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Record Information
Version1.0
Created at2022-04-27 21:58:51 UTC
Updated at2022-04-27 21:58:51 UTC
NP-MRD IDNP0050606
Secondary Accession NumbersNone
Natural Product Identification
Common NameAgathisflavone
DescriptionAgathisflavone, also known as 6,8''-biapigenin, belongs to the class of organic compounds known as biflavonoids and polyflavonoids. These are organic compounds containing at least two flavan/flavone units. These units are usually linked through CC or C-O-C bonds. Some examples include C2-O-C3, C2-O-C4, C3'-C3''', and C6-C8''. Thus, agathisflavone is considered to be a flavonoid lipid molecule. A biflavonoid that is obtained by oxidative coupling of two molecules of apigenin resulting in a bond between positions C-6 and C-8 of the two chromene rings. Agathisflavone is found in Agathis dammara, Agathis palmerstoni, Araucaria bidwillii , Bauhinia vahlii , Campylospermum flavum, Campylospermum sulcatum, Canarium manii, Garcinia xanthochymus , Juniperus virginiana, Orthopterygium huaucui, Ouratea sulcata, Picea smithiana, Rhus coriaria, Rhus punjabensis, Rhus succedanea , Schinus terebinthifolia and Toxicodendron succedaneum. It was first documented in 1992 (PMID: 1484886). Agathisflavone is a very hydrophobic molecule, practically insoluble (in water), and relatively neutral (PMID: 21106357) (PMID: 21281018) (PMID: 21594945).
Structure
Thumb
Synonyms
ValueSource
5,5',7,7'-Tetrahydroxy-2,2'-bis(4-hydroxyphenyl)-(6,8'-bi-4H-1-benzopyran)-4,4'-dioneChEBI
6,8''-BiapigeninChEBI
7''-Methyl-agathisflavoneMeSH
Chemical FormulaC30H18O10
Average Mass538.4640 Da
Monoisotopic Mass538.09000 Da
IUPAC Name6-[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxo-4H-chromen-8-yl]-5,7-dihydroxy-2-(4-hydroxyphenyl)-4H-chromen-4-one
Traditional Nameagathisflavone
CAS Registry NumberNot Available
SMILES
OC1=CC=C(C=C1)C1=CC(=O)C2=C(O)C(=C(O)C=C2O1)C1=C(O)C=C(O)C2=C1OC(=CC2=O)C1=CC=C(O)C=C1
InChI Identifier
InChI=1S/C30H18O10/c31-15-5-1-13(2-6-15)22-11-20(36)26-24(39-22)12-21(37)27(29(26)38)28-18(34)9-17(33)25-19(35)10-23(40-30(25)28)14-3-7-16(32)8-4-14/h1-12,31-34,37-38H
InChI KeyBACLASYRJRZXMY-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Agathis dammaraPlant
Agathis palmerstoniPlant
Araucaria bidwilliiPlant
Bauhinia vahliiPlant
Campylospermum flavumLOTUS Database
Campylospermum sulcatumLOTUS Database
Canarium maniiPlant
Garcinia xanthochymusPlant
Juniperus virginianaLOTUS Database
Orthopterygium huaucuiLOTUS Database
Ouratea sulcataPlant
Picea smithianaLOTUS Database
Rhus coriariaLOTUS Database
Rhus punjabensisLOTUS Database
Rhus succedaneaPlant
Schinus terebinthifoliaLOTUS Database
Toxicodendron succedaneumLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as biflavonoids and polyflavonoids. These are organic compounds containing at least two flavan/flavone units. These units are usually linked through CC or C-O-C bonds. Some examples include C2-O-C3, C2-O-C4, C3'-C3''', and C6-C8''.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassFlavonoids
Sub ClassBiflavonoids and polyflavonoids
Direct ParentBiflavonoids and polyflavonoids
Alternative Parents
Substituents
  • Bi- and polyflavonoid skeleton
  • 4'-hydroxyflavonoid
  • 5-hydroxyflavonoid
  • 7-hydroxyflavonoid
  • Flavone
  • Hydroxyflavonoid
  • Chromone
  • Benzopyran
  • 1-benzopyran
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Pyranone
  • Monocyclic benzene moiety
  • Pyran
  • Benzenoid
  • Heteroaromatic compound
  • Vinylogous acid
  • Organoheterocyclic compound
  • Oxacycle
  • Organic oxygen compound
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.44ALOGPS
logP5.09ChemAxon
logS-4.6ALOGPS
pKa (Strongest Acidic)5.8ChemAxon
pKa (Strongest Basic)-6.4ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count10ChemAxon
Hydrogen Donor Count6ChemAxon
Polar Surface Area173.98 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity144.91 m³·mol⁻¹ChemAxon
Polarizability53.59 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00001014
Chemspider IDNot Available
KEGG Compound IDC10017
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5281599
PDB IDNot Available
ChEBI ID2512
Good Scents IDNot Available
References
General References
  1. Anand KK, Gupta VN, Rangari V, Singh B, Chandan BK: Structure and hepatoprotective activity of a biflavonoid from Canarium manii. Planta Med. 1992 Dec;58(6):493-5. doi: 10.1055/s-2006-961533. [PubMed:1484886 ]
  2. Konan NA, Lincopan N, Diaz IE, de Fatima Jacysyn J, Tiba MM, Amarante Mendes JG, Bacchi EM, Spira B: Cytotoxicity of cashew flavonoids towards malignant cell lines. Exp Toxicol Pathol. 2012 Jul;64(5):435-40. doi: 10.1016/j.etp.2010.10.010. Epub 2010 Nov 23. [PubMed:21106357 ]
  3. Paulsen BS, Souza CS, Chicaybam L, Bonamino MH, Bahia M, Costa SL, Borges HL, Rehen SK: Agathisflavone enhances retinoic acid-induced neurogenesis and its receptors alpha and beta in pluripotent stem cells. Stem Cells Dev. 2011 Oct;20(10):1711-21. doi: 10.1089/scd.2010.0446. Epub 2011 Mar 18. [PubMed:21281018 ]
  4. Njock GB, Bartholomeusz TA, Foroozandeh M, Pegnyemb DE, Christen P, Jeannerat D: NASCA-HMBC, a new NMR methodology for the resolution of severely overlapping signals: application to the study of agathisflavone. Phytochem Anal. 2012 Mar-Apr;23(2):126-30. doi: 10.1002/pca.1333. Epub 2011 May 19. [PubMed:21594945 ]