NP-MRD: Showing NP-Card for wilsonol H (NP0043524)

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Record Information

Version

1.0

Created at

2021-06-21 00:54:36 UTC

Updated at

2021-06-30 00:19:15 UTC

NP-MRD ID

NP0043524

Secondary Accession Numbers

None

Natural Product Identification

Common Name

wilsonol H

Provided By

JEOL Database JEOL Logo

Description

WILSONOL H belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units. wilsonol H is found in Cinnamomum wilsonii. It was first documented in 2002 (PMID: 29437326). Based on a literature review a significant number of articles have been published on WILSONOL H (PMID: 27466641) (PMID: 27253005) (PMID: 26389468) (PMID: 22342782).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306212102543D          

 42 42  0  0  0  0            999 V2000
   -1.9234   -2.2379    3.9893 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2712   -0.8723    4.1702 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4313   -0.9225    5.3194 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4288   -0.3623    3.0341 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1636   -0.9844    1.8699 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6942   -0.4684    0.7142 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8861    0.9512    0.8840 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1407   -1.1180    0.7372 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.9291   -0.6827    2.0024 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1281   -2.6652    0.7440 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9522   -0.6193   -0.4877 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.2378   -0.8497   -1.8134 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0049   -0.2859   -2.8876 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8539   -0.1911   -1.8345 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2301   -0.5338   -3.0911 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0473   -0.6689   -0.6717 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.3954    0.0794   -0.7347 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3619   -2.0575   -0.9027 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6057   -2.2485    3.1336 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4927   -2.5052    4.8866 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1728   -3.0252    3.8556 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0555   -0.1351    4.3740 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3194   -1.4993    5.0955 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0150    0.6135    3.2282 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5850   -1.9737    1.6917 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0285    1.3379    1.1312 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0154    0.4064    2.0771 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9493   -1.0847    1.9845 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4566   -1.0478    2.9201 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6176   -3.0621    1.6278 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1515   -3.0593    0.7666 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6506   -3.0949   -0.1381 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9362   -1.1063   -0.5201 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1745    0.4523   -0.3871 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1523   -1.9188   -2.0363 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8983   -0.6704   -2.8367 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9582    0.9010   -1.8245 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9088   -0.3155   -3.7632 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2697    1.1633   -0.6527 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9185   -0.1281   -1.6756 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0736   -0.2549    0.0576 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6009   -2.1034   -1.8528 H   0  0  0  0  0  0  0  0  0  0  0  0
  6  5  1  0  0  0  0
 12 14  1  0  0  0  0
  5  4  2  0  0  0  0
 14 16  1  0  0  0  0
  4  2  1  0  0  0  0
 16  6  1  0  0  0  0
  2  1  1  0  0  0  0
  6  8  1  0  0  0  0
  2  3  1  0  0  0  0
 14 15  1  0  0  0  0
  8  9  1  1  0  0  0
 16 18  1  6  0  0  0
 11 12  1  0  0  0  0
 16 17  1  0  0  0  0
  8 10  1  0  0  0  0
 12 13  1  0  0  0  0
 11  8  1  0  0  0  0
  6  7  1  1  0  0  0
 11 33  1  0  0  0  0
 11 34  1  0  0  0  0
 12 35  1  6  0  0  0
 14 37  1  6  0  0  0
  9 27  1  0  0  0  0
  9 28  1  0  0  0  0
  9 29  1  0  0  0  0
 10 30  1  0  0  0  0
 10 31  1  0  0  0  0
 10 32  1  0  0  0  0
  5 25  1  0  0  0  0
  4 24  1  0  0  0  0
  2 22  1  1  0  0  0
  1 19  1  0  0  0  0
  1 20  1  0  0  0  0
  1 21  1  0  0  0  0
  3 23  1  0  0  0  0
 15 38  1  0  0  0  0
 18 42  1  0  0  0  0
 17 39  1  0  0  0  0
 17 40  1  0  0  0  0
 17 41  1  0  0  0  0
 13 36  1  0  0  0  0
  7 26  1  0  0  0  0
M  END

