NP-MRD: Showing NP-Card for 24-Methylene-31-nor-5alpha-lanost-9(11)-3beta-ol (NP0046857)

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Record Information

Version

2.0

Created at

2022-03-17 20:30:39 UTC

Updated at

2022-03-17 20:30:39 UTC

NP-MRD ID

NP0046857

Secondary Accession Numbers

None

Natural Product Identification

Common Name

24-Methylene-31-nor-5alpha-lanost-9(11)-3beta-ol

Description

24-Methylene-31-nor-5alpha-lanost-9(11)-3beta-ol belongs to the class of organic compounds known as ergosterols and derivatives. These are steroids containing ergosta-5,7,22-trien-3beta-ol or a derivative thereof, which is based on the 3beta-hydroxylated ergostane skeleton. 24-Methylene-31-nor-5alpha-lanost-9(11)-3beta-ol is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL SDF PDB SMILES InChI


  Mrv0541 02241212542D          

 31 34  0  0  0  0            999 V2000
   12.1886   -3.5809    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1886   -4.4059    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4741   -4.8184    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7597   -4.4059    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   10.0452   -4.8184    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3307   -4.4059    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    8.6162   -4.8184    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.3307   -3.5809    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0452   -3.1684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7597   -3.5809    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   10.7597   -2.7559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4741   -3.1684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4741   -2.3434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1886   -1.9309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0452   -5.6434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6176   -1.9309    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   12.9031   -2.3434    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   12.9031   -3.1684    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   14.3320   -3.1684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3320   -2.3434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6176   -1.1059    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   14.3320   -0.6934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9031   -0.6934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0465   -1.1059    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.7610   -0.6934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.7610    0.1316    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.4754   -1.1059    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.4754   -1.9309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.1899   -0.6934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8639   -1.4371    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9031   -3.9934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 18  1  1  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  4  3  1  0  0  0  0
  4  5  1  1  0  0  0
  5  6  1  0  0  0  0
  6  7  1  1  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
 10  9  1  0  0  0  0
  4 10  1  0  0  0  0
 10 11  1  1  0  0  0
 10 12  1  0  0  0  0
  1 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 17  1  0  0  0  0
  5 15  1  0  0  0  0
 16 17  1  0  0  0  0
 19 20  1  0  0  0  0
 16 20  1  0  0  0  0
 18 19  1  0  0  0  0
 17 18  1  0  0  0  0
 16 21  1  1  0  0  0
 21 22  1  0  0  0  0
 21 23  1  6  0  0  0
 22 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
 27 28  1  0  0  0  0
 27 29  1  0  0  0  0
 17 30  1  1  0  0  0
 18 31  1  6  0  0  0
M  END


  Mrv0541 02241212542D          

 31 34  0  0  0  0            999 V2000
   12.1886   -3.5809    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1886   -4.4059    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4741   -4.8184    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7597   -4.4059    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   10.0452   -4.8184    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3307   -4.4059    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    8.6162   -4.8184    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.3307   -3.5809    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0452   -3.1684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7597   -3.5809    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   10.7597   -2.7559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4741   -3.1684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4741   -2.3434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1886   -1.9309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0452   -5.6434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6176   -1.9309    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   12.9031   -2.3434    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   12.9031   -3.1684    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   14.3320   -3.1684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3320   -2.3434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6176   -1.1059    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   14.3320   -0.6934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9031   -0.6934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0465   -1.1059    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.7610   -0.6934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.7610    0.1316    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.4754   -1.1059    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.4754   -1.9309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.1899   -0.6934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8639   -1.4371    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9031   -3.9934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 18  1  1  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  4  3  1  0  0  0  0
  4  5  1  1  0  0  0
  5  6  1  0  0  0  0
  6  7  1  1  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
 10  9  1  0  0  0  0
  4 10  1  0  0  0  0
 10 11  1  1  0  0  0
 10 12  1  0  0  0  0
  1 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 17  1  0  0  0  0
  5 15  1  0  0  0  0
 16 17  1  0  0  0  0
 19 20  1  0  0  0  0
 16 20  1  0  0  0  0
 18 19  1  0  0  0  0
 17 18  1  0  0  0  0
 16 21  1  1  0  0  0
 21 22  1  0  0  0  0
 21 23  1  6  0  0  0
 22 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
 27 28  1  0  0  0  0
 27 29  1  0  0  0  0
 17 30  1  1  0  0  0
 18 31  1  6  0  0  0
M  END
> <DATABASE_ID>
NP0046857

