Showing NP-Card for (S)-2-Aceto-2-hydroxybutanoic acid (NP0044404)

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Record Information
Version2.0
Created at2022-02-14 20:56:09 UTC
Updated at2022-03-10 22:16:35 UTC
NP-MRD IDNP0044404
Secondary Accession NumbersNone
Natural Product Identification
Common Name(S)-2-Aceto-2-hydroxybutanoic acid
Description(S)-2-Aceto-2-hydroxybutanoic acid, also known as (S)-2-hydroxy-2-ethyl-3-oxobutanoate or (S)-2-acetyl-2-hydroxybutyrate, belongs to the class of organic compounds known as short-chain keto acids and derivatives. These are keto acids with an alkyl chain the contains less than 6 carbon atoms. A 3-oxo monocarboxylic acid that is butanoic acid in which the hydrogens at position 2 are replaced by an acetyl and a hydroxy group (the S enantiomer) (S)-2-Aceto-2-hydroxybutanoic acid is a very hydrophobic molecule, practically insoluble (in water), and relatively neutral (S)-2-Aceto-2-hydroxybutanoic acid exists in all living species, ranging from bacteria to humans. (S)-2-Aceto-2-hydroxybutanoic acid is expected to be in Cannabis as all living plants are known to produce and metabolize it.
Structure
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MOL3D MOLSDFPDBSMILESInChI

MOL for NP0044404 ((S)-2-Aceto-2-hydroxybutanoic acid)

  Mrv1652306222023452D          

 10  9  0  0  1  0            999 V2000
    2.2539    1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7770   -0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2539    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9520   -0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5395    0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.5395   -1.0164    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250   -0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1105    0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1270    1.1270    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  3  1  1  0  0  0  0
  4  2  1  0  0  0  0
  6  3  1  6  0  0  0
  6  4  1  0  0  0  0
  6  5  1  0  0  0  0
  7  4  2  0  0  0  0
  8  5  2  0  0  0  0
  9  5  1  0  0  0  0
  6 10  1  1  0  0  0
M  END
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3D MOL for NP0044404 ((S)-2-Aceto-2-hydroxybutanoic acid)

     RDKit          3D

 20 19  0  0  0  0  0  0  0  0999 V2000
   -1.6424   -1.2710    0.2475 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9020   -0.0947    0.8917 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0754    0.5242   -0.2429 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.9886    0.9191   -1.2107 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8012   -0.5239   -0.7618 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8928   -1.1774    0.0028 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6488   -0.9140   -1.9107 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6479    1.7147    0.2553 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5309    1.6465    1.1353 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3593    2.9883   -0.2558 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7999   -1.0975   -0.8351 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6503   -1.4091    0.7059 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0593   -2.1749    0.4673 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2659   -0.4353    1.7204 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6386    0.6115    1.2812 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4313    1.7463   -0.8672 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4704   -2.1125    0.4323 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7217   -1.4482   -0.6797 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2552   -0.5566    0.8434 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1253    3.0646   -1.2192 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  6
  3  5  1  0
  5  6  1  0
  5  7  2  0
  3  8  1  0
  8 10  1  0
  8  9  2  0
  1 11  1  0
  1 12  1  0
  1 13  1  0
  2 14  1  0
  2 15  1  0
  4 16  1  0
  6 17  1  0
  6 18  1  0
  6 19  1  0
 10 20  1  0
M  END
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3D SDF for NP0044404 ((S)-2-Aceto-2-hydroxybutanoic acid)

  Mrv1652306222023452D          

 10  9  0  0  1  0            999 V2000
    2.2539    1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7770   -0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2539    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9520   -0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5395    0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.5395   -1.0164    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250   -0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1105    0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1270    1.1270    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  3  1  1  0  0  0  0
  4  2  1  0  0  0  0
  6  3  1  6  0  0  0
  6  4  1  0  0  0  0
  6  5  1  0  0  0  0
  7  4  2  0  0  0  0
  8  5  2  0  0  0  0
  9  5  1  0  0  0  0
  6 10  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0044404

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC[C@](O)(C(C)=O)C(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C6H10O4/c1-3-6(10,4(2)7)5(8)9/h10H,3H2,1-2H3,(H,8,9)/t6-/m0/s1

> <INCHI_KEY>
VUQLHQFKACOHNZ-LURJTMIESA-N

> <FORMULA>
C6H10O4

> <MOLECULAR_WEIGHT>
146.1412

> <EXACT_MASS>
146.057908808

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
20

> <JCHEM_AVERAGE_POLARIZABILITY>
13.72478643988865

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2S)-2-ethyl-2-hydroxy-3-oxobutanoic acid

> <ALOGPS_LOGP>
-0.58

> <JCHEM_LOGP>
0.23863807466666656

> <ALOGPS_LOGS>
0.25

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
12.228646628694571

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.602709116384785

> <JCHEM_PKA_STRONGEST_BASIC>
-4.6693092913361545

> <JCHEM_POLAR_SURFACE_AREA>
74.6

> <JCHEM_REFRACTIVITY>
33.114399999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.59e+02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2S)-2-ethyl-2-hydroxy-3-oxobutanoic acid

> <JCHEM_VEBER_RULE>
0

$$$$
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3D-SDF for NP0044404 ((S)-2-Aceto-2-hydroxybutanoic acid)