     RDKit          3D

 42 42  0  0  0  0  0  0  0  0999 V2000
   -1.9234   -2.2379    3.9893 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2712   -0.8723    4.1702 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4313   -0.9225    5.3194 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4288   -0.3623    3.0341 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1636   -0.9844    1.8699 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6942   -0.4684    0.7142 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8861    0.9512    0.8840 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1407   -1.1180    0.7372 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.9291   -0.6827    2.0024 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1281   -2.6652    0.7440 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9522   -0.6193   -0.4877 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2378   -0.8497   -1.8134 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0049   -0.2859   -2.8876 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8539   -0.1911   -1.8345 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2301   -0.5338   -3.0911 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0473   -0.6689   -0.6717 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.3954    0.0794   -0.7347 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3619   -2.0575   -0.9027 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6057   -2.2485    3.1336 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4927   -2.5052    4.8866 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1728   -3.0252    3.8556 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0555   -0.1351    4.3740 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3194   -1.4993    5.0955 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0150    0.6135    3.2282 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5850   -1.9737    1.6917 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0285    1.3379    1.1312 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0154    0.4064    2.0771 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9493   -1.0847    1.9845 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4566   -1.0478    2.9201 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6176   -3.0621    1.6278 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1515   -3.0593    0.7666 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6506   -3.0949   -0.1381 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9362   -1.1063   -0.5201 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1745    0.4523   -0.3871 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1523   -1.9188   -2.0363 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8983   -0.6704   -2.8367 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9582    0.9010   -1.8245 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9088   -0.3155   -3.7632 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2697    1.1633   -0.6527 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9185   -0.1281   -1.6756 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0736   -0.2549    0.0576 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6009   -2.1034   -1.8528 H   0  0  0  0  0  0  0  0  0  0  0  0
  6  5  1  0
 12 14  1  0
  5  4  2  0
 14 16  1  0
  4  2  1  0
 16  6  1  0
  2  1  1  0
  6  8  1  0
  2  3  1  0
 14 15  1  0
  8  9  1  1
 16 18  1  6
 11 12  1  0
 16 17  1  0
  8 10  1  0
 12 13  1  0
 11  8  1  0
  6  7  1  1
 11 33  1  0
 11 34  1  0
 12 35  1  6
 14 37  1  6
  9 27  1  0
  9 28  1  0
  9 29  1  0
 10 30  1  0
 10 31  1  0
 10 32  1  0
  5 25  1  0
  4 24  1  0
  2 22  1  1
  1 19  1  0
  1 20  1  0
  1 21  1  0
  3 23  1  0
 15 38  1  0
 18 42  1  0
 17 39  1  0
 17 40  1  0
 17 41  1  0
 13 36  1  0
  7 26  1  0
M  END