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(C)C(=C)CC[C@@H](C)[C@H]1CC[C@@]2(C)C3CC[C@H]4C(C)[C@@H](O)CC[C@]4(C)C3=CC[C@]12C

> <INCHI_IDENTIFIER>
InChI=1S/C30H50O/c1-19(2)20(3)9-10-21(4)23-13-17-30(8)26-12-11-24-22(5)27(31)15-16-28(24,6)25(26)14-18-29(23,30)7/h14,19,21-24,26-27,31H,3,9-13,15-18H2,1-2,4-8H3/t21-,22?,23-,24+,26?,27+,28+,29-,30+/m1/s1

> <INCHI_KEY>
FPGXQODNUNHTTC-JEUQCIQHSA-N

> <FORMULA>
C30H50O

> <MOLECULAR_WEIGHT>
426.7174

> <EXACT_MASS>
426.386166222

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_AVERAGE_POLARIZABILITY>
55.10983241994387

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2S,5S,7S,11S,14R,15R)-2,6,11,15-tetramethyl-14-[(2R)-6-methyl-5-methylideneheptan-2-yl]tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-1(17)-en-5-ol

> <ALOGPS_LOGP>
7.67

> <JCHEM_LOGP>
7.717282262333335

> <ALOGPS_LOGS>
-6.50

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
18.9572524508664

> <JCHEM_PKA_STRONGEST_BASIC>
-1.0678977779910372

> <JCHEM_POLAR_SURFACE_AREA>
20.23

> <JCHEM_REFRACTIVITY>
133.88929999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.35e-04 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2S,5S,7S,11S,14R,15R)-2,6,11,15-tetramethyl-14-[(2R)-6-methyl-5-methylideneheptan-2-yl]tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-1(17)-en-5-ol

> <JCHEM_VEBER_RULE>
1

$$$$

HEADER    PROTEIN                                 24-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-FEB-12         0                                  
HETATM    1  C   UNK     0      22.752  -6.684   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      22.752  -8.224   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      21.418  -8.994   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      20.085  -8.224   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      18.751  -8.994   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      17.417  -8.224   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0      16.084  -8.994   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0      17.417  -6.684   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      18.751  -5.914   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      20.085  -6.684   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      20.085  -5.144   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      21.418  -5.914   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      21.418  -4.374   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      22.752  -3.604   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      18.751 -10.534   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      25.420  -3.604   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      24.086  -4.374   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      24.086  -5.914   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      26.753  -5.914   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      26.753  -4.374   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      25.420  -2.064   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      26.753  -1.294   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      24.086  -1.294   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      28.087  -2.064   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      29.421  -1.294   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      29.421   0.246   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      30.754  -2.064   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      30.754  -3.604   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      32.088  -1.294   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      24.013  -2.683   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      24.086  -7.454   0.000  0.00  0.00           C+0
CONECT    1   18    2   12                                                  
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5   10                                                  
CONECT    5    4    6   15                                                  
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9    4   11   12                                             
CONECT   11   10                                                            
CONECT   12   10    1   13                                                  
CONECT   13   12   14                                                       
CONECT   14   13   17                                                       
CONECT   15    5                                                            
CONECT   16   17   20   21                                                  
CONECT   17   14   16   18   30                                             
CONECT   18    1   19   17   31                                             
CONECT   19   20   18                                                       
CONECT   20   19   16                                                       
CONECT   21   16   22   23                                                  
CONECT   22   21   24                                                       
CONECT   23   21                                                            
CONECT   24   22   25                                                       
CONECT   25   24   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28   29                                                  
CONECT   28   27                                                            
CONECT   29   27                                                            
CONECT   30   17                                                            
CONECT   31   18                                                            
MASTER        0    0    0    0    0    0    0    0   31    0   68    0
END

