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Record Information
Version2.0
Created at2022-02-14 20:44:10 UTC
Updated at2022-03-10 22:17:53 UTC
NP-MRD IDNP0044280
Secondary Accession NumbersNone
Natural Product Identification
Common Nameall-trans-Phytofluene
DescriptionAll-trans-Phytofluene, also known as phytofluene, belongs to the class of organic compounds known as carotenes. These are a type of unsaturated hydrocarbons containing eight consecutive isoprene units. They are characterized by the presence of two end-groups (mostly cyclohexene rings, but also cyclopentene rings or acyclic groups) linked by a long branched alkyl chain. Carotenes belonging form a subgroup of the carotenoids family. Thus, all-trans-phytofluene is considered to be an isoprenoid lipid molecule. All-trans-Phytofluene is a very hydrophobic molecule, practically insoluble (in water), and relatively neutral. All-trans-Phytofluene is expected to be in Cannabis as all living plants are known to produce and metabolize it.
Structure
Thumb
Synonyms
ValueSource
(12E,16E,18E,22E,26E)-2,6,10,14,19,23,27,31-Octamethyldotriaconta-2,6,10,12,14,16,18,22,26,30-decaeneChEBI
7,7',8,8',11,12-Hexahydro-psi,psi-caroteneChEBI
PhytoflueneChEBI
7,8,11,12,7',8'-Hexahydro-psi,psi-caroteneHMDB
Phytofluene, (cis)-isomerHMDB
7,7',8,8',11,12-Hexahydro-ψ,ψ-caroteneHMDB
7,7',8,8',11,12-HexahydrolycopeneHMDB
7,7’,8,8’,11,12-hexahydro-ψ,ψ-caroteneHMDB
7,7’,8,8’,11,12-hexahydrolycopeneHMDB
all-(e)-PhytoflueneHMDB
all-trans-PhytoflueneHMDB
Chemical FormulaC40H62
Average Mass542.9203 Da
Monoisotopic Mass542.48515 Da
IUPAC Name(6E,10E,12E,14E,16E,18E,22E,26E)-2,6,10,14,19,23,27,31-octamethyldotriaconta-2,6,10,12,14,16,18,22,26,30-decaene
Traditional Name(cis)-phytofluene
CAS Registry Number540-05-6
SMILES
CC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C\C=C\C=C(/C)\C=C\C=C(/C)CC\C=C(/C)CCC=C(C)C
InChI Identifier
InChI=1S/C40H62/c1-33(2)19-13-23-37(7)27-17-31-39(9)29-15-25-35(5)21-11-12-22-36(6)26-16-30-40(10)32-18-28-38(8)24-14-20-34(3)4/h11-12,15,19-22,25,27-30H,13-14,16-18,23-24,26,31-32H2,1-10H3/b12-11+,25-15+,35-21+,36-22+,37-27+,38-28+,39-29+,40-30+
InChI KeyOVSVTCFNLSGAMM-OUOOUFEBSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
African marigoldPlant
Aureococcus anaphagefferensChromista
Averrhoa carambolaPlant
Calendula officinalisLOTUS Database
Cannabis sativaCannabisDB
      Not Available
Capsicum annuum L.Plant
Carica papaya L.Plant
Celastrus orbiculatusLOTUS Database
Chlorella vulgarisLOTUS Database
Citrullus vulgarisPlant
Citrus medicaPlant
Citrus paradisiLOTUS Database
Citrus reticulataPlant
Citrus sinensisLOTUS Database
Crocus sativusPlant
Dacrymyces stillatus-
Daucus carota var.sativaPlant
Diospyros kakiLOTUS Database
Erwinia herbicola strain Eho10Bacteria
Erwinia herbicola strain Eho13Bacteria
Flavobacterium sp. Strain R1534Bacteria
Hibiscus syriacusLOTUS Database
Homo sapiensLOTUS Database
Medicago carstiensisPlant
Medicago cretaceaPlant
Medicago daghestanicaPlant
Medicago glomerataPlant
Medicago hybridaPlant
Medicago pironaePlant
Medicago prostrataPlant
Medicago rupestrisPlant
Medicago ruthenicaPlant
Medicago sativaPlant
Medicago saxatilisPlant
Medicago suffruticosaPlant
