Np mrd loader

Record Information
Version2.0
Created at2022-03-17 20:52:07 UTC
Updated at2022-03-17 20:52:07 UTC
NP-MRD IDNP0048163
Secondary Accession NumbersNone
Natural Product Identification
Common Name5,6-Epoxy-5,6-dihydrolycopene
Description5,6-Epoxy-5,6-dihydrolycopene belongs to the class of organic compounds known as sesquaterpenoids. These are terpenoids with at least 7 consecutive isoprene units. 5,6-Epoxy-5,6-dihydrolycopene is an extremely weak basic (essentially neutral) compound (based on its pKa). Outside of the human body, 5,6-Epoxy-5,6-dihydrolycopene has been detected, but not quantified in, garden tomato. This could make 5,6-epoxy-5,6-dihydrolycopene a potential biomarker for the consumption of these foods.
Structure
Thumb
Synonyms
ValueSource
5,6-Epoxy-5,6-dihydro-y,y-caroteneHMDB
Chemical FormulaC40H56O
Average Mass552.8720 Da
Monoisotopic Mass552.43312 Da
IUPAC Name3-[(1E,3Z,5E,7E,9E,11E,13Z,15E,17E,19Z)-3,7,12,16,20,24-hexamethylpentacosa-1,3,5,7,9,11,13,15,17,19,23-undecaen-1-yl]-2-methyl-2-(4-methylpent-3-en-1-yl)oxirane
Traditional Name3-[(1E,3Z,5E,7E,9E,11E,13Z,15E,17E,19Z)-3,7,12,16,20,24-hexamethylpentacosa-1,3,5,7,9,11,13,15,17,19,23-undecaen-1-yl]-2-methyl-2-(4-methylpent-3-en-1-yl)oxirane
CAS Registry Number51599-10-1
SMILES
CC(C)=CCC\C(C)=C/C=C/C(/C)=C/C=C\C(\C)=C\C=C\C=C(/C)\C=C\C=C(\C)/C=C/C1OC1(C)CCC=C(C)C
InChI Identifier
InChI=1S/C40H56O/c1-32(2)18-13-22-36(7)25-15-27-37(8)26-14-23-34(5)20-11-12-21-35(6)24-16-28-38(9)29-30-39-40(10,41-39)31-17-19-33(3)4/h11-12,14-16,18-21,23-30,39H,13,17,22,31H2,1-10H3/b12-11+,23-14-,24-16+,27-15+,30-29+,34-20+,35-21+,36-25-,37-26+,38-28-
InChI KeyKAOPTJGOSUTKJR-CUEHAKLQSA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Solanum lycopersicumFooDB
    • Shmuel Yannai Dictionary of Food Compounds with CD-ROM: Additives, Flavors, and Ingredients. Chap...
Chemical Taxonomy
Description Belongs to the class of organic compounds known as sesquaterpenoids. These are terpenoids with at least 7 consecutive isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassSesquaterpenoids
Direct ParentSesquaterpenoids
Alternative Parents
Substituents
  • Sesquaterpenoid
  • Oxacycle
  • Organoheterocyclic compound
  • Ether
  • Oxirane
  • Dialkyl ether
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP9.1ALOGPS
logP11.19ChemAxon
logS-6.2ALOGPS
pKa (Strongest Basic)-4.3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area12.53 ŲChemAxon
Rotatable Bond Count16ChemAxon
Refractivity196.41 m³·mol⁻¹ChemAxon
Polarizability72.46 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDHMDB0035139
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDFDB013775
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound131751673
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References