NP-MRD: Showing NP-Card for Hexanorisocucurbitacin D (NP0044631)

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Record Information

Version

2.0

Created at

2022-02-24 21:09:49 UTC

Updated at

2026-02-13 08:02:02 UTC

NP-MRD ID

NP0044631

Natural Product DOI

https://doi.org/10.57994/6633

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Hexanorisocucurbitacin D

Description

Hexanorisocucurbitacin d belongs to the class of organic compounds known as 20-oxosteroids. These are steroid derivatives carrying a C=O group at the 20-position of the steroid skeleton. Thus, hexanorisocucurbitacin D is considered to be a sterol. Hexanorisocucurbitacin D was first documented in 2020 (PMID: 33269591). Based on a literature review very few articles have been published on Hexanorisocucurbitacin d.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652302242222092D          

 32 35  0  0  1  0            999 V2000
   -3.3110   -1.5369    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5008   -1.3814    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7301   -2.1739    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.5060   -2.4542    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0473   -2.6369    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3959   -2.1305    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.1983   -2.9315    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5838   -2.2757    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.8641   -1.4998    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3035   -3.0516    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5086   -3.1969    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0404   -2.5662    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7601   -1.7902    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.5723   -1.9354    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2920   -1.1595    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1041   -1.3047    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6359   -0.6740    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3844   -2.0807    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.1965   -2.2259    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8526   -2.7114    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4643   -3.2649    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7358   -3.5281    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0520   -1.6450    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.4798   -1.0143    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3323   -0.8691    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1995   -0.2384    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1444   -0.7239    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6762   -1.3546    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.0361   -0.6122    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0071   -0.7301    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8244   -0.8429    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6962    0.0341    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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  2  3  1  0  0  0  0
  3  4  1  1  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
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 12 20  1  0  0  0  0
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 13 23  1  0  0  0  0
  8 23  1  0  0  0  0
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 25 27  1  0  0  0  0
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  2 28  1  0  0  0  0
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 28 29  1  6  0  0  0
  2 30  1  6  0  0  0
 30 31  1  0  0  0  0
 30 32  2  0  0  0  0
M  END

     RDKit          3D

 63 66  0  0  0  0  0  0  0  0999 V2000
   -6.1097   -0.3376    1.4135 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6494   -0.1800    1.5586 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2020    0.1865    2.6293 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6864   -0.4481    0.4585 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.9382    0.3928   -0.7710 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.7576   -0.2541   -1.6974 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5840    0.7535   -1.3535 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.8850   -1.5272   -1.0716 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2222    0.3170   -0.5705 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4700    0.0624   -1.8624 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8584    0.5958   -1.8229 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6190    0.1161   -0.8093 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9051   -0.8463    0.0590 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.7716   -1.2382    1.1961 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1520   -1.4616    0.6834 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6801   -2.5424    0.6141 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8477   -0.2064    0.2507 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.1171   -0.4945   -0.2414 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0063    0.5813   -0.7126 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.6286    0.3178   -2.0975 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1430    2.0699   -0.5028 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5952   -0.2035    0.5623 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.0699    0.8340    1.5449 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2127   -1.2460    1.2563 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1800   -2.3868    1.4562 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5789   -0.9207    1.7495 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2809   -0.0063    0.8046 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.3972    1.3773    1.3121 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6082    0.5868    1.7851 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.9393   -2.2851   -0.2638 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1922   -1.8483   -1.8691 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2485    1.4411   -0.4542 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6210   -1.0365   -2.0834 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0905    0.4388   -2.7486 H   0  0  0  0  0  0  0  0  0  0  0  0
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    4.2379   -0.5969   -2.5486 H   0  0  0  0  0  0  0  0  0  0  0  0
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  1 30  1  0
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  1 32  1  0
M  END


