Np mrd loader

Record Information
Version2.0
Created at2022-03-17 20:58:26 UTC
Updated at2022-03-17 20:58:26 UTC
NP-MRD IDNP0048563
Secondary Accession NumbersNone
Natural Product Identification
Common NameEuscaphic acid
DescriptionEuscaphic acid, also known as jacarandic acid or tormentic acid, belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. Euscaphic acid is an extremely weak basic (essentially neutral) compound (based on its pKa). Outside of the human body, Euscaphic acid has been detected, but not quantified in, herbs and spices and loquats. This could make euscaphic acid a potential biomarker for the consumption of these foods. Euscaphic acid is found in Acaena pinnatifida, Acanthochlamys bracteata, Agrimonia pilosa, Alchemilla alpina, Alchemilla vulgaris, Anchusa strigosa, Arnebia euchroma, Callicarpa americana, Campsis grandiflora, Cecropia pachystachya, Centella asiatica, Chaenomeles sinensis, Chaenomeles speciosa, Cornus kousa, Cotoneaster symondsii, Drymonia macrophylla, Dysoxylum densiflorum, Elsholtzia bodinieri, Elsholtzia ciliata, Euscaphis japonica, Fragaria ananassa, Geum japonicum, Hedyotis lawsoniae, Hoslundia opposita, Hyptis capitata, Incarvillea arguta, Isodon effusus, Isodon loxothyrsus, Isodon sculponeatus, Laggera pterodonta, Lecanthus peduncularis, Lepechinia caulescens, Leucosceptrum stellipilum, Licania pyrifolia, Margyricarpus setosus, Markhamia tomentosa, Marsypianthes chamaedrys, Licania tomentosa, Mosla scabra, Musanga cecropioides, Myrianthus arboreus, Myrianthus libericus, Myrianthus serratus, Ocimum basilicum, Olea europaea, Paliurus hemsleyanus, Perilla frutescens, Photinia serratifolia, Pimpinella saxifraga, Polylepis incana, Dasiphora fruticosa, Prunus zippeliana, Pygeum topengii, Pyracantha coccinea, Eriobotrya deflexa, Rosa bella, Rosa davidii, Rosa davurica, Rosa laevigata, Rosa multiflora, Rosa roxburghii, Rosa rugosa, Rosa sericea, Rosa sterilis, Rosa taiwanensis, Rosa transmorrisonensis, Rosa woodsii, Rubus allegheniensis, Rubus cochinchinensis, Rubus ellipticus, Rubus irenaeus, Rubus parkeri, Rubus pungens, Rubus ulmifolius, Rubus xanthocarpus, Rumex japonicus, Sanguisorba ancistroides, Sanguisorba officinalis, Sarcopoterium spinosum, Tecoma stans, Ternstroemia gymnanthera, Tiarella polyphylla, Triumfetta cordifolia, Trogopterus xanthipes, Turpinia arguta, Vismia guianensis, Vitex altissima and Vitex negundo. It was first documented in 2000 (PMID: 11413487). A pentacyclic triterpenoid that is urs-12-en-28-oic acid substituted by hydroxy groups at positions 2, 3 and 19 respectively (the 2alpha,3alpha-stereoisomer) (PMID: 16902246) (PMID: 17374880) (PMID: 20044567) (PMID: 21384845).
Structure
Thumb
Synonyms
ValueSource
Jacarandic acidChEBI
Tormentic acidChEBI
JacarandateGenerator
TormentateGenerator
EuscaphateGenerator
Acuminatic acidHMDB
2alpha-Acetyl tormentic acidHMDB
(2alpha,3beta)-Isomer OF euscaphic acidHMDB
Chemical FormulaC30H48O5
Average Mass488.6991 Da
Monoisotopic Mass488.35017 Da
IUPAC Name(1R,2R,4aS,6aS,6bR,8aR,10S,11R,12aR,12bR,14bS)-1,10,11-trihydroxy-1,2,6a,6b,9,9,12a-heptamethyl-1,2,3,4,4a,5,6,6a,6b,7,8,8a,9,10,11,12,12a,12b,13,14b-icosahydropicene-4a-carboxylic acid
Traditional Name(1R,2R,4aS,6aS,6bR,8aR,10S,11R,12aR,12bR,14bS)-1,10,11-trihydroxy-1,2,6a,6b,9,9,12a-heptamethyl-2,3,4,5,6,7,8,8a,10,11,12,12b,13,14b-tetradecahydropicene-4a-carboxylic acid
CAS Registry Number53155-25-2
SMILES
[H][C@@]12CC[C@]3(C)[C@]([H])(CC=C4[C@]5([H])[C@](C)(O)[C@H](C)CC[C@@]5(CC[C@@]34C)C(O)=O)[C@@]1(C)C[C@@H](O)[C@@H](O)C2(C)C
InChI Identifier
InChI=1S/C30H48O5/c1-17-10-13-30(24(33)34)15-14-27(5)18(22(30)29(17,7)35)8-9-21-26(4)16-19(31)23(32)25(2,3)20(26)11-12-28(21,27)6/h8,17,19-23,31-32,35H,9-16H2,1-7H3,(H,33,34)/t17-,19-,20+,21-,22-,23-,26+,27-,28-,29-,30+/m1/s1
InChI KeyOXVUXGFZHDKYLS-QUFHAEKXSA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Acaena pinnatifidaLOTUS Database
Acanthochlamys bracteataLOTUS Database
Agrimonia pilosaLOTUS Database
