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Record Information
Version2.0
Created at2022-02-24 21:17:05 UTC
Updated at2022-02-24 21:17:05 UTC
NP-MRD IDNP0044811
Secondary Accession NumbersNone
Natural Product Identification
Common NameWithaperuvin
DescriptionWithaperuvin belongs to the class of organic compounds known as withanolides and derivatives. These are c28 steroids structurally characterized by an ergostane skeleton usually functionalized at carbons 1, 22 and 26 to form a lactone ring. Thus, withaperuvin is considered to be a sterol. Withaperuvin was first documented in 2010 (PMID: 20628942). Based on a literature review a significant number of articles have been published on Withaperuvin (PMID: 31402707) (PMID: 33395575) (PMID: 32751610) (PMID: 27920947) (PMID: 27382976) (PMID: 23887853).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC28H40O9
Average Mass520.6190 Da
Monoisotopic Mass520.26723 Da
IUPAC Name(6R)-6-[(1S)-1-hydroxy-1-[(1S,2R,6S,7S,8S,10R,11R,14S,15S)-6,7,8,11,14-pentahydroxy-2,15-dimethyl-3-oxotetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-4-en-14-yl]ethyl]-3,4-dimethyl-5,6-dihydro-2H-pyran-2-one
Traditional Name(6R)-6-[(1S)-1-hydroxy-1-[(1S,2R,6S,7S,8S,10R,11R,14S,15S)-6,7,8,11,14-pentahydroxy-2,15-dimethyl-3-oxotetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-4-en-14-yl]ethyl]-3,4-dimethyl-5,6-dihydropyran-2-one
CAS Registry NumberNot Available
SMILES
[H][C@@]1(CC(C)=C(C)C(=O)O1)[C@](C)(O)[C@]1(O)CC[C@@]2(O)[C@]3([H])C[C@H](O)[C@]4(O)[C@@H](O)C=CC(=O)[C@]4(C)[C@@]3([H])CC[C@]12C
InChI Identifier
InChI=1S/C28H40O9/c1-14-12-21(37-22(32)15(14)2)25(5,33)27(35)11-10-26(34)17-13-20(31)28(36)19(30)7-6-18(29)24(28,4)16(17)8-9-23(26,27)3/h6-7,16-17,19-21,30-31,33-36H,8-13H2,1-5H3/t16-,17+,19-,20-,21+,23-,24-,25-,26+,27-,28+/m0/s1
InChI KeyXLUKITCTLVOOAW-VQDSAXESSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 100 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 125 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 150 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 175 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 225 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 25 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 250 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, Chloroform-d, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
  • Plant
  • Chemical Taxonomy
    Description Belongs to the class of organic compounds known as withanolides and derivatives. These are c28 steroids structurally characterized by an ergostane skeleton usually functionalized at carbons 1, 22 and 26 to form a lactone ring.
    KingdomOrganic compounds
    Super ClassLipids and lipid-like molecules
    ClassSteroids and steroid derivatives
    Sub ClassSteroid lactones
    Direct ParentWithanolides and derivatives
    Alternative Parents
    Substituents
    • Withanolide-skeleton
    • 20-hydroxysteroid
    • 4-hydroxysteroid
    • 14-hydroxysteroid
    • 6-hydroxysteroid
    • 5-hydroxysteroid
    • Hydroxysteroid
    • 1-oxosteroid
    • Oxosteroid
    • 17-hydroxysteroid
    • Cyclohexenone
    • Dihydropyranone
    • Pyran
    • Tertiary alcohol
    • Cyclic alcohol
    • Alpha,beta-unsaturated carboxylic ester
    • Enoate ester
    • Secondary alcohol
    • Lactone
    • Ketone
    • Carboxylic acid ester
    • Polyol
    • Oxacycle
    • Organoheterocyclic compound
    • Monocarboxylic acid or derivatives
    • Carboxylic acid derivative
    • Organic oxygen compound
    • Hydrocarbon derivative
    • Organic oxide
    • Alcohol
    • Carbonyl group
    • Organooxygen compound
    • Aliphatic heteropolycyclic compound
    Molecular FrameworkAliphatic heteropolycyclic compounds
    External DescriptorsNot Available
    Physical Properties
    StateNot Available
    Experimental Properties
    PropertyValueReference
