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Showing NP-Card for S-Methyl-L-cysteine sulfoxide (NP0046218)

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Record Information
Version2.0
Created at2022-03-17 19:50:24 UTC
Updated at2022-03-17 19:50:24 UTC
NP-MRD IDNP0046218
Secondary Accession NumbersNone
Natural Product Identification
Common NameS-Methyl-L-cysteine sulfoxide
Description S-Methyl-L-cysteine sulfoxide is found in Allium cepa and Brassica oleracea.
Structure
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MOLSDFPDBSMILESInChI

MOL for NP0046218 (S-Methyl-L-cysteine sulfoxide)


  Mrv0541 02241212382D          

  9  8  0  0  0  0            999 V2000
    4.6184    1.6164    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.9039    2.0289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1895    1.6164    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    3.1895    0.7914    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4750    2.0289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3329    2.0289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0474    1.6164    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.3329    2.8539    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6184    0.7914    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  1  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  2  0  0  0  0
  1  9  1  1  0  0  0
M  END
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3D MOL for NP0046218 (S-Methyl-L-cysteine sulfoxide)

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3D SDF for NP0046218 (S-Methyl-L-cysteine sulfoxide)

  Mrv0541 02241212382D          

  9  8  0  0  0  0            999 V2000
    4.6184    1.6164    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.9039    2.0289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1895    1.6164    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    3.1895    0.7914    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4750    2.0289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3329    2.0289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0474    1.6164    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.3329    2.8539    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6184    0.7914    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  1  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  2  0  0  0  0
  1  9  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0046218

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CS(=O)C[C@H](N)C(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C4H9NO3S/c1-9(8)2-3(5)4(6)7/h3H,2,5H2,1H3,(H,6,7)/t3-,9?/m0/s1

> <INCHI_KEY>
ZZLHPCSGGOGHFW-BUKSALPDSA-N

> <FORMULA>
C4H9NO3S

> <MOLECULAR_WEIGHT>
151.184

> <EXACT_MASS>
151.030313849

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_AVERAGE_POLARIZABILITY>
14.049578301530866

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2R)-2-amino-3-methanesulfinylpropanoic acid

> <ALOGPS_LOGP>
-2.56

> <JCHEM_LOGP>
-4.624623685245077

> <ALOGPS_LOGS>
-0.48

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
1.609491919121825

> <JCHEM_PKA_STRONGEST_BASIC>
8.448660956659266

> <JCHEM_POLAR_SURFACE_AREA>
80.39

> <JCHEM_REFRACTIVITY>
34.587700000000005

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
5.04e+01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2R)-2-amino-3-methanesulfinylpropanoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

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3D-SDF for NP0046218 (S-Methyl-L-cysteine sulfoxide)
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PDB for NP0046218 (S-Methyl-L-cysteine sulfoxide)
HEADER    PROTEIN                                 24-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-FEB-12         0                                  
HETATM    1  C   UNK     0       8.621   3.017   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       7.287   3.787   0.000  0.00  0.00           C+0
HETATM    3  S   UNK     0       5.954   3.017   0.000  0.00  0.00           S+0
HETATM    4  O   UNK     0       5.954   1.477   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       4.620   3.787   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       9.955   3.787   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0      11.288   3.017   0.000  0.00  0.00           O+0
HETATM    8  O   UNK     0       9.955   5.327   0.000  0.00  0.00           O+0
HETATM    9  N   UNK     0       8.621   1.477   0.000  0.00  0.00           N+0
CONECT    1    2    6    9                                                  
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3                                                            
CONECT    6    1    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6                                                            
CONECT    9    1                                                            
MASTER        0    0    0    0    0    0    0    0    9    0   16    0
END

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3D PDB for NP0046218 (S-Methyl-L-cysteine sulfoxide)
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SMILES for NP0046218 (S-Methyl-L-cysteine sulfoxide)
CS(=O)C[C@H](N)C(O)=O
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INCHI for NP0046218 (S-Methyl-L-cysteine sulfoxide)
InChI=1S/C4H9NO3S/c1-9(8)2-3(5)4(6)7/h3H,2,5H2,1H3,(H,6,7)/t3-,9?/m0/s1
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Synonyms
ValueSource
S-Methyl-L-cysteine sulphoxideGenerator
S-Methyl-L-cysteinesulfoxideMeSH
S-Methylcysteine sulfoxideMeSH
Kale anemia factorMeSH
MethiinMeSH
Methiin, (DL-ala)-isomerMeSH
Methiin, (L-ala)-(R)-isomerMeSH
Methiin, (L-ala)-(S)-isomerMeSH
Methiin, (L-ala)-isomerMeSH
Chemical FormulaC4H9NO3S
Average Mass151.1840 Da
Monoisotopic Mass151.03031 Da
IUPAC Name(2R)-2-amino-3-methanesulfinylpropanoic acid
Traditional Name(2R)-2-amino-3-methanesulfinylpropanoic acid
CAS Registry NumberNot Available
SMILES
CS(=O)C[C@H](N)C(O)=O
InChI Identifier
InChI=1S/C4H9NO3S/c1-9(8)2-3(5)4(6)7/h3H,2,5H2,1H3,(H,6,7)/t3-,9?/m0/s1
InChI KeyZZLHPCSGGOGHFW-BUKSALPDSA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Allium cepaLOTUS Database
Allium sativumFooDB
Brassica oleraceaLOTUS Database
Raphanus sativusFooDB
Chemical Taxonomy
Description Belongs to the class of organic compounds known as l-alpha-amino acids. These are alpha amino acids which have the L-configuration of the alpha-carbon atom.
KingdomOrganic compounds  
Super ClassOrganic acids and derivatives  
ClassCarboxylic acids and derivatives  
Sub ClassAmino acids, peptides, and analogues  
Direct ParentL-alpha-amino acids  
Alternative Parents
Substituents
  • L-alpha-amino acid
    • 

  • Sulfoxide
    • 

  • Amino acid
    • 

  • Carboxylic acid
    • 

  • Monocarboxylic acid or derivatives
    • 

  • Sulfinyl compound
    • 

  • Amine
    • 

  • Hydrocarbon derivative
    • 

  • Organic oxide
    • 

  • Organopnictogen compound
    • 

  • Primary amine
    • 

  • Organosulfur compound
    • 

  • Organooxygen compound
    • 

  • Organonitrogen compound
    • 

  • Organic oxygen compound
    • 

  • Primary aliphatic amine
    • 

  • Organic nitrogen compound
    • 

  • Carbonyl group
    • 

  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-2.6ALOGPS
logP-4.6ChemAxon
logS-0.48ALOGPS
pKa (Strongest Acidic)1.61ChemAxon
pKa (Strongest Basic)8.45ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area80.39 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity34.59 m³·mol⁻¹ChemAxon
Polarizability14.05 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDFDB003687  
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound182092  
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General ReferencesNot Available