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Record Information
Version2.0
Created at2022-03-17 20:50:00 UTC
Updated at2022-03-17 20:50:00 UTC
NP-MRD IDNP0048033
Secondary Accession NumbersNone
Natural Product Identification
Common NameSoyasaponin I
DescriptionSoyasaponin I, also known as SCM 3B, belongs to the class of organic compounds known as triterpene saponins. These are glycosylated derivatives of triterpene sapogenins. The sapogenin moiety backbone is usually based on the oleanane, ursane, taraxastane, bauerane, lanostane, lupeol, lupane, dammarane, cycloartane, friedelane, hopane, 9b,19-cyclo-lanostane, cycloartane, or cycloartanol skeleton. Soyasaponin I is an extremely weak basic (essentially neutral) compound (based on its pKa). Outside of the human body, Soyasaponin I is found, on average, in the highest concentration within soy beans. Soyasaponin I has also been detected, but not quantified in, several different foods, such as chickpea, common pea, lentils, and pulses. Soyasaponin I is found in Abrus fruticulosus, Abrus pulchellus, Arachis hypogaea, Astragalus icmadophilus, Astragalus membranaceus, Astragalus shikokianus, Astragalus sikokianus, Crotalaria albida, Sophora koreensis, Glycyrrhiza glabra, Gueldenstaedtia multiflora , Gueldenstaedtia verna, Hedysarum polybotrys, Impatiens siculifer, Lupinus angustifolius, Lupinus oreophilus, Lupinus polyphyllus, Medicago arabica, Medicago arborea, Medicago citrina, Medicago polymorpha, Medicago sativa , Medicago truncatula, Melilotus messanensis, Melilotus officinalis, Phaseolus spp., Pueraria montana, Rothia indica, Sophora flavescens , Sophora tonkinensis, Sorbus cuspidata, Styphnolobium japonicum, Trifolium alexandrinum, Trifolium argutum, Trifolium pratense, Trifolium repens , Trifolium resupinatum, Vigna angularis , Vigna mungo and Wisteria brachybotrys. This could make soyasaponin I a potential biomarker for the consumption of these foods.
Structure
Thumb
Synonyms
ValueSource
Oleanane, b-D-glucopyranosiduronic acid deriv.HMDB
SCM 3bHMDB
Soyasaponin BBHMDB
Soybean saponin fraction b1HMDB
5-{[4,5-dihydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-2-yl]oxy}-3,4-dihydroxy-6-{[9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4,4a,5,6,6a,6b,7,8,8a,9,10,11,12,12a,14,14a,14b-icosahydropicen-3-yl]oxy}oxane-2-carboxylateGenerator
Chemical FormulaC48H78O18
Average Mass943.1221 Da
Monoisotopic Mass942.51882 Da
IUPAC Name5-{[4,5-dihydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-2-yl]oxy}-3,4-dihydroxy-6-{[9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4,4a,5,6,6a,6b,7,8,8a,9,10,11,12,12a,14,14a,14b-icosahydropicen-3-yl]oxy}oxane-2-carboxylic acid
Traditional Name5-{[4,5-dihydroxy-6-(hydroxymethyl)-3-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-2-yl]oxy}-3,4-dihydroxy-6-{[9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy}oxane-2-carboxylic acid
CAS Registry Number51330-27-9
SMILES
CC1OC(OC2C(O)C(O)C(CO)OC2OC2C(O)C(O)C(OC2OC2CCC3(C)C(CCC4(C)C3CC=C3C5CC(C)(C)CC(O)C5(C)CCC43C)C2(C)CO)C(O)=O)C(O)C(O)C1O
InChI Identifier
InChI=1S/C48H78O18/c1-21-29(52)31(54)35(58)40(61-21)65-37-32(55)30(53)24(19-49)62-41(37)66-38-34(57)33(56)36(39(59)60)64-42(38)63-28-12-13-45(5)25(46(28,6)20-50)11-14-48(8)26(45)10-9-22-23-17-43(2,3)18-27(51)44(23,4)15-16-47(22,48)7/h9,21,23-38,40-42,49-58H,10-20H2,1-8H3,(H,59,60)
