Np mrd loader

Record Information
Version1.0
Created at2021-06-22 17:27:24 UTC
Updated at2021-06-22 17:27:24 UTC
NP-MRD IDNP0043883
Secondary Accession NumbersNone
Natural Product Identification
Common NameGeleganimine A
Description Geleganimine A is found in Gelsemium elegans. It was first documented in 2013 (PMID: 24256496).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC39H44N4O8
Average Mass696.8010 Da
Monoisotopic Mass696.31591 Da
IUPAC Name(1'R,2'S,3S,5'S,8'R,11'S)-2'-[(2R,4S)-4-hydroxy-4-[(1'R,3S,7'R,8'S)-1-methoxy-2-oxo-1,2-dihydro-10'-oxa-5'-azaspiro[indole-3,2'-tricyclo[5.3.1.0^{4,8}]undecan]-5'-en-6'-yl]pentan-2-yl]-1-methoxy-1,2-dihydro-3',9'-dioxa-4'-azaspiro[indole-3,7'-tetracyclo[6.3.1.0^{2,4}.0^{5,11}]dodecane]-2-one
Traditional Name(1'R,2'S,3S,5'S,8'R,11'S)-2'-[(2R,4S)-4-hydroxy-4-[(1'R,3S,7'R,8'S)-1-methoxy-2-oxo-10'-oxa-5'-azaspiro[indole-3,2'-tricyclo[5.3.1.0^{4,8}]undecan]-5'-en-6'-yl]pentan-2-yl]-1-methoxy-3',9'-dioxa-4'-azaspiro[indole-3,7'-tetracyclo[6.3.1.0^{2,4}.0^{5,11}]dodecane]-2-one
CAS Registry NumberNot Available
SMILES
[H][C@]12CO[C@]3([H])C[C@@]1([H])C(=NC2C[C@@]31C(=O)N(OC)C2=CC=CC=C12)[C@@](C)(O)C[C@@H](C)[C@@]12ON1[C@@]1([H])C[C@@]3(C(=O)N(OC)C4=C3C=CC=C4)[C@@]3([H])C[C@]2([H])[C@]1([H])CO3
InChI Identifier
InChI=1S/C39H44N4O8/c1-20(39-26-14-32-38(17-30(43(39)51-39)23(26)19-50-32)25-10-6-8-12-29(25)42(48-4)35(38)45)15-36(2,46)33-21-13-31-37(16-27(40-33)22(21)18-49-31)24-9-5-7-11-28(24)41(47-3)34(37)44/h5-12,20-23,26-27,30-32,46H,13-19H2,1-4H3/t20-,21-,22+,23+,26-,27?,30+,31-,32-,36+,37+,38+,39+,43?/m1/s1
InChI KeyQNSZKXIWPRPXNZ-VPILIZHNSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 125 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 150 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 250 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 175 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 225 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 25 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, Pydridine-d5, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Gelsemium elegansLinigton's dataset
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.04ALOGPS
logP2.86ChemAxon
logS-4.3ALOGPS
pKa (Strongest Acidic)13.89ChemAxon
pKa (Strongest Basic)4.96ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count10ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area125.67 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity181.87 m³·mol⁻¹ChemAxon
Polarizability73.61 ųChemAxon
Number of Rings11ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
External LinksNot Available
References
General References
  1. Qu J, Fang L, Ren XD, Liu Y, Yu SS, Li L, Bao XQ, Zhang D, Li Y, Ma SG: Bisindole alkaloids with neural anti-inflammatory activity from Gelsemium elegans. J Nat Prod. 2013 Dec 27;76(12):2203-9. doi: 10.1021/np4005536. Epub 2013 Nov 20. [PubMed:24256496 ]