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Record Information
Version2.0
Created at2022-04-27 21:59:40 UTC
Updated at2022-04-27 21:59:40 UTC
NP-MRD IDNP0050631
Secondary Accession NumbersNone
Natural Product Identification
Common Name6-beta-D-glucopyranosyl-3',4',5-trihydroxy-7-methoxyflavone
DescriptionSwertiajaponin belongs to the class of organic compounds known as flavonoid c-glycosides. Flavonoid C-glycosides are compounds containing a carbohydrate moiety which is C-glycosidically linked to the 2-phenylchromen-4-one flavonoid backbone. Thus, swertiajaponin is considered to be a flavonoid. 6-beta-D-glucopyranosyl-3',4',5-trihydroxy-7-methoxyflavone is found in Arrhenatherum elatius, Achillea leptophylla, Achillea spp., Alliaria petiolata, Cephalaria leucantha, Cephalaria uralensis, Cymbopogon citratus , Carex fraseriana, Deschampsia antarctica, Echinodorus grandiflorus, Gentiana germanica, Gentiana ramosa, Gnetum gnemon , Iris germanica , Iris lactea, Iris nertshinskia, Iris ramosa, Iris sanguinea, Justicia pectoralis, Knautia montana, Leiothrix flavescens, Lophatherum gracile, Passiflora biflora, Passiflora sexflora, Phragmites australis, Pterocephalus plumosus, Saccharum officinarum, Swertia japonica , Swertia mileensis, Swertia pseudochinensis and Tragopogon spp.. 6-beta-D-glucopyranosyl-3',4',5-trihydroxy-7-methoxyflavone was first documented in 2018 (PMID: 29478533). Based on a literature review a small amount of articles have been published on Swertiajaponin (PMID: 33928007) (PMID: 32859126) (PMID: 31779076) (PMID: 30391397).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC22H22O11
Average Mass462.4070 Da
Monoisotopic Mass462.11621 Da
IUPAC Name2-(3,4-dihydroxyphenyl)-5-hydroxy-7-methoxy-6-[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]-4H-chromen-4-one
Traditional Nameswertiajaponin
CAS Registry NumberNot Available
SMILES
COC1=C([C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)C(O)=C2C(=O)C=C(OC2=C1)C1=CC=C(O)C(O)=C1
InChI Identifier
InChI=1S/C22H22O11/c1-31-13-6-14-16(11(26)5-12(32-14)8-2-3-9(24)10(25)4-8)19(28)17(13)22-21(30)20(29)18(27)15(7-23)33-22/h2-6,15,18,20-25,27-30H,7H2,1H3/t15-,18-,20+,21-,22+/m1/s1
InChI KeyDLVLXOYLQKCAME-DGHBBABESA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
A. elatiusa, A. lilacinumLOTUS Database
Achillea leptophyllaPlant
Achillea spp.Plant
Alliaria petiolataLOTUS Database
Cephalaria leucanthaPlant
Cephalaria uralensisPlant
Cymbopogon citratusPlant
Cymophyllus fraseriLOTUS Database
Deschampsia antarcticaPlant
Echinodorus grandiflorusLOTUS Database
Gentiana germanicaPlant
Gentiana ramosaPlant
Gnetum gnemonPlant
Iris germanicaPlant
Iris lacteaLOTUS Database
Iris nertshinskiaPlant
Iris ramosaPlant
Iris sanguineaPlant
Justicia pectoralisLOTUS Database
Knautia montanaPlant
Leiothrix flavescensLOTUS Database
Lophatherum gracileLOTUS Database
Passiflora bifloraLOTUS Database
Passiflora sexfloraLOTUS Database
Phragmites australisLOTUS Database
Pterocephalus plumosus-
Saccharum officinarumLOTUS Database
Swertia japonicaPlant
Swertia leduciiPlant
Swertia pseudochinensisLOTUS Database
Tragopogon spp.Plant
Chemical Taxonomy