InChI KeyPTDAHAWQAGSZDD-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Abrus fruticulosusPlant
Abrus pulchellusLOTUS Database
Arachis hypogaeaLOTUS Database
Astragalus icmadophilusLOTUS Database
Astragalus membranaceusLOTUS Database
Astragalus shikokianusPlant
Astragalus sikokianusLOTUS Database
Cicer arietinumFooDB
Crotalaria albidaLOTUS Database
Echinosophora koreensisPlant
Glycine maxFooDB
Glycyrrhiza glabraLOTUS Database
Gueldenstaedtia multifloraPlant
Gueldenstaedtia vernaLOTUS Database
Hedysarum polybotrysLOTUS Database
Impatiens siculiferPlant
Lens culinarisFooDB
Lupinus angustifoliusLOTUS Database
Lupinus oreophilusLOTUS Database
Lupinus polyphyllusLOTUS Database
Medicago arabicaLOTUS Database
Medicago arboreaLOTUS Database
Medicago citrinaLOTUS Database
Medicago polymorphaLOTUS Database
Medicago sativaPlant
Medicago truncatulaLOTUS Database
Melilotus messanensisPlant
Melilotus officinalisLOTUS Database
Phaseolus spp.Plant
Phaseolus vulgarisFooDB
Pisum sativumFooDB
Pueraria montanaLOTUS Database
Rothia indicaLOTUS Database
Sophora flavescensPlant
Sophora tonkinensisLOTUS Database
Sorbus cuspidataLOTUS Database
Styphnolobium japonicumLOTUS Database
Trifolium alexandrinumLOTUS Database
Trifolium argutumPlant
Trifolium pratenseLOTUS Database
Trifolium repensPlant
Trifolium resupinatumPlant
Vigna angularisPlant
Vigna mungoLOTUS Database
Wisteria brachybotrysLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triterpene saponins. These are glycosylated derivatives of triterpene sapogenins. The sapogenin moiety backbone is usually based on the oleanane, ursane, taraxastane, bauerane, lanostane, lupeol, lupane, dammarane, cycloartane, friedelane, hopane, 9b,19-cyclo-lanostane, cycloartane, or cycloartanol skeleton.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTerpene glycosides
Direct ParentTriterpene saponins
Alternative Parents
Substituents
  • Triterpene saponin
  • Triterpenoid
  • Oligosaccharide
  • Steroid
  • Fatty acyl glycoside
  • 1-o-glucuronide
  • O-glucuronide
  • Glucuronic acid or derivatives
  • Glycosyl compound
  • O-glycosyl compound
  • Beta-hydroxy acid
  • Fatty acyl
  • Hydroxy acid
  • Pyran
  • Oxane
  • Cyclic alcohol
  • Secondary alcohol
  • Acetal
  • Polyol
  • Oxacycle
  • Monocarboxylic acid or derivatives
  • Carboxylic acid derivative
  • Carboxylic acid
  • Organoheterocyclic compound
  • Primary alcohol
  • Hydrocarbon derivative
  • Organic oxide
  • Alcohol
  • Carbonyl group
  • Organooxygen compound
  • Organic oxygen compound
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP2.17ALOGPS
logP0.95ChemAxon
logS-3.6ALOGPS
pKa (Strongest Acidic)3.32ChemAxon
pKa (Strongest Basic)-3.6ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count18ChemAxon
Hydrogen Donor Count11ChemAxon
Polar Surface Area294.98 ŲChemAxon
Rotatable Bond Count9ChemAxon
Refractivity230.76 m³·mol⁻¹ChemAxon
Polarizability102.4 ųChemAxon
Number of Rings8ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDHMDB0034649
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDFDB013173
KNApSAcK IDC00019147
Chemspider ID4263772
KEGG Compound IDC08983
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5087640
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References