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Record Information
Version2.0
Created at2022-03-17 20:48:20 UTC
Updated at2022-03-17 20:48:20 UTC
NP-MRD IDNP0047934
Secondary Accession NumbersNone
Natural Product Identification
Common NameIsopimpinellin
DescriptionIsopimpinellin, also known as dimethylpsoralen, belongs to the class of organic compounds known as 8-methoxypsoralens. These are psoralens containing a methoxy group attached at the C8 position of the psoralen group. Furocoumarin photochemotherapy is known to induce a number of side-effects including erythema, edema, hyperpigmentation, and premature aging of skin. The furocoumarin 8-methoxypsoralen is carcinogenic to humans, and possibly 5-methoxypsoralen as well (L135). The mechanism of action many furocoumarins is based on their ability to form photoadducts with DNA and other cellular components such as RNA, proteins, and several proteins found in the membrane such as phospholipases A2 and C, Ca-dependent and cAMPdependent protein-kinase and epidermal growth factor. Isopimpinellin is an extremely weak basic (essentially neutral) compound (based on its pKa). Outside of the human body, Isopimpinellin is found, on average, in the highest concentration within a few different foods, such as parsley, celery stalks, and fennels. Isopimpinellin has also been detected, but not quantified in, several different foods, such as carrots, parsnips, anises, limes, and wild celeries. This could make isopimpinellin a potential biomarker for the consumption of these foods. IARC has assessed other furocoumarins, classifying 8-methoxypsoralen as carcinogenic to humans (Group 1), 5-methoxypsoralen as possibly carcinogenic to humans (Group 2A), and certain other furocoumarins as not being classifiable as to their carcinogenicity to humans (Group 3). Isopimpinellin is a potentially toxic compound. Isopimpinelin strongly inhibits insulin-stimulated lipogenesis. All photobiological effects of furocoumarins result from their photochemical reactions. There is some evidence from mouse studies that other furocoumarins are carcinogenic when combined with exposure to UVA radiation (A15105). Isopimpinellin is found in Aeglopsis chevalieri, Alocasia macrorrhizos, Ammi majus, Angelica acutiloba, Angelica archangelica , Angelica japonica, Angelica pubescens, Angelica pubescens f.biserrata , Angelica spp., Asterolasia phebalioides, Boenninghausenia albiflora, Cachrys sicula, Campylotropis hirtella, Campylotropis hirtella (FRANCH.) SCHNDL, Casimiroa edulis, Citrus bergamia , Citrus clementina, Citrus maxima , Citrus medica , Citrus paradisi , Cnidium japonicum, Cnidium monnieri , Deverra tortuosa, Deverra triradiata, Dinosperma melanophloium, Dinosperma stipitatum, Dorstenia asaroides, Dorstenia bahiensis, Dorstenia barnimiana, Dorstenia brasiliensis , Dorstenia bryonifolia, Dorstenia cayapiaa, Dorstenia contrajerva , Dorstenia drakena , Dorstenia excentria, Dorstenia foetida, Dorstenia heringerii, Dorstenia lindeniana, Dorstenia psilurus, Esenbeckia grandiflora, Tetradium daniellii, Euphorbia bivonae, Fagara mayu, Ferula mogoltavica, Ferula spp., Ficus cunninghamii, Flindersia bennettiana, Glehnia littoralis, Heracleum asperum, Heracleum dissectum, Heracleum granatense, Heracleum grandiflorum, Heracleum lehmannianum, Heracleum leskovii, Heracleum mantegazzianum, Heracleum moellendorffii Hance, Heracleum moellendorffii Hance var.paucivitatum, Heracleum nepalense , Heracleum pastinacifolium, Heracleum persicum, Heracleum ponticum, Heracleum pyrenaicum, Heracleum rapula, Heracleum sphondylium , Heracleum spp., Heracleum stevenii, Heracleum vicinum, Heracleum wallichii, Heracleum woroschiklowii, Heracleum yungningense, Hortia superba, Ligusticum multivittatum, Feronia limonia , Luvunga sp., Magydaris pastinacea, Melicope denhamii, Metrodorea flavida, Metrodorea nigra, Niphogeton ternata, Orixa japonica, Pamburus missionis, Pastinaca spp., Peucedanum officinale, Pimpinella saxifraga, Pimpinella spp., Pleurospermum rivulorum, Psilopeganum sinense, Pleurospermum angelicoides, Rhadinothamnus anceps, Ruta chalepensis L. , Ruta corsica, Ruta graveolens , Ruta montana, Ruta pinnata, Saposhnikovia divaricata, Seseli elatum, Seseli spp., Skimmia japonica, Skimmia laureola, Angelica capitellata, Stellera chamaejasme , Thamnosma montana, Thamnosma rhodesica, Thamnosma texana, Toddalia asiatica , Tordylium apulum , Trichocline incana, Zanthoxylum ailanthoides, Zanthoxylum belizense, Zanthoxylum ekmanii, Zanthoxylum mayu, Zanthoxylum ovalifolium and Zanthoxylum rhoifolium. It induces hepatic GSTs and is potent inhibitor of cytochrome P450 1A1/1B1.