  Mrv1652306212102543D          

 42 42  0  0  0  0            999 V2000
   -1.9234   -2.2379    3.9893 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2712   -0.8723    4.1702 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4313   -0.9225    5.3194 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4288   -0.3623    3.0341 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1636   -0.9844    1.8699 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6942   -0.4684    0.7142 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8861    0.9512    0.8840 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1407   -1.1180    0.7372 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.9291   -0.6827    2.0024 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1281   -2.6652    0.7440 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9522   -0.6193   -0.4877 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.2378   -0.8497   -1.8134 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0049   -0.2859   -2.8876 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8539   -0.1911   -1.8345 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2301   -0.5338   -3.0911 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0473   -0.6689   -0.6717 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.3954    0.0794   -0.7347 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3619   -2.0575   -0.9027 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6057   -2.2485    3.1336 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4927   -2.5052    4.8866 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1728   -3.0252    3.8556 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0555   -0.1351    4.3740 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3194   -1.4993    5.0955 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0150    0.6135    3.2282 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5850   -1.9737    1.6917 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0285    1.3379    1.1312 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0154    0.4064    2.0771 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9493   -1.0847    1.9845 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4566   -1.0478    2.9201 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6176   -3.0621    1.6278 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1515   -3.0593    0.7666 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6506   -3.0949   -0.1381 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9362   -1.1063   -0.5201 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1745    0.4523   -0.3871 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1523   -1.9188   -2.0363 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8983   -0.6704   -2.8367 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9582    0.9010   -1.8245 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9088   -0.3155   -3.7632 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2697    1.1633   -0.6527 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9185   -0.1281   -1.6756 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0736   -0.2549    0.0576 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6009   -2.1034   -1.8528 H   0  0  0  0  0  0  0  0  0  0  0  0
  6  5  1  0  0  0  0
 12 14  1  0  0  0  0
  5  4  2  0  0  0  0
 14 16  1  0  0  0  0
  4  2  1  0  0  0  0
 16  6  1  0  0  0  0
  2  1  1  0  0  0  0
  6  8  1  0  0  0  0
  2  3  1  0  0  0  0
 14 15  1  0  0  0  0
  8  9  1  1  0  0  0
 16 18  1  6  0  0  0
 11 12  1  0  0  0  0
 16 17  1  0  0  0  0
  8 10  1  0  0  0  0
 12 13  1  0  0  0  0
 11  8  1  0  0  0  0
  6  7  1  1  0  0  0
 11 33  1  0  0  0  0
 11 34  1  0  0  0  0
 12 35  1  6  0  0  0
 14 37  1  6  0  0  0
  9 27  1  0  0  0  0
  9 28  1  0  0  0  0
  9 29  1  0  0  0  0
 10 30  1  0  0  0  0
 10 31  1  0  0  0  0
 10 32  1  0  0  0  0
  5 25  1  0  0  0  0
  4 24  1  0  0  0  0
  2 22  1  1  0  0  0
  1 19  1  0  0  0  0
  1 20  1  0  0  0  0
  1 21  1  0  0  0  0
  3 23  1  0  0  0  0
 15 38  1  0  0  0  0
 18 42  1  0  0  0  0
 17 39  1  0  0  0  0
 17 40  1  0  0  0  0
 17 41  1  0  0  0  0
 13 36  1  0  0  0  0
  7 26  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0043524

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@@]([H])(C(\[H])=C(/[H])[C@]1(O[H])[C@@](O[H])(C([H])([H])[H])[C@]([H])(O[H])[C@@]([H])(O[H])C([H])([H])C1(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C13H24O5/c1-8(14)5-6-13(18)11(2,3)7-9(15)10(16)12(13,4)17/h5-6,8-10,14-18H,7H2,1-4H3/b6-5+/t8-,9+,10-,12-,13-/m1/s1

> <INCHI_KEY>
OPHSNQSZCRVYBC-SARQSPIOSA-N

> <FORMULA>
C13H24O5

> <MOLECULAR_WEIGHT>
260.33

> <EXACT_MASS>
260.162373873

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
42

> <JCHEM_AVERAGE_POLARIZABILITY>
27.676167401573608

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1R,2R,3R,4S)-1-[(1E,3R)-3-hydroxybut-1-en-1-yl]-2,6,6-trimethylcyclohexane-1,2,3,4-tetrol

> <ALOGPS_LOGP>
-0.08

> <JCHEM_LOGP>
-0.7430096136666661

> <ALOGPS_LOGS>
-0.90

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.31875180042443

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.411049733786001

> <JCHEM_PKA_STRONGEST_BASIC>
-2.6683674443713663

> <JCHEM_POLAR_SURFACE_AREA>
101.15

> <JCHEM_REFRACTIVITY>
67.7872

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.29e+01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2R,3R,4S)-1-[(1E,3R)-3-hydroxybut-1-en-1-yl]-2,6,6-trimethylcyclohexane-1,2,3,4-tetrol

