Np mrd loader

Showing NP-Card for trans-(-)-p-Menth-1-en-3-ol (NP0048360)

Jump To Section:
IdentificationSpectraBioTaxonomyChemoTaxonomyPhysical propertiesLinksReferencesXML
Record Information
Version2.0
Created at2022-03-17 20:55:15 UTC
Updated at2022-03-17 20:55:15 UTC
NP-MRD IDNP0048360
Secondary Accession NumbersNone
Natural Product Identification
Common Nametrans-(-)-p-Menth-1-en-3-ol
DescriptionTrans-(-)-p-Menth-1-en-3-ol belongs to the class of organic compounds known as menthane monoterpenoids. These are monoterpenoids with a structure based on the o-, m-, or p-menthane backbone. P-menthane consists of the cyclohexane ring with a methyl group and a (2-methyl)-propyl group at the 1 and 4 ring position, respectively. The o- and m- menthanes are much rarer, and presumably arise by alkyl migration of p-menthanes. Trans-(-)-p-Menth-1-en-3-ol is an extremely weak basic (essentially neutral) compound (based on its pKa). Outside of the human body, trans-(-)-p-Menth-1-en-3-ol has been detected, but not quantified in, herbs and spices and mentha (mint). trans-(-)-p-Menth-1-en-3-ol is found in Ligusticum chuanxiong and Zanthoxylum schinifolium. This could make trans-(-)-p-menth-1-en-3-ol a potential biomarker for the consumption of these foods.
Structure
Thumb
MOLSDFPDBSMILESInChI

MOL for NP0048360 (trans-(-)-p-Menth-1-en-3-ol)


  Mrv0541 02241209142D          

 11 11  0  0  0  0            999 V2000
   -0.1882    1.0429    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9026    0.6304    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9026   -0.1946    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1882   -0.6071    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.5263   -0.1946    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5263    0.6304    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1882    1.8679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6171   -0.6071    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1882   -1.4321    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5263   -1.8446    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9026   -1.8446    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  1  6  1  0  0  0  0
  1  7  1  0  0  0  0
  3  8  1  6  0  0  0
  4  9  1  1  0  0  0
  9 10  1  0  0  0  0
  9 11  1  0  0  0  0
M  END
Download

3D MOL for NP0048360 (trans-(-)-p-Menth-1-en-3-ol)

Download
3D SDF for NP0048360 (trans-(-)-p-Menth-1-en-3-ol)

  Mrv0541 02241209142D          

 11 11  0  0  0  0            999 V2000
   -0.1882    1.0429    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9026    0.6304    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9026   -0.1946    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1882   -0.6071    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.5263   -0.1946    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5263    0.6304    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1882    1.8679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6171   -0.6071    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1882   -1.4321    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5263   -1.8446    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9026   -1.8446    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  1  6  1  0  0  0  0
  1  7  1  0  0  0  0
  3  8  1  6  0  0  0
  4  9  1  1  0  0  0
  9 10  1  0  0  0  0
  9 11  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0048360

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(C)[C@@H]1CCC(C)=C[C@H]1O

> <INCHI_IDENTIFIER>
InChI=1S/C10H18O/c1-7(2)9-5-4-8(3)6-10(9)11/h6-7,9-11H,4-5H2,1-3H3/t9-,10+/m0/s1

> <INCHI_KEY>
HPOHAUWWDDPHRS-VHSXEESVSA-N

> <FORMULA>
C10H18O

> <MOLECULAR_WEIGHT>
154.2493

> <EXACT_MASS>
154.135765198

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_AVERAGE_POLARIZABILITY>
19.022420345818382

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1S,6S)-3-methyl-6-(propan-2-yl)cyclohex-2-en-1-ol

> <ALOGPS_LOGP>
2.64

> <JCHEM_LOGP>
2.4146011256666675

> <ALOGPS_LOGS>
-1.90

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
18.763486870542224

> <JCHEM_PKA_STRONGEST_BASIC>
-1.1526508428248317

> <JCHEM_POLAR_SURFACE_AREA>
20.23

> <JCHEM_REFRACTIVITY>
48.141299999999994

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.95e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,6S)-6-isopropyl-3-methylcyclohex-2-en-1-ol

