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Record Information
Version2.0
Created at2021-06-22 17:27:07 UTC
Updated at2021-08-20 00:00:47 UTC
NP-MRD IDNP0043877
Secondary Accession NumbersNone
Natural Product Identification
Common NameFraxin
DescriptionFraxin belongs to the class of organic compounds known as coumarin glycosides. These are aromatic compounds containing a carbohydrate moiety glycosidically bound to a coumarin moiety. Fraxin is a secondary metabolite. Secondary metabolites are metabolically or physiologically non-essential metabolites that may serve a role as defense or signalling molecules. In some cases they are simply molecules that arise from the incomplete metabolism of other secondary metabolites. Fraxin is found in Actinidia chinensis, Aesculus turbinata, Apis cerana, Tetradium glabrifolium, Fraxinus angustifolia, Fraxinus chinensis, Fraxinus floribunda, Fraxinus mandshurica, Fraxinus micrantha, Fraxinus pallisae, Lupinus angustifolius, Prunus prostrata, Rhododendron groenlandicum, Sarcandra glabra and Weigela subsessilis. Fraxin was first documented in 1992 (PMID: 1298368). Based on a literature review a small amount of articles have been published on fraxin (PMID: 26945887) (PMID: 28383514) (PMID: 28922728) (PMID: 30348388).
Structure
Thumb
Synonyms
ValueSource
8-(beta-D-Glucopyranosyloxy)-7-hydroxy-6-methoxy-2H-1-benzopyran-2-oneChEBI
Fraxetin-8-beta-D-glucopyranosideChEBI
Fraxetin-8-O-beta-D-glucopyranosideChEBI
Fraxetin-8-O-beta-D-glucosideChEBI
Fraxetin-8-O-glucosideChEBI
8-(b-D-Glucopyranosyloxy)-7-hydroxy-6-methoxy-2H-1-benzopyran-2-oneGenerator
8-(Β-D-glucopyranosyloxy)-7-hydroxy-6-methoxy-2H-1-benzopyran-2-oneGenerator
Fraxetin-8-b-D-glucopyranosideGenerator
Fraxetin-8-β-D-glucopyranosideGenerator
Fraxetin-8-O-b-D-glucopyranosideGenerator
Fraxetin-8-O-β-D-glucopyranosideGenerator
Fraxetin-8-O-b-D-glucosideGenerator
Fraxetin-8-O-β-D-glucosideGenerator
7,8-Dihydroxy-6-methoxycoumarin-8-beta-D-glucosideMeSH
Chemical FormulaC16H18O10
Average Mass370.3100 Da
Monoisotopic Mass370.09000 Da
IUPAC Name7-hydroxy-6-methoxy-8-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-2H-chromen-2-one
Traditional Name7-hydroxy-6-methoxy-8-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-2-one
CAS Registry NumberNot Available
SMILES
COC1=C(O)C(O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)=C2OC(=O)C=CC2=C1
InChI Identifier
InChI=1S/C16H18O10/c1-23-7-4-6-2-3-9(18)25-14(6)15(11(7)20)26-16-13(22)12(21)10(19)8(5-17)24-16/h2-4,8,10,12-13,16-17,19-22H,5H2,1H3/t8-,10-,12+,13-,16+/m1/s1
InChI KeyCRSFLLTWRCYNNX-QBNNUVSCSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR1H NMR Spectrum (1D, 600 MHz, Methanol-d4, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, Methanol-d4, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, Methanol-d4, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, Methanol-d4, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, Methanol-d4, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, Methanol-d4, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, Methanol-d4, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, Methanol-d4, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, Methanol-d4, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, Methanol-d4, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Acer nikoenseKNApSAcK Database
Actinidia chinensisLOTUS Database
Aesculus hippocastanumKNApSAcK Database
Aesculus turbinataLOTUS Database
Apis ceranaLOTUS Database
Campanula spp.KNApSAcK Database
Chimonanthus fragransKNApSAcK Database
Diervilla spp.KNApSAcK Database
Euodia fargesiiLOTUS Database
Fraxinus angustifoliaLOTUS Database
Fraxinus bungeanaKNApSAcK Database
Fraxinus chinensisLOTUS Database
Fraxinus excelsiorKNApSAcK Database
Fraxinus floribundaLOTUS Database
Fraxinus japonica Seringe BlumeKNApSAcK Database
Fraxinus mandshuricaLOTUS Database
Fraxinus micranthaLOTUS Database
Fraxinus ornusKNApSAcK Database
Fraxinus pallisaeLOTUS Database
Fraxinus paxianaKNApSAcK Database
Fraxinus potamophilaKNApSAcK Database
Fraxinus spp.KNApSAcK Database