  Mrv1652302242222092D          

 32 35  0  0  1  0            999 V2000
   -3.3110   -1.5369    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5008   -1.3814    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7301   -2.1739    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.5060   -2.4542    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0473   -2.6369    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3959   -2.1305    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.1983   -2.9315    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5838   -2.2757    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.8641   -1.4998    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3035   -3.0516    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5086   -3.1969    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0404   -2.5662    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7601   -1.7902    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.5723   -1.9354    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2920   -1.1595    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1041   -1.3047    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6359   -0.6740    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3844   -2.0807    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.1965   -2.2259    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8526   -2.7114    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4643   -3.2649    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7358   -3.5281    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0520   -1.6450    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.4798   -1.0143    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3323   -0.8691    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1995   -0.2384    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1444   -0.7239    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6762   -1.3546    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.0361   -0.6122    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0071   -0.7301    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8244   -0.8429    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6962    0.0341    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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  2  3  1  0  0  0  0
  3  4  1  1  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  1  0  0  0
  6  8  1  0  0  0  0
  8  9  1  6  0  0  0
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 13 23  1  0  0  0  0
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  2 30  1  6  0  0  0
 30 31  1  0  0  0  0
 30 32  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0044631

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H][C@@]1([C@H](O)C[C@@]2(C)[C@]3([H])CC=C4[C@@]([H])(CC(=O)[C@@H](O)C4(C)C)[C@]3(C)C(=O)C[C@]12C)C(C)=O

> <INCHI_IDENTIFIER>
InChI=1S/C24H34O5/c1-12(25)19-16(27)10-22(4)17-8-7-13-14(9-15(26)20(29)21(13,2)3)24(17,6)18(28)11-23(19,22)5/h7,14,16-17,19-20,27,29H,8-11H2,1-6H3/t14-,16-,17+,19+,20-,22+,23-,24+/m1/s1

> <INCHI_KEY>
RKYRHTLYIGVTOJ-NITOUSFVSA-N

> <FORMULA>
C24H34O5

> <MOLECULAR_WEIGHT>
402.531

> <EXACT_MASS>
402.240624195

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
63

> <JCHEM_AVERAGE_POLARIZABILITY>
43.98052739454232

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,2R,5S,10S,11S,13R,14R,15R)-14-acetyl-5,13-dihydroxy-1,6,6,11,15-pentamethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-7-ene-4,17-dione

> <ALOGPS_LOGP>
3.00

> <JCHEM_LOGP>
2.062719701666667

> <ALOGPS_LOGS>
-3.71

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.746820531720555

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.91293692775108

> <JCHEM_PKA_STRONGEST_BASIC>
-2.912147728031819

> <JCHEM_POLAR_SURFACE_AREA>
91.66999999999999

> <JCHEM_REFRACTIVITY>
109.7743

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
7.85e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2R,5S,10S,11S,13R,14R,15R)-14-acetyl-5,13-dihydroxy-1,6,6,11,15-pentamethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-7-ene-4,17-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 24-FEB-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-FEB-22         0                                  
HETATM    1  H   UNK     0      -6.181  -2.869   0.000  0.00  0.00           H+0
HETATM    2  C   UNK     0      -4.668  -2.579   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -5.096  -4.058   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      -6.545  -4.581   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0      -3.822  -4.922   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -2.606  -3.977   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -2.237  -5.472   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.090  -4.248   0.000  0.00  0.00           C+0
HETATM    9  H   UNK     0      -1.613  -2.800   0.000  0.00  0.00           H+0
HETATM   10  C   UNK     0      -0.567  -5.696   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.949  -5.967   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       1.942  -4.790   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       1.419  -3.342   0.000  0.00  0.00           C+0
HETATM   14  H   UNK     0       2.935  -3.613   0.000  0.00  0.00           H+0
HETATM   15  C   UNK     0       2.412  -2.164   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       3.928  -2.436   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       4.920  -1.258   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       4.451  -3.884   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       5.967  -4.155   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       3.458  -5.061   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       4.600  -6.094   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       3.240  -6.586   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -0.097  -3.071   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       0.896  -1.893   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      -0.620  -1.622   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       0.372  -0.445   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0      -2.136  -1.351   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      -3.129  -2.529   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      -3.801  -1.143   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      -5.613  -1.363   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      -7.139  -1.573   0.000  0.00  0.00           C+0
HETATM   32  O   UNK     0      -5.033   0.064   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3   28   30                                             
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6                                                       
CONECT    6    5    7    8   28                                             
CONECT    7    6                                                            
CONECT    8    6    9   10   23                                             
CONECT    9    8                                                            
CONECT   10    8   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13   20                                                  
CONECT   13   12   14   15   23                                             
CONECT   14   13                                                            
CONECT   15   13   16                                                       
CONECT   16   15   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   12   21   22                                             
CONECT   21   20                                                            
CONECT   22   20                                                            
CONECT   23   13    8   24   25                                             
CONECT   24   23                                                            
CONECT   25   23   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28                                                       
CONECT   28   27    2    6   29                                             
CONECT   29   28                                                            
CONECT   30    2   31   32                                                  
CONECT   31   30                                                            
CONECT   32   30                                                            
MASTER        0    0    0    0    0    0    0    0   32    0   70    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₄H₃₄O₅