Structure
Thumb
Synonyms
ValueSource
5,8-DimethoxypsoralenChEBI
5,8-DimethoxypsoraleneChEBI
4,9-Dimethoxy-7-oxofuro[3,2-g]chromeneHMDB
4,9-Dimethoxy-7H-furo(3,2-g) (1)benzopyran-7-oneHMDB
4,9-Dimethoxy-7H-furo[3,2-g]chromen-7-oneHMDB
4,9-Dimethoxy-7H-furo[3,2-g][1]benzopyran-7-oneHMDB
4,9-Dimethoxy-7H-furo[3,2-g][1]benzopyran-7-one, 9ciHMDB
4,9-Dimethoxy-furo[3,2-g]chromen-7-oneHMDB
4,9-DimethoxypsoralenHMDB
5, 8-DimethoxypsoraleneHMDB
5,8-Dimethoxy-6,7-furanocoumarinHMDB
7H-Furo(3,2-g)(1)benzopyran-7-one, 4,9-dimethoxy- (8ci)HMDB
DimethylpsoralenHMDB
Isopimpinellin (4,9-dimethoxypsoralen)HMDB
Chemical FormulaC13H10O5
Average Mass246.2180 Da
Monoisotopic Mass246.05282 Da
IUPAC Name4,9-dimethoxy-7H-furo[3,2-g]chromen-7-one
Traditional Nameisopimpinellin
CAS Registry Number482-27-9
SMILES
COC1=C2OC=CC2=C(OC)C2=C1OC(=O)C=C2
InChI Identifier
InChI=1S/C13H10O5/c1-15-10-7-3-4-9(14)18-12(7)13(16-2)11-8(10)5-6-17-11/h3-6H,1-2H3
InChI KeyDFMAXQKDIGCMTL-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Aeglopsis chevalieriLOTUS Database
Alocasia macrorrhizaLOTUS Database
Ammi majusLOTUS Database
Angelica acutilobaLOTUS Database
Angelica archangelicaPlant
Angelica japonicaLOTUS Database
Angelica keiskeiFooDB
Angelica pubescensLOTUS Database
Angelica pubescens f.biserrataPlant
Angelica spp.Plant
Apium graveolensFooDB
Apium graveolens var. dulceFooDB
    • Jian Tang, Yuangang Zhang, Thomas G. Hartman, Robert T. Rosen, and Chi Tang Ho. Free and glycosid...
Asterolasia phebalioidesLOTUS Database
Boenninghausenia albifloraLOTUS Database
Cachrys siculaLOTUS Database
Campylotropis hirtellaLOTUS Database
Campylotropis hirtella (FRANCH.) SCHNDLPlant
Casimiroa edulisLOTUS Database
Citrus aurantiifoliaFooDB
Citrus bergamiaPlant
Citrus clementinaPlant
Citrus limonFooDB
Citrus maximaPlant
Citrus medicaPlant
Citrus paradisiPlant
Cnidium japonicumLOTUS Database
Cnidium monnieriPlant
Daucus carotaFooDB
Daucus carota ssp. sativusFooDB
Deverra tortuosaLOTUS Database
Deverra triradiataLOTUS Database
Dinosperma melanophloiumLOTUS Database
Dinosperma stipitatumLOTUS Database
Dorstenia asaroidesPlant
Dorstenia bahiensisPlant
Dorstenia barnimianaPlant
Dorstenia brasiliensisPlant
Dorstenia bryonifoliaPlant
Dorstenia cayapiaaPlant
Dorstenia contrajervaPlant
Dorstenia drakenaPlant
Dorstenia excentriaPlant
Dorstenia foetidaLOTUS Database
Dorstenia heringeriiPlant
Dorstenia lindenianaPlant
Dorstenia psilurusPlant
Esenbeckia grandifloraLOTUS Database
Euodia hupehensisLOTUS Database
Euphorbia bivonaeLOTUS Database
Fagara mayuPlant
Ferula mogoltavicaLOTUS Database
Ferula spp.Plant
Ficus cunninghamiiPlant
Flindersia bennettianaPlant
Foeniculum vulgareFooDB
Glehnia littoralisLOTUS Database
Heracleum asperumPlant
Heracleum dissectumPlant
Heracleum granatensePlant
Heracleum grandiflorumPlant
Heracleum lehmannianumPlant
Heracleum leskoviiLOTUS Database
Heracleum mantegazzianumLOTUS Database
Heracleum moellendorffii HancePlant
Heracleum moellendorffii Hance var.paucivitatumPlant
Heracleum nepalensePlant
Heracleum pastinacifoliumLOTUS Database