> <JCHEM_VEBER_RULE>
1

$$$$

Download
3D-SDF for NP0048360 (trans-(-)-p-Menth-1-en-3-ol)
Download
PDB for NP0048360 (trans-(-)-p-Menth-1-en-3-ol)
HEADER    PROTEIN                                 24-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-FEB-12         0                                  
HETATM    1  C   UNK     0      -0.351   1.947   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -1.685   1.177   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -1.685  -0.363   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -0.351  -1.133   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.982  -0.363   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       0.982   1.177   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.351   3.487   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0      -3.019  -1.133   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0      -0.351  -2.673   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.982  -3.443   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -1.685  -3.443   0.000  0.00  0.00           C+0
CONECT    1    2    6    7                                                  
CONECT    2    1    3                                                       
CONECT    3    2    4    8                                                  
CONECT    4    3    5    9                                                  
CONECT    5    4    6                                                       
CONECT    6    5    1                                                       
CONECT    7    1                                                            
CONECT    8    3                                                            
CONECT    9    4   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9                                                            
MASTER        0    0    0    0    0    0    0    0   11    0   22    0
END

Download
3D PDB for NP0048360 (trans-(-)-p-Menth-1-en-3-ol)
Download
SMILES for NP0048360 (trans-(-)-p-Menth-1-en-3-ol)
CC(C)[C@@H]1CCC(C)=C[C@H]1O
Download
INCHI for NP0048360 (trans-(-)-p-Menth-1-en-3-ol)
InChI=1S/C10H18O/c1-7(2)9-5-4-8(3)6-10(9)11/h6-7,9-11H,4-5H2,1-3H3/t9-,10+/m0/s1
Download
View in JSmol
Synonyms
ValueSource
(-)-trans-p-Menth-1-en-3-olHMDB
(3S,4S)-(-)-p-Menth-1-en-3-olHMDB
trans-(-)-PiperitolHMDB
Chemical FormulaC10H18O
Average Mass154.2493 Da
Monoisotopic Mass154.13577 Da
IUPAC Name(1S,6S)-3-methyl-6-(propan-2-yl)cyclohex-2-en-1-ol
Traditional Name(1S,6S)-6-isopropyl-3-methylcyclohex-2-en-1-ol
CAS Registry Number25437-28-9
SMILES
CC(C)[C@@H]1CCC(C)=C[C@H]1O
InChI Identifier
InChI=1S/C10H18O/c1-7(2)9-5-4-8(3)6-10(9)11/h6-7,9-11H,4-5H2,1-3H3/t9-,10+/m0/s1
InChI KeyHPOHAUWWDDPHRS-VHSXEESVSA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Ligusticum chuanxiongLOTUS Database
MenthaFooDB
Zanthoxylum schinifoliumLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as menthane monoterpenoids. These are monoterpenoids with a structure based on the o-, m-, or p-menthane backbone. P-menthane consists of the cyclohexane ring with a methyl group and a (2-methyl)-propyl group at the 1 and 4 ring position, respectively. The o- and m- menthanes are much rarer, and presumably arise by alkyl migration of p-menthanes.
KingdomOrganic compounds  
Super ClassLipids and lipid-like molecules  
ClassPrenol lipids  
Sub ClassMonoterpenoids  
Direct ParentMenthane monoterpenoids  
Alternative Parents
Substituents
  • P-menthane monoterpenoid
    • 

  • Monocyclic monoterpenoid
    • 

  • Secondary alcohol
    • 

  • Organic oxygen compound
    • 

  • Hydrocarbon derivative
    • 

  • Organooxygen compound
    • 

  • Alcohol
    • 

  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP2.64ALOGPS
logP2.41ChemAxon
logS-1.9ALOGPS
pKa (Strongest Acidic)18.76ChemAxon
pKa (Strongest Basic)-1.2ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area20.23 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity48.14 m³·mol⁻¹ChemAxon
Polarizability19.02 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDHMDB0035861  
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDFDB014641  
KNApSAcK IDC00010925  
Chemspider ID19953353  
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound12314336  
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References