Np mrd loader

Showing NP-Card for Ytterbium (NP0046257)

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Record Information
Version2.0
Created at2022-03-17 19:55:07 UTC
Updated at2022-03-17 19:55:07 UTC
NP-MRD IDNP0046257
Secondary Accession NumbersNone
Natural Product Identification
Common NameYtterbium
DescriptionNot Available
Structure
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MOLSDFPDBSMILESInChI

MOL for NP0046257 (Ytterbium)


  Mrv0541 02241221012D          

  1  0  0  0  0  0            999 V2000
    0.0000    0.0000    0.0000 Yb  0  0  0  0  0  0  0  0  0  0  0  0
M  END
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3D MOL for NP0046257 (Ytterbium)

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3D SDF for NP0046257 (Ytterbium)

  Mrv0541 02241221012D          

  1  0  0  0  0  0            999 V2000
    0.0000    0.0000    0.0000 Yb  0  0  0  0  0  0  0  0  0  0  0  0
M  END
> <DATABASE_ID>
NP0046257

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[Yb]

> <INCHI_IDENTIFIER>
InChI=1S/Yb

> <INCHI_KEY>
NAWDYIZEMPQZHO-UHFFFAOYSA-N

> <FORMULA>
Yb

> <MOLECULAR_WEIGHT>
173.04

> <EXACT_MASS>
173.938858101

> <JCHEM_ACCEPTOR_COUNT>
0

> <JCHEM_AVERAGE_POLARIZABILITY>
1.7784

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
ytterbium

> <JCHEM_LOGP>
0

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_POLAR_SURFACE_AREA>
0

> <JCHEM_REFRACTIVITY>
0

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
ytterbium

> <JCHEM_VEBER_RULE>
1

$$$$

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3D-SDF for NP0046257 (Ytterbium)
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PDB for NP0046257 (Ytterbium)
HEADER    PROTEIN                                 24-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-FEB-12         0                                  
HETATM    1 Yb   UNK     0       0.000   0.000   0.000  0.00  0.00          Yb+0
MASTER        0    0    0    0    0    0    0    0    1    0    0    0
END

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3D PDB for NP0046257 (Ytterbium)
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SMILES for NP0046257 (Ytterbium)
[Yb]
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INCHI for NP0046257 (Ytterbium)
InChI=1S/Yb
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View in JSmol
Synonyms
ValueSource
70YbChEBI
YbChEBI
YterbioChEBI
Chemical FormulaYb
Average Mass173.0400 Da
Monoisotopic Mass173.93886 Da
IUPAC Nameytterbium
Traditional Nameytterbium
CAS Registry Number7440-64-4
SMILES
[Yb]
InChI Identifier
InChI=1S/Yb
InChI KeyNAWDYIZEMPQZHO-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Anacardium occidentaleFooDB
Bertholletia excelsaFooDB
Brassica oleracea var. capitataFooDB
Cocos nuciferaFooDB
Corylus avellanaFooDB
Diospyros virginianaFooDB
Juglans cinereaFooDB
Juglans nigra L.FooDB
Lactuca sativaFooDB
Pistacia veraFooDB
Prunus dulcisFooDB
Zea mays L.FooDB
Chemical Taxonomy
Description Belongs to the class of inorganic compounds known as homogeneous lanthanide compounds. These are inorganic compounds containing only metal atoms, with the largest atom being a lanthanide atom.
KingdomInorganic compounds  
Super ClassHomogeneous metal compounds  
ClassHomogeneous lanthanide compounds  
Sub ClassNot Available
Direct ParentHomogeneous lanthanide compounds  
Alternative ParentsNot Available
Substituents
  • Homogeneous lanthanide
Molecular FrameworkNot Available
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count0ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area0 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity0 m³·mol⁻¹ChemAxon
Polarizability1.78 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDFDB003793  
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkYtterbium  
METLIN IDNot Available
PubChem Compound23992  
PDB IDNot Available
ChEBI ID33381  
Good Scents IDNot Available
References
General ReferencesNot Available