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PDB for NP0044404 ((S)-2-Aceto-2-hydroxybutanoic acid)
HEADER    PROTEIN                                 22-JUN-20   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   22-JUN-20         0                                  
HETATM    1  C   UNK     0       4.207   3.080   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       5.184  -0.564   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       4.207   1.540   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       3.644  -0.564   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.540   0.000   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.874   0.770   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0       2.874  -1.897   0.000  0.00  0.00           O+0
HETATM    8  O   UNK     0       1.540  -1.540   0.000  0.00  0.00           O+0
HETATM    9  O   UNK     0       0.206   0.770   0.000  0.00  0.00           O+0
HETATM   10  O   UNK     0       2.104   2.104   0.000  0.00  0.00           O+0
CONECT    1    3                                                            
CONECT    2    4                                                            
CONECT    3    1    6                                                       
CONECT    4    2    6    7                                                  
CONECT    5    6    8    9                                                  
CONECT    6    3    4    5   10                                             
CONECT    7    4                                                            
CONECT    8    5                                                            
CONECT    9    5                                                            
CONECT   10    6                                                            
MASTER        0    0    0    0    0    0    0    0   10    0   18    0
END

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3D PDB for NP0044404 ((S)-2-Aceto-2-hydroxybutanoic acid)
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SMILES for NP0044404 ((S)-2-Aceto-2-hydroxybutanoic acid)
CC[C@](O)(C(C)=O)C(O)=O
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INCHI for NP0044404 ((S)-2-Aceto-2-hydroxybutanoic acid)
InChI=1S/C6H10O4/c1-3-6(10,4(2)7)5(8)9/h10H,3H2,1-2H3,(H,8,9)/t6-/m0/s1
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View in JSmol
Synonyms
ValueSource
(S)-2-Acetyl-2-hydroxybutyric acidChEBI
(S)-2-Hydroxy-2-ethyl-3-oxobutanoateKegg
(S)-2-Acetyl-2-hydroxybutyrateGenerator
(S)-2-Hydroxy-2-ethyl-3-oxobutanoic acidGenerator
(S)-2-Aceto-2-hydroxybutanoateGenerator
(2S)-2-Ethyl-2-hydroxy-3-oxobutanoateHMDB
(2S)-2-Ethyl-2-hydroxy-3-oxobutanoic acidHMDB
2S-Acetyl-2-hydroxy-butanoateHMDB
(S)-2-Aceto-2-hydroxy-butyrateHMDB
2-Aceto-2-hydroxybutyric acidHMDB
2-Ethyl-2-hydroxy-3-oxobutanoic acidHMDB
Acetohydroxybutyric acidHMDB
alpha-Aceto-alpha-hydroxybutyric acidHMDB
alpha-Acetohydroxybutyric acidHMDB
α-Aceto-α-hydroxybutyric acidHMDB
α-Acetohydroxybutyric acidHMDB
Chemical FormulaC6H10O4
Average Mass146.1412 Da
Monoisotopic Mass146.05791 Da
IUPAC Name(2S)-2-ethyl-2-hydroxy-3-oxobutanoic acid
Traditional Name(2S)-2-ethyl-2-hydroxy-3-oxobutanoic acid
CAS Registry Number113919-07-6
SMILES
CC[C@](O)(C(C)=O)C(O)=O
InChI Identifier
InChI=1S/C6H10O4/c1-3-6(10,4(2)7)5(8)9/h10H,3H2,1-2H3,(H,8,9)/t6-/m0/s1
InChI KeyVUQLHQFKACOHNZ-LURJTMIESA-N
Experimental Spectra
Not Available
Predicted Spectra
Chemical Shift Submissions
Not Available
Species
Species of Origin
Chemical Taxonomy
Description Belongs to the class of organic compounds known as short-chain keto acids and derivatives. These are keto acids with an alkyl chain the contains less than 6 carbon atoms.
KingdomOrganic compounds  
Super ClassOrganic acids and derivatives  
ClassKeto acids and derivatives  
Sub ClassShort-chain keto acids and derivatives  
Direct ParentShort-chain keto acids and derivatives  
Alternative Parents
Substituents
  • Beta-keto acid
    • 

  • Branched fatty acid
    • 

  • Hydroxy fatty acid
    • 

  • Short-chain keto acid
    • 

  • Alpha-hydroxy acid
    • 

  • Fatty acyl
    • 

  • Acyloin
    • 

  • Beta-hydroxy ketone
    • 

  • Hydroxy acid
    • 

  • Tertiary alcohol
    • 

  • Alpha-hydroxy ketone
    • 

  • Ketone
    • 

  • Carboxylic acid derivative
    • 

  • Monocarboxylic acid or derivatives
    • 

  • Carboxylic acid
    • 

  • Carbonyl group
    • 

  • Alcohol
    • 

  • Organic oxygen compound
    • 

  • Organooxygen compound
    • 

  • Hydrocarbon derivative
    • 

  • Organic oxide
    • 

  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-0.58ALOGPS
logP0.24ChemAxon
logS0.25ALOGPS
pKa (Strongest Acidic)3.6ChemAxon
pKa (Strongest Basic)-4.7ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area74.6 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity33.11 m³·mol⁻¹ChemAxon
Polarizability13.72 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDHMDB0006900  
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDFDB024147  
KNApSAcK IDNot Available
Chemspider ID389708  
KEGG Compound IDC06006  
BioCyc ID2-ACETO-2-HYDROXY-BUTYRATE  
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound440875  
PDB IDNot Available
ChEBI ID27681  
Good Scents IDNot Available
References
General ReferencesNot Available