomoea violacea, Neosortorya fumigata Af293, Neotyphodium gansuense, Penicillium commune, Pennisetum typhoideum , Periglandula ipomoeae lasaF13, Phalaris sp. and Phragmites sp.. Chanoclavine-1 was first documented in 2017 (PMID: 28902217). Based on a literature review a small amount of articles have been published on chanoclavine-I (PMID: 29235356) (PMID: 32936061) (PMID: 30076193) (PMID: 28714687).
Structure
Thumb
Synonyms
ValueSource
Chanoclavin-IChEBI
ChanoclavineChEBI
(4R-(4alpha,5alpha(e)))-Isomer OF chanoclavineMeSH
(4R-(4alpha,5beta(Z)))-Isomer OF chanoclavineMeSH
IsochanoclavinMeSH
Chemical FormulaC16H20N2O
Average Mass256.3490 Da
Monoisotopic Mass256.15756 Da
IUPAC Name(2E)-2-methyl-3-[(6R,7R)-6-(methylamino)-2-azatricyclo[6.3.1.0^{4,12}]dodeca-1(11),3,8(12),9-tetraen-7-yl]prop-2-en-1-ol
Traditional Name(2E)-2-methyl-3-[(6R,7R)-6-(methylamino)-2-azatricyclo[6.3.1.0^{4,12}]dodeca-1(11),3,8(12),9-tetraen-7-yl]prop-2-en-1-ol
CAS Registry NumberNot Available
SMILES
CN[C@@H]1CC2=CNC3=CC=CC([C@H]1\C=C(/C)CO)=C23
InChI Identifier
InChI=1S/C16H20N2O/c1-10(9-19)6-13-12-4-3-5-14-16(12)11(8-18-14)7-15(13)17-2/h3-6,8,13,15,17-19H,7,9H2,1-2H3/b10-6+/t13-,15-/m1/s1
InChI KeySAHHMCVYMGARBT-HEESEWQSSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Acremonium coenophialumFungi
Agropyrum spp.-
Argyreia nervosaPlant
Aspergillus fumigatusFungi
Aspergullus fumigatus-
Bakabsua obtecta B249-
Balansia clavicepsFungi
Balansia epichloeFungi
Balansia henningsianaFungi
Balansia strangulansFungi
Claviceps africanaFungi
Claviceps fusiformis PRL1980Fungi
Claviceps giganteaFungi
Claviceps paspaliFungi
Claviceps purpureaFungi
Elymus spp.Plant
Epichloe elymiFungi
Epichloe festucae Fl1Fungi
Epichloe inebrians e818Fungi
Epichloe typhinaLOTUS Database
Ipomoea argyrophyllaPlant
Ipomoea asarifoliaPlant
Ipomoea corymbosaPlant
Ipomoea nilLOTUS Database
Ipomoea tricolorPlant
Ipomoea violaceaPlant
Neosortorya fumigata Af293-
Neotyphodium gansuense-
Penicillium communeFungi
Pennisetum americanumPlant
Periglandula ipomoeae lasaF13-
Phalaris sp.Plant
Phragmites sp.Plant
Chemical Taxonomy
Description Belongs to the class of organic compounds known as clavines and derivatives. These are hydroxy and dehydro derivatives of 6,8-dimethylergolenes and the corresponding ergolines.
KingdomOrganic compounds
Super ClassAlkaloids and derivatives
ClassErgoline and derivatives
Sub ClassClavines and derivatives
Direct ParentClavines and derivatives
Alternative Parents
Substituents
  • Chanoclavine skeleton
  • 3-alkylindole
  • Indole
  • Indole or derivatives
  • Isoindole or derivatives
  • Aralkylamine
  • Benzenoid
  • Pyrrole
  • Heteroaromatic compound
  • Azacycle
  • Secondary aliphatic amine
  • Secondary amine
  • Organoheterocyclic compound
  • Organooxygen compound
  • Organonitrogen compound
  • Hydrocarbon derivative
  • Organopnictogen compound
  • Organic oxygen compound
  • Amine
  • Primary alcohol
  • Alcohol
  • Organic nitrogen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.91ALOGPS
logP1.87ChemAxon
logS-3.6ALOGPS
pKa (Strongest Acidic)15.16ChemAxon
pKa (Strongest Basic)10.34ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area48.05 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity78.97 m³·mol⁻¹ChemAxon
Polarizability28.82 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00001707
Chemspider ID4444739
KEGG Compound IDC09131
BioCyc IDCPD-12356
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5281381
PDB IDNot Available
ChEBI ID3576
Good Scents IDNot Available
References
General References
  1. Chaudhuri S, Bhunia S, Roy A, Das MK, Bisai A: Biomimetic Total Syntheses of Clavine Alkaloids. Org Lett. 2018 Jan 5;20(1):288-291. doi: 10.1021/acs.orglett.7b03683. Epub 2017 Dec 13. [PubMed:29235356 ]
  2. Liu M, Overy DP, Cayouette J, Shoukouhi P, Hicks C, Bisson K, Sproule A, Wyka SA, Broders K, Popovic Z, Menzies JG: Four phylogenetic species of ergot from Canada and their characteristics in morphology, alkaloid production, and pathogenicity. Mycologia. 2020 Sep-Oct;112(5):974-988. doi: 10.1080/00275514.2020.1797372. Epub 2020 Sep 16. [PubMed:32936061 ]
  3. Fabian SJ, Maust MD, Panaccione DG: Ergot Alkaloid Synthesis Capacity of Penicillium camemberti. Appl Environ Microbiol. 2018 Sep 17;84(19). pii: AEM.01583-18. doi: 10.1128/AEM.01583-18. Print 2018 Oct 1. [PubMed:30076193 ]
  4. Gerhards N, Li SM: A bifunctional old yellow enzyme from Penicillium roqueforti is involved in ergot alkaloid biosynthesis. Org Biomol Chem. 2017 Oct 4;15(38):8059-8071. doi: 10.1039/c7ob02095c. [PubMed:28902217 ]
  5. Lu JT, Shi ZF, Cao XP: Total Synthesis of (-)-Chanoclavine I and an Oxygen-Substituted Ergoline Derivative. J Org Chem. 2017 Aug 4;82(15):7774-7782. doi: 10.1021/acs.joc.7b00573. Epub 2017 Jul 17. [PubMed:28714687 ]