Myxococcus xanthusBacteria
Olea europaeaLOTUS Database
Pantoea ananatisBacteria
Passiflora edulisPlant
Phaeodactylum tricornutumChromalveolata
Psidium guajavaPlant
Rhaphiolepis bibasPlant
Rhodobacter capsulatus--
Rhodobacter sphaeroides--
Rhodomicrobium vannieliiLOTUS Database
Rhodospirillum rubrumLOTUS Database
Rhodotorula glutinisLOTUS Database
Rosa villosaLOTUS Database
Sorbus aucupariaLOTUS Database
Streptomyces griseusBacteria
Synechococcus sp. strain PCC7942Bacteria
Synechocystis sp. strain PC6803-
Thalassiosiria pseudonana-
Turnera ulmifoliaPlant
Viola tricolorPlant
Vitis viniferaLOTUS Database
Zea maysLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as carotenes. These are a type of unsaturated hydrocarbons containing eight consecutive isoprene units. They are characterized by the presence of two end-groups (mostly cyclohexene rings, but also cyclopentene rings or acyclic groups) linked by a long branched alkyl chain. Carotenes belonging form a subgroup of the carotenoids family.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTetraterpenoids
Direct ParentCarotenes
Alternative Parents
Substituents
  • Carotene
  • Branched unsaturated hydrocarbon
  • Unsaturated aliphatic hydrocarbon
  • Unsaturated hydrocarbon
  • Olefin
  • Acyclic olefin
  • Hydrocarbon
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP9.56ALOGPS
logP13.02ChemAxon
logS-6.2ALOGPS
Physiological Charge0ChemAxon
Hydrogen Acceptor Count0ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area0 ŲChemAxon
Rotatable Bond Count19ChemAxon
Refractivity194.46 m³·mol⁻¹ChemAxon
Polarizability74.89 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDHMDB0002272
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDFDB022937
KNApSAcK IDC00000913
Chemspider ID4941340
KEGG Compound IDC05414
BioCyc IDCPD-7408
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound6436722
PDB IDNot Available
ChEBI ID28129
Good Scents IDNot Available
References
General References
  1. Khachik F, Beecher GR, Goli MB, Lusby WR, Smith JC Jr: Separation and identification of carotenoids and their oxidation products in the extracts of human plasma. Anal Chem. 1992 Sep 15;64(18):2111-22. doi: 10.1021/ac00042a016. [PubMed:1416048 ]
  2. Hugueney P, Romer S, Kuntz M, Camara B: Characterization and molecular cloning of a flavoprotein catalyzing the synthesis of phytofluene and zeta-carotene in Capsicum chromoplasts. Eur J Biochem. 1992 Oct 1;209(1):399-407. doi: 10.1111/j.1432-1033.1992.tb17302.x. [PubMed:1396714 ]
  3. Hsu BY, Pu YS, Inbaraj BS, Chen BH: An improved high performance liquid chromatography-diode array detection-mass spectrometry method for determination of carotenoids and their precursors phytoene and phytofluene in human serum. J Chromatogr B Analyt Technol Biomed Life Sci. 2012 Jun 15;899:36-45. doi: 10.1016/j.jchromb.2012.04.034. Epub 2012 May 5. [PubMed:22622065 ]
  4. Melendez-Martinez AJ, Stinco CM, Liu C, Wang XD: A simple HPLC method for the comprehensive analysis of cis/trans (Z/E) geometrical isomers of carotenoids for nutritional studies. Food Chem. 2013 Jun 1;138(2-3):1341-50. doi: 10.1016/j.foodchem.2012.10.067. Epub 2012 Nov 15. [PubMed:23411252 ]