    Melting PointNot AvailableNot Available
    Boiling PointNot AvailableNot Available
    Water SolubilityNot AvailableNot Available
    LogPNot AvailableNot Available
    Predicted Properties
    PropertyValueSource
    logP0.64ALOGPS
    logP0.61ChemAxon
    logS-2.7ALOGPS
    pKa (Strongest Acidic)12.17ChemAxon
    pKa (Strongest Basic)-3.2ChemAxon
    Physiological Charge0ChemAxon
    Hydrogen Acceptor Count8ChemAxon
    Hydrogen Donor Count6ChemAxon
    Polar Surface Area164.75 ŲChemAxon
    Rotatable Bond Count2ChemAxon
    Refractivity133.13 m³·mol⁻¹ChemAxon
    Polarizability54.44 ųChemAxon
    Number of Rings5ChemAxon
    BioavailabilityNoChemAxon
    Rule of FiveNoChemAxon
    Ghose FilterNoChemAxon
    Veber's RuleNoChemAxon
    MDDR-like RuleNoChemAxon
    HMDB IDNot Available
    DrugBank IDNot Available
    Phenol Explorer Compound IDNot Available
    FoodDB IDNot Available
    KNApSAcK IDC00057829
    Chemspider ID295493
    KEGG Compound IDNot Available
    BioCyc IDNot Available
    BiGG IDNot Available
    Wikipedia LinkNot Available
    METLIN IDNot Available
    PubChem Compound333470
    PDB IDNot Available
    ChEBI IDNot Available
    Good Scents IDNot Available
    References
    General References
    1. Le Canh VC, Le Ba V, Thi Hai Yen P, Le Thi L, Thi Thuy Hoai P, Huu Dat TT, Thao DT, Bach LG, Kim YH, Tuan Anh HL: Identification Of Potential Cytotoxic Inhibitors From Physalis Minima. Nat Prod Res. 2021 Jun;35(12):2082-2085. doi: 10.1080/14786419.2019.1650360. Epub 2019 Aug 12. [PubMed:31402707 ]
    2. Kumar S, Bouic PJ, Rosenkranz B: Investigation of CYP2B6, 3A4 and beta-esterase interactions of Withania somnifera (L.) dunal in human liver microsomes and HepG2 cells. J Ethnopharmacol. 2021 Apr 24;270:113766. doi: 10.1016/j.jep.2020.113766. Epub 2021 Jan 1. [PubMed:33395575 ]
    3. Maher S, Choudhary MI, Saleem F, Rasheed S, Waheed I, Halim SA, Azeem M, Abdullah IB, Froeyen M, Mirza MU, Ahmad S: Isolation of Antidiabetic Withanolides from Withania coagulans Dunal and Their In Vitro and In Silico Validation. Biology (Basel). 2020 Jul 30;9(8). pii: biology9080197. doi: 10.3390/biology9080197. [PubMed:32751610 ]
    4. Chang LC, Sang-Ngern M, Pezzuto JM, Ma C: The Daniel K. Inouye College of Pharmacy Scripts: Poha Berry (Physalis peruviana) with Potential Anti-inflammatory and Cancer Prevention Activities. Hawaii J Med Public Health. 2016 Nov;75(11):353-359. [PubMed:27920947 ]
    5. Rao PC, Begum S, Jahromi MA, Jahromi ZH, Sriram S, Sahai M: Cytotoxicity of withasteroids: withametelin induces cell cycle arrest at G2/M phase and mitochondria-mediated apoptosis in non-small cell lung cancer A549 cells. Tumour Biol. 2016 Sep;37(9):12579-12587. doi: 10.1007/s13277-016-5128-5. Epub 2016 Jul 6. [PubMed:27382976 ]
    6. Gu M, Yu Y, Gunaherath GM, Gunatilaka AA, Li D, Sun D: Structure-activity relationship (SAR) of withanolides to inhibit Hsp90 for its activity in pancreatic cancer cells. Invest New Drugs. 2014 Feb;32(1):68-74. doi: 10.1007/s10637-013-9987-y. Epub 2013 Jul 26. [PubMed:23887853 ]
    7. Efferth T, Greten HJ: In Silico Analysis of Microarray-Based Gene Expression Profiles Predicts Tumor Cell Response to Withanolides. Microarrays (Basel). 2012 May 22;1(1):44-63. doi: 10.3390/microarrays1010044. [PubMed:27605335 ]
    8. Fang ST, Liu JK, Li B: A novel 1,10-seco withanolide from Physalis peruviana. J Asian Nat Prod Res. 2010 Jul;12(7):618-22. doi: 10.1080/10286020.2010.482523. [PubMed:20628942 ]
    9. Felix Frolow, Anil B. Ray, Mahendra Sahai, Erwin Glotter, Hugo E. Gottlieb and Isaac Kirson (1981). Felix Frolow, Anil B. Ray, Mahendra Sahai, Erwin Glotter, Hugo E. Gottlieb and Isaac Kirson. Withaperuvin and 4-deoxyphysalolactone, two new ergostane-type steroids from Physalis peruviana(Solanaceae). J. Chem. Soc., Perkin Trans. 1, 1981, 1029-1032 DOI: 10.1039/P19810001029. J. Chem. Soc., Perkin Trans..