Fraxinus stylosaKNApSAcK Database
Fraxinus szaboanaKNApSAcK Database
Lupinus angustifoliusLOTUS Database
Pileostegia viburnoides var. glabrescensKNApSAcK Database
Prunus prostrataLOTUS Database
Rhododendron groenlandicumLOTUS Database
Sarcandra glabraLOTUS Database
Symphoricarpos spp.KNApSAcK Database
Tilia spp.KNApSAcK Database
Weigela subsessilisLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as coumarin glycosides. These are aromatic compounds containing a carbohydrate moiety glycosidically bound to a coumarin moiety.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassCoumarins and derivatives
Sub ClassCoumarin glycosides
Direct ParentCoumarin glycosides
Alternative Parents
Substituents
  • Coumarin o-glycoside
  • Coumarin-8-o-glycoside
  • Phenolic glycoside
  • 7-hydroxycoumarin
  • Hexose monosaccharide
  • Hydroxycoumarin
  • Glycosyl compound
  • O-glycosyl compound
  • Benzopyran
  • 1-benzopyran
  • Anisole
  • Alkyl aryl ether
  • Pyranone
  • Benzenoid
  • Pyran
  • Monosaccharide
  • Oxane
  • Heteroaromatic compound
  • Lactone
  • Secondary alcohol
  • Acetal
  • Ether
  • Organoheterocyclic compound
  • Oxacycle
  • Polyol
  • Alcohol
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Primary alcohol
  • Organooxygen compound
  • Organic oxide
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling Point722.20 °C. @ 760.00 mm Hg (est)The Good Scents Company Information System
Water Solubility191200 mg/L @ 25 °C (est)The Good Scents Company Information System
LogP-1.930 (est)The Good Scents Company Information System
Predicted Properties
PropertyValueSource
logP-0.66ALOGPS
logP-1.2ChemAxon
logS-1.6ALOGPS
pKa (Strongest Acidic)7.62ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count9ChemAxon
Hydrogen Donor Count5ChemAxon
Polar Surface Area155.14 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity84.12 m³·mol⁻¹ChemAxon
Polarizability33.99 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00002474
Chemspider ID4437971
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkFraxin
METLIN IDNot Available
PubChem Compound5273568
PDB IDNot Available
ChEBI ID5170
Good Scents IDrw1700691
References
General References
  1. Poukens-Renwart P, Tits M, Wauters JN, Angenot L: Reversed-phase HPTLC densitometric evaluation of fraxin in Fraxinus excelsior leaves. J Pharm Biomed Anal. 1992 Oct-Dec;10(10-12):1089-91. doi: 10.1016/0731-7085(91)80126-t. [PubMed:1298368 ]
  2. Wang H, Xiao B, Hao Z, Sun Z: Simultaneous determination of fraxin and its metabolite, fraxetin, in rat plasma by liquid chromatography-tandem mass spectrometry and its application in a pharmacokinetic study. J Chromatogr B Analyt Technol Biomed Life Sci. 2016 Apr 1;1017-1018:70-74. doi: 10.1016/j.jchromb.2016.02.030. Epub 2016 Feb 23. [PubMed:26945887 ]
  3. Chang BY, Jung YS, Yoon CS, Oh JS, Hong JH, Kim YC, Kim SY: Fraxin Prevents Chemically Induced Hepatotoxicity by Reducing Oxidative Stress. Molecules. 2017 Apr 6;22(4). pii: molecules22040587. doi: 10.3390/molecules22040587. [PubMed:28383514 ]
  4. Niu X, Liu F, Li W, Zhi W, Yao Q, Zhao J, Yang G, Wang X, Qin L, He Z: Hepatoprotective effect of fraxin against carbon tetrachloride-induced hepatotoxicity in vitro and in vivo through regulating hepatic antioxidant, inflammation response and the MAPK-NF-kappaB signaling pathway. Biomed Pharmacother. 2017 Nov;95:1091-1102. doi: 10.1016/j.biopha.2017.09.029. Epub 2017 Sep 14. [PubMed:28922728 ]
  5. Owczarek A, Klys A, Olszewska MA: A validated (1)H qNMR method for direct and simultaneous quantification of esculin, fraxin and (-)-epicatechin in Hippocastani cortex. Talanta. 2019 Jan 15;192:263-269. doi: 10.1016/j.talanta.2018.09.036. Epub 2018 Sep 15. [PubMed:30348388 ]
  6. Aleksandra Owczarek, Arkadiusz Kłys, Monika A.Olszewska (2019). Aleksandra Owczarek, Arkadiusz Kłys, Monika A.Olszewska A validated 1H qNMR method for direct and simultaneous quantification of esculin, fraxin and (–)-epicatechin in Hippocastani cortex. Talanta Volume 192, 15 January 2019, Pages 263-269. DOI: 10.1016/j.talanta.2018.09.036. Talanta.