Average Mass

402.5310 Da

Monoisotopic Mass

402.24062 Da

IUPAC Name

(1R,2R,5S,10S,11S,13R,14R,15R)-14-acetyl-5,13-dihydroxy-1,6,6,11,15-pentamethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-7-ene-4,17-dione

Traditional Name

(1R,2R,5S,10S,11S,13R,14R,15R)-14-acetyl-5,13-dihydroxy-1,6,6,11,15-pentamethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-7-ene-4,17-dione

CAS Registry Number

Not Available

SMILES

[H][C@@]1([C@H](O)C[C@@]2(C)[C@]3([H])CC=C4[C@@]([H])(CC(=O)[C@@H](O)C4(C)C)[C@]3(C)C(=O)C[C@]12C)C(C)=O

InChI Identifier

InChI=1S/C24H34O5/c1-12(25)19-16(27)10-22(4)17-8-7-13-14(9-15(26)20(29)21(13,2)3)24(17,6)18(28)11-23(19,22)5/h7,14,16-17,19-20,27,29H,8-11H2,1-6H3/t14-,16-,17+,19+,20-,22+,23-,24+/m1/s1

InChI Key

RKYRHTLYIGVTOJ-NITOUSFVSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 125 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 150 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 175 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 225 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 250 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹H NMR Spectrum (1D, 400.0, Methanol-d4, simulated)	[email protected]	Not Available	Not Available	2026-02-13	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 125.0, Methanol-d4, simulated)	[email protected]	Not Available	Not Available	2026-02-13	View Spectrum

Species

Species of Origin

Species Name	Source	Reference
Trichosanthes cucumeroides		Not Available
Trichosanthes cucumeroides	Linington's dataset npmrd_submissions_20220207	33269591

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as 20-oxosteroids. These are steroid derivatives carrying a C=O group at the 20-position of the steroid skeleton.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Steroids and steroid derivatives

Sub Class

Oxosteroids

Direct Parent

20-oxosteroids

Alternative Parents

Substituents

20-oxosteroid
14-alpha-methylsteroid
3-alpha-hydroxysteroid
16-hydroxysteroid
16-alpha-hydroxysteroid
11-oxosteroid
Hydroxysteroid
3-hydroxysteroid
3-hydroxy-delta-5-steroid
Delta-5-steroid
Cyclic alcohol
Cyclic ketone
Secondary alcohol
Ketone
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Alcohol
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3	ALOGPS
logP	2.06	ChemAxon
logS	-3.7	ALOGPS
pKa (Strongest Acidic)	12.91	ChemAxon
pKa (Strongest Basic)	-2.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	91.67 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	109.77 m³·mol⁻¹	ChemAxon
Polarizability	43.98 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

113385107

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Zhang X, Li H, Wang W, Chen T, Xuan L: Lipid-Lowering Activities of Cucurbitacins Isolated from Trichosanthes cucumeroides and Their Synthetic Derivatives. J Nat Prod. 2020 Dec 24;83(12):3536-3544. doi: 10.1021/acs.jnatprod.0c00364. Epub 2020 Dec 3. [PubMed:33269591 ]
DOI: 10.1021/acs.jnatprod.0c00364
PMID: 33269591

Showing NP-Card for Hexanorisocucurbitacin D (NP0044631)

MOL for NP0044631 (Hexanorisocucurbitacin D)

3D MOL for NP0044631 (Hexanorisocucurbitacin D)

3D SDF for NP0044631 (Hexanorisocucurbitacin D)

3D-SDF for NP0044631 (Hexanorisocucurbitacin D)

PDB for NP0044631 (Hexanorisocucurbitacin D)

3D PDB for NP0044631 (Hexanorisocucurbitacin D)

SMILES for NP0044631 (Hexanorisocucurbitacin D)

INCHI for NP0044631 (Hexanorisocucurbitacin D)

Structure for NP0044631 (Hexanorisocucurbitacin D)

3D Structure for NP0044631 (Hexanorisocucurbitacin D)