Heracleum persicumLOTUS Database
Heracleum ponticumPlant
Heracleum pyrenaicumPlant
Heracleum rapulaLOTUS Database
Heracleum sphondyliumPlant
Heracleum spp.Plant
Heracleum steveniiLOTUS Database
Heracleum vicinumLOTUS Database
Heracleum wallichiiPlant
Heracleum woroschiklowiiPlant
Heracleum yungningensePlant
Hortia superbaLOTUS Database
Ligusticum multivittatumPlant
Limonia acidissimaPlant
Luvunga sp.Plant
Magydaris pastinaceaLOTUS Database
Melicope denhamiiLOTUS Database
Metrodorea flavidaLOTUS Database
Metrodorea nigraLOTUS Database
Niphogeton ternataPlant
Orixa japonicaLOTUS Database
Pamburus missionisLOTUS Database
Pastinaca sativaFooDB
Pastinaca spp.Plant
Petroselinum crispumFooDB
Peucedanum officinaleLOTUS Database
Pimpinella anisumFooDB
Pimpinella saxifragaLOTUS Database
Pimpinella spp.Plant
Pleurospermum rivulorumLOTUS Database
Psilopeganum sinenseLOTUS Database
Pterocyclus angelicoidesPlant
Rhadinothamnus ancepsLOTUS Database
Ruta chalepensisPlant
Ruta corsicaLOTUS Database
Ruta graveolensPlant
Ruta montanaLOTUS Database
Ruta pinnataLOTUS Database
Saposhnikovia divaricataLOTUS Database
Seseli elatumLOTUS Database
Seseli spp.Plant
Skimmia japonicaLOTUS Database
Skimmia laureolaPlant
Sphenosciadium capitellatumLOTUS Database
Stellera chamaejasmePlant
Thamnosma montanaLOTUS Database
Thamnosma rhodesicaLOTUS Database
Thamnosma texanaLOTUS Database
Toddalia asiaticaPlant
Tordylium apulumPlant
Trichocline incanaPlant
Zanthoxylum ailanthoidesLOTUS Database
Zanthoxylum belizensePlant
Zanthoxylum ekmaniiLOTUS Database
Zanthoxylum mayuLOTUS Database
Zanthoxylum ovalifoliumLOTUS Database
Zanthoxylum rhoifoliumLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 8-methoxypsoralens. These are psoralens containing a methoxy group attached at the C8 position of the psoralen group.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassCoumarins and derivatives
Sub ClassFuranocoumarins
Direct Parent8-methoxypsoralens
Alternative Parents
Substituents
  • 5-methoxypsoralen
  • 8-methoxypsoralen
  • 1-benzopyran
  • Benzopyran
  • Benzofuran
  • Anisole
  • Alkyl aryl ether
  • Pyranone
  • Benzenoid
  • Pyran
  • Heteroaromatic compound
  • Furan
  • Lactone
  • Oxacycle
  • Organoheterocyclic compound
  • Ether
  • Organic oxygen compound
  • Organic oxide
  • Organooxygen compound
  • Hydrocarbon derivative
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP2.01ALOGPS
logP1.63ChemAxon
logS-3.2ALOGPS
pKa (Strongest Basic)-2.9ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area57.9 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity63.32 m³·mol⁻¹ChemAxon
Polarizability23.84 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDHMDB0034312
DrugBank IDNot Available
Phenol Explorer Compound ID720
FoodDB IDFDB012661
KNApSAcK IDC00000583
Chemspider ID61391
KEGG Compound IDC02162
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkIsopimpinellin
METLIN IDNot Available
PubChem Compound68079
PDB IDNot Available
ChEBI ID28853
Good Scents IDNot Available
References
General ReferencesNot Available