Description Belongs to the class of organic compounds known as flavonoid c-glycosides. Flavonoid C-glycosides are compounds containing a carbohydrate moiety which is C-glycosidically linked to the 2-phenylchromen-4-one flavonoid backbone.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassFlavonoids
Sub ClassFlavonoid glycosides
Direct ParentFlavonoid C-glycosides
Alternative Parents
Substituents
  • Flavonoid c-glycoside
  • 7-methoxyflavonoid-skeleton
  • Hydroxyflavonoid
  • Flavone
  • 5-hydroxyflavonoid
  • 4'-hydroxyflavonoid
  • 3'-hydroxyflavonoid
  • Phenolic glycoside
  • Hexose monosaccharide
  • C-glycosyl compound
  • Chromone
  • Glycosyl compound
  • Benzopyran
  • 1-benzopyran
  • Anisole
  • Catechol
  • Alkyl aryl ether
  • Pyranone
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • 1-hydroxy-4-unsubstituted benzenoid
  • Monocyclic benzene moiety
  • Benzenoid
  • Pyran
  • Oxane
  • Monosaccharide
  • Vinylogous acid
  • Heteroaromatic compound
  • Secondary alcohol
  • Ether
  • Dialkyl ether
  • Organoheterocyclic compound
  • Oxacycle
  • Polyol
  • Hydrocarbon derivative
  • Organic oxide
  • Organic oxygen compound
  • Primary alcohol
  • Organooxygen compound
  • Alcohol
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.51ALOGPS
logP-0.21ChemAxon
logS-2.6ALOGPS
pKa (Strongest Acidic)6.93ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count11ChemAxon
Hydrogen Donor Count7ChemAxon
Polar Surface Area186.37 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity112.5 m³·mol⁻¹ChemAxon
Polarizability45.65 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00001102
Chemspider ID391020
KEGG Compound IDC10187
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound442659
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDrw1821101
References
General References
  1. Dwivedi PSR, Khanal P, Gaonkar VP, Rasal VP, Patil BM: Identification of PTP1B regulators from Cymbopogon citratus and its enrichment analysis for diabetes mellitus. In Silico Pharmacol. 2021 Apr 11;9(1):30. doi: 10.1007/s40203-021-00088-9. eCollection 2021. [PubMed:33928007 ]
  2. Chrzaszcz M, Miazga-Karska M, Klimek K, Granica S, Tchorzewska D, Ginalska G, Szewczyk K: Extracts from Cephalaria Uralensis (Murray) Roem. & Schult. and Cephalaria Gigantea (Ledeb.) Bobrov as Potential Agents for Treatment of Acne Vulgaris: Chemical Characterization and In Vitro Biological Evaluation. Antioxidants (Basel). 2020 Aug 26;9(9). pii: antiox9090796. doi: 10.3390/antiox9090796. [PubMed:32859126 ]
  3. Tchoumtchoua J, Mathiron D, Pontarin N, Gagneul D, van Bohemen AI, Otogo N'nang E, Mesnard F, Petit E, Fontaine JX, Molinie R, Quero A: Phenolic Profiling of Flax Highlights Contrasting Patterns in Winter and Spring Varieties. Molecules. 2019 Nov 26;24(23). pii: molecules24234303. doi: 10.3390/molecules24234303. [PubMed:31779076 ]
  4. Chen LF, Zhong YL, Luo D, Liu Z, Tang W, Cheng W, Xiong S, Li YL, Li MM: Antiviral activity of ethanol extract of Lophatherum gracile against respiratory syncytial virus infection. J Ethnopharmacol. 2019 Oct 5;242:111575. doi: 10.1016/j.jep.2018.10.036. Epub 2018 Nov 1. [PubMed:30391397 ]
  5. Moon KM, Lee B, Cho WK, Lee BS, Kim CY, Ma JY: Swertiajaponin as an anti-browning and antioxidant flavonoid. Food Chem. 2018 Jun 30;252:207-214. doi: 10.1016/j.foodchem.2018.01.053. Epub 2018 Jan 6. [PubMed:29478533 ]