Alchemilla alpinaLOTUS Database
Alchemilla vulgarisLOTUS Database
Anchusa strigosaLOTUS Database
Arnebia euchromaLOTUS Database
Callicarpa americanaLOTUS Database
Campsis grandifloraLOTUS Database
Cecropia pachystachyaLOTUS Database
Centella asiaticaLOTUS Database
Chaenomeles sinensisLOTUS Database
Chaenomeles speciosaLOTUS Database
Cornus kousaLOTUS Database
Cotoneaster symondsiiLOTUS Database
Drymonia macrophyllaLOTUS Database
Dysoxylum densiflorumLOTUS Database
Elsholtzia bodinieriLOTUS Database
Elsholtzia ciliataLOTUS Database
Eriobotrya japonicaFooDB
Euscaphis japonicaLOTUS Database
Fragaria x ananassaLOTUS Database
Geum japonicumLOTUS Database
Hedyotis lawsoniaeLOTUS Database
Hoslundia oppositaLOTUS Database
Hyptis capitataLOTUS Database
Incarvillea argutaLOTUS Database
Isodon effususLOTUS Database
Isodon loxothyrsusLOTUS Database
Isodon sculponeatusLOTUS Database
Laggera pterodontaLOTUS Database
Lecanthus peduncularisLOTUS Database
Lepechinia caulescensLOTUS Database
Leucosceptrum stellipilumLOTUS Database
Licania pyrifoliaLOTUS Database
Margyricarpus setosusLOTUS Database
Markhamia tomentosaLOTUS Database
Marsypianthes chamaedrysLOTUS Database
Moquilea tomentosaLOTUS Database
Mosla scabraLOTUS Database
Musanga cecropioidesLOTUS Database
Myrianthus arboreusLOTUS Database
Myrianthus libericusLOTUS Database
Myrianthus serratusLOTUS Database
Ocimum basilicumLOTUS Database
Olea europaeaLOTUS Database
Paliurus hemsleyanusLOTUS Database
Perilla frutescensLOTUS Database
Photinia serratifoliaLOTUS Database
Pimpinella saxifragaLOTUS Database
Polylepis incanaLOTUS Database
Potentilla fruticosaLOTUS Database
Prunus zippelianaLOTUS Database
Pygeum topengiiLOTUS Database
Pyracantha coccineaLOTUS Database
Rhaphiolepis deflexaLOTUS Database
Rosa bellaLOTUS Database
Rosa davidiiLOTUS Database
Rosa davuricaLOTUS Database
Rosa laevigataLOTUS Database
Rosa multifloraLOTUS Database
Rosa roxburghiiLOTUS Database
Rosa rugosaLOTUS Database
Rosa sericeaLOTUS Database
Rosa sterilis (nom. nud.)LOTUS Database
Rosa taiwanensisLOTUS Database
Rosa transmorrisonensisLOTUS Database
Rosa woodsiiLOTUS Database
Rubus allegheniensisLOTUS Database
Rubus cochinchinensisLOTUS Database
Rubus ellipticusLOTUS Database
Rubus irenaeusLOTUS Database
Rubus parkeriLOTUS Database
Rubus pungensLOTUS Database
Rubus ulmifoliusLOTUS Database
Rubus xanthocarpusLOTUS Database
Rumex japonicusLOTUS Database
Sanguisorba ancistroidesLOTUS Database
Sanguisorba officinalisLOTUS Database
Sarcopoterium spinosumLOTUS Database
Tecoma stansLOTUS Database
Ternstroemia gymnantheraLOTUS Database
Tiarella polyphyllaLOTUS Database
Triumfetta cordifoliaLOTUS Database
Trogopterus xanthipesLOTUS Database
Turpinia argutaLOTUS Database
Vismia guianensisLOTUS Database
Vitex altissimaLOTUS Database
Vitex negundoLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTriterpenoids
Direct ParentTriterpenoids
Alternative Parents
Substituents
  • Triterpenoid
  • Tertiary alcohol
  • Cyclic alcohol
  • Secondary alcohol
  • Polyol
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Alcohol
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.87ALOGPS
logP4.27ChemAxon
logS-4.8ALOGPS
pKa (Strongest Acidic)4.64ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area97.99 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity136.66 m³·mol⁻¹ChemAxon
Polarizability56.47 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDHMDB0036651
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDFDB015576
KNApSAcK IDC00019491
Chemspider ID16161183
KEGG Compound IDC17890
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound13653335
PDB IDNot Available
ChEBI ID67914
Good Scents IDNot Available
References
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. Zeng N, Shen Y, Li LZ, Jiao WH, Gao PY, Song SJ, Chen WS, Lin HW: Anti-inflammatory triterpenes from the leaves of Rosa laevigata. J Nat Prod. 2011 Apr 25;74(4):732-8. doi: 10.1021/np1007922. Epub 2011 Mar 8. [PubMed:21384845 ]