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Showing NP-Card for Methyl-trans-1-propenyl thiosulfinate (NP0046204)

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Record Information
Version1.0
Created at2022-03-17 19:50:10 UTC
Updated at2022-03-17 19:50:10 UTC
NP-MRD IDNP0046204
Secondary Accession NumbersNone
Natural Product Identification
Common NameMethyl-trans-1-propenyl thiosulfinate
Description Methyl-trans-1-propenyl thiosulfinate is found in Allium ascalonicum.
Structure
Thumb
MOLSDFPDBSMILESInChI

MOL for NP0046204 (Methyl-trans-1-propenyl thiosulfinate)


  Mrv0541 02241212372D          

  7  6  0  0  0  0            999 V2000
   -0.8989    2.7991    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1844    3.2116    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    0.5301    2.7991    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    1.2445    3.2116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9590    2.7991    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6735    3.2116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5301    1.9741    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  5  6  1  0  0  0  0
  3  7  2  0  0  0  0
M  END
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3D MOL for NP0046204 (Methyl-trans-1-propenyl thiosulfinate)

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3D SDF for NP0046204 (Methyl-trans-1-propenyl thiosulfinate)

  Mrv0541 02241212372D          

  7  6  0  0  0  0            999 V2000
   -0.8989    2.7991    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1844    3.2116    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    0.5301    2.7991    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    1.2445    3.2116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9590    2.7991    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6735    3.2116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5301    1.9741    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  5  6  1  0  0  0  0
  3  7  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0046204

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CSS(=O)\C=C\C

> <INCHI_IDENTIFIER>
InChI=1S/C4H8OS2/c1-3-4-7(5)6-2/h3-4H,1-2H3/b4-3+

> <INCHI_KEY>
LXYFYPXBSIMFKX-ONEGZZNKSA-N

> <FORMULA>
C4H8OS2

> <MOLECULAR_WEIGHT>
136.236

> <EXACT_MASS>
136.001656258

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_AVERAGE_POLARIZABILITY>
13.796401533074288

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
{[(1E)-prop-1-ene-1-sulfinyl]sulfanyl}methane

> <ALOGPS_LOGP>
0.66

> <JCHEM_LOGP>
1.6616000000000002

> <ALOGPS_LOGS>
-0.85

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-5.556943318738613

> <JCHEM_POLAR_SURFACE_AREA>
17.07

> <JCHEM_REFRACTIVITY>
35.9281

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.94e+01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
{[(1E)-prop-1-ene-1-sulfinyl]sulfanyl}methane

> <JCHEM_VEBER_RULE>
1

$$$$

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3D-SDF for NP0046204 (Methyl-trans-1-propenyl thiosulfinate)
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PDB for NP0046204 (Methyl-trans-1-propenyl thiosulfinate)
HEADER    PROTEIN                                 24-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-FEB-12         0                                  
HETATM    1  C   UNK     0      -1.678   5.225   0.000  0.00  0.00           C+0
HETATM    2  S   UNK     0      -0.344   5.995   0.000  0.00  0.00           S+0
HETATM    3  S   UNK     0       0.990   5.225   0.000  0.00  0.00           S+0
HETATM    4  C   UNK     0       2.323   5.995   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       3.657   5.225   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       4.991   5.995   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0       0.990   3.685   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    7                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5                                                            
CONECT    7    3                                                            
MASTER        0    0    0    0    0    0    0    0    7    0   12    0
END

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3D PDB for NP0046204 (Methyl-trans-1-propenyl thiosulfinate)
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SMILES for NP0046204 (Methyl-trans-1-propenyl thiosulfinate)
CSS(=O)\C=C\C
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INCHI for NP0046204 (Methyl-trans-1-propenyl thiosulfinate)
InChI=1S/C4H8OS2/c1-3-4-7(5)6-2/h3-4H,1-2H3/b4-3+
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Synonyms
ValueSource
Methyl-trans-1-propenyl thiosulfinic acidGenerator
Methyl-trans-1-propenyl thiosulphinateGenerator
Methyl-trans-1-propenyl thiosulphinic acidGenerator
Methyl-1-propenyl thiosulfinic acidGenerator
Methyl-1-propenyl thiosulphinateGenerator
Methyl-1-propenyl thiosulphinic acidGenerator
Chemical FormulaC4H8OS2
Average Mass136.2360 Da
Monoisotopic Mass136.00166 Da
IUPAC Name{[(1E)-prop-1-ene-1-sulfinyl]sulfanyl}methane
Traditional Name{[(1E)-prop-1-ene-1-sulfinyl]sulfanyl}methane
CAS Registry NumberNot Available
SMILES
CSS(=O)\C=C\C
InChI Identifier
InChI=1S/C4H8OS2/c1-3-4-7(5)6-2/h3-4H,1-2H3/b4-3+
InChI KeyLXYFYPXBSIMFKX-ONEGZZNKSA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Allium ascalonicumLOTUS Database
Allium sativumFooDB
Chemical Taxonomy
Description Belongs to the class of organic compounds known as thiosulfinic acid esters. These are organic compounds containing an ester of thiosulfinic acid with the general structure RS(=S)OR' (R, R'=alkyl, aryl).
KingdomOrganic compounds  
Super ClassOrganic acids and derivatives  
ClassThiosulfinic acid esters  
Sub ClassNot Available
Direct ParentThiosulfinic acid esters  
Alternative Parents
Substituents
  • Thiosulfinic acid ester
    • 

  • Sulfenyl compound
    • 

  • Sulfinyl compound
    • 

  • Organic oxygen compound
    • 

  • Organic oxide
    • 

  • Hydrocarbon derivative
    • 

  • Organosulfur compound
    • 

  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.66ALOGPS
logP1.66ChemAxon
logS-0.85ALOGPS
pKa (Strongest Basic)-5.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area17.07 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity35.93 m³·mol⁻¹ChemAxon
Polarizability13.8 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDFDB003651  
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5319763  
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General ReferencesNot Available