View in JSmol

Synonyms

Value	Source
24-Methylene-31-nor-5a-lanost-9(11)-3b-ol	Generator
24-Methylene-31-nor-5α-lanost-9(11)-3β-ol	Generator

Chemical Formula

C₃₀H₅₀O

Average Mass

426.7174 Da

Monoisotopic Mass

426.38617 Da

IUPAC Name

(2S,5S,7S,11S,14R,15R)-2,6,11,15-tetramethyl-14-[(2R)-6-methyl-5-methylideneheptan-2-yl]tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-1(17)-en-5-ol

Traditional Name

(2S,5S,7S,11S,14R,15R)-2,6,11,15-tetramethyl-14-[(2R)-6-methyl-5-methylideneheptan-2-yl]tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-1(17)-en-5-ol

CAS Registry Number

Not Available

SMILES

CC(C)C(=C)CC[C@@H](C)[C@H]1CC[C@@]2(C)C3CC[C@H]4C(C)[C@@H](O)CC[C@]4(C)C3=CC[C@]12C

InChI Identifier

InChI=1S/C30H50O/c1-19(2)20(3)9-10-21(4)23-13-17-30(8)26-12-11-24-22(5)27(31)15-16-28(24,6)25(26)14-18-29(23,30)7/h14,19,21-24,26-27,31H,3,9-13,15-18H2,1-2,4-8H3/t21-,22?,23-,24+,26?,27+,28+,29-,30+/m1/s1

InChI Key

FPGXQODNUNHTTC-JEUQCIQHSA-N

Experimental Spectra

Not Available

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Musa x paradisiaca	FooDB	Dr. Duke's Phytochemical and Ethnobotanical Databases

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as ergosterols and derivatives. These are steroids containing ergosta-5,7,22-trien-3beta-ol or a derivative thereof, which is based on the 3beta-hydroxylated ergostane skeleton.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Steroids and steroid derivatives

Sub Class

Ergostane steroids

Direct Parent

Ergosterols and derivatives

Alternative Parents

Substituents

Ergosterol-skeleton
14-alpha-methylsteroid
3-beta-hydroxysteroid
Hydroxysteroid
3-hydroxysteroid
Cyclic alcohol
Secondary alcohol
Organic oxygen compound
Hydrocarbon derivative
Organooxygen compound
Alcohol
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	7.67	ALOGPS
logP	7.72	ChemAxon
logS	-6.5	ALOGPS
pKa (Strongest Acidic)	18.96	ChemAxon
pKa (Strongest Basic)	-1.1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	1	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	20.23 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	133.89 m³·mol⁻¹	ChemAxon
Polarizability	55.11 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

FDB006228

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for 24-Methylene-31-nor-5alpha-lanost-9(11)-3beta-ol (NP0046857)

MOL for NP0046857 (24-Methylene-31-nor-5alpha-lanost-9(11)-3beta-ol)

3D MOL for NP0046857 (24-Methylene-31-nor-5alpha-lanost-9(11)-3beta-ol)

3D SDF for NP0046857 (24-Methylene-31-nor-5alpha-lanost-9(11)-3beta-ol)

3D-SDF for NP0046857 (24-Methylene-31-nor-5alpha-lanost-9(11)-3beta-ol)

PDB for NP0046857 (24-Methylene-31-nor-5alpha-lanost-9(11)-3beta-ol)

3D PDB for NP0046857 (24-Methylene-31-nor-5alpha-lanost-9(11)-3beta-ol)

SMILES for NP0046857 (24-Methylene-31-nor-5alpha-lanost-9(11)-3beta-ol)

INCHI for NP0046857 (24-Methylene-31-nor-5alpha-lanost-9(11)-3beta-ol)

Structure for NP0046857 (24-Methylene-31-nor-5alpha-lanost-9(11)-3beta-ol)

3D Structure for NP0046857 (24-Methylene-31-nor-5alpha-lanost-9(11)-3beta-ol)