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 42 42  0  0  0  0  0  0  0  0999 V2000
   -1.9234   -2.2379    3.9893 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2712   -0.8723    4.1702 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4313   -0.9225    5.3194 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4288   -0.3623    3.0341 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1636   -0.9844    1.8699 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6942   -0.4684    0.7142 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8861    0.9512    0.8840 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1407   -1.1180    0.7372 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.9291   -0.6827    2.0024 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1281   -2.6652    0.7440 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9522   -0.6193   -0.4877 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2378   -0.8497   -1.8134 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0049   -0.2859   -2.8876 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8539   -0.1911   -1.8345 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2301   -0.5338   -3.0911 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0473   -0.6689   -0.6717 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.3954    0.0794   -0.7347 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3619   -2.0575   -0.9027 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6057   -2.2485    3.1336 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4927   -2.5052    4.8866 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1728   -3.0252    3.8556 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0555   -0.1351    4.3740 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3194   -1.4993    5.0955 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0150    0.6135    3.2282 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5850   -1.9737    1.6917 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0285    1.3379    1.1312 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0154    0.4064    2.0771 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9493   -1.0847    1.9845 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4566   -1.0478    2.9201 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6176   -3.0621    1.6278 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1515   -3.0593    0.7666 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6506   -3.0949   -0.1381 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9362   -1.1063   -0.5201 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1745    0.4523   -0.3871 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1523   -1.9188   -2.0363 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8983   -0.6704   -2.8367 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9582    0.9010   -1.8245 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9088   -0.3155   -3.7632 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2697    1.1633   -0.6527 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9185   -0.1281   -1.6756 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0736   -0.2549    0.0576 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6009   -2.1034   -1.8528 H   0  0  0  0  0  0  0  0  0  0  0  0
  6  5  1  0
 12 14  1  0
  5  4  2  0
 14 16  1  0
  4  2  1  0
 16  6  1  0
  2  1  1  0
  6  8  1  0
  2  3  1  0
 14 15  1  0
  8  9  1  1
 16 18  1  6
 11 12  1  0
 16 17  1  0
  8 10  1  0
 12 13  1  0
 11  8  1  0
  6  7  1  1
 11 33  1  0
 11 34  1  0
 12 35  1  6
 14 37  1  6
  9 27  1  0
  9 28  1  0
  9 29  1  0
 10 30  1  0
 10 31  1  0
 10 32  1  0
  5 25  1  0
  4 24  1  0
  2 22  1  1
  1 19  1  0
  1 20  1  0
  1 21  1  0
  3 23  1  0
 15 38  1  0
 18 42  1  0
 17 39  1  0
 17 40  1  0
 17 41  1  0
 13 36  1  0
  7 26  1  0
M  END

HEADER    PROTEIN                                 21-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   21-JUN-21         0                                  
HETATM    1  C   UNK     0      -1.923  -2.238   3.989  0.00  0.00           C+0
HETATM    2  C   UNK     0      -1.271  -0.872   4.170  0.00  0.00           C+0
HETATM    3  O   UNK     0      -0.431  -0.923   5.319  0.00  0.00           O+0
HETATM    4  C   UNK     0      -0.429  -0.362   3.034  0.00  0.00           C+0
HETATM    5  C   UNK     0      -0.164  -0.984   1.870  0.00  0.00           C+0
HETATM    6  C   UNK     0       0.694  -0.468   0.714  0.00  0.00           C+0
HETATM    7  O   UNK     0       0.886   0.951   0.884  0.00  0.00           O+0
HETATM    8  C   UNK     0       2.141  -1.118   0.737  0.00  0.00           C+0
HETATM    9  C   UNK     0       2.929  -0.683   2.002  0.00  0.00           C+0
HETATM   10  C   UNK     0       2.128  -2.665   0.744  0.00  0.00           C+0
HETATM   11  C   UNK     0       2.952  -0.619  -0.488  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.238  -0.850  -1.813  0.00  0.00           C+0
HETATM   13  O   UNK     0       3.005  -0.286  -2.888  0.00  0.00           O+0
HETATM   14  C   UNK     0       0.854  -0.191  -1.835  0.00  0.00           C+0
HETATM   15  O   UNK     0       0.230  -0.534  -3.091  0.00  0.00           O+0
HETATM   16  C   UNK     0      -0.047  -0.669  -0.672  0.00  0.00           C+0
HETATM   17  C   UNK     0      -1.395   0.079  -0.735  0.00  0.00           C+0
HETATM   18  O   UNK     0      -0.362  -2.058  -0.903  0.00  0.00           O+0
HETATM   19  H   UNK     0      -2.606  -2.248   3.134  0.00  0.00           H+0
HETATM   20  H   UNK     0      -2.493  -2.505   4.887  0.00  0.00           H+0
HETATM   21  H   UNK     0      -1.173  -3.025   3.856  0.00  0.00           H+0
HETATM   22  H   UNK     0      -2.055  -0.135   4.374  0.00  0.00           H+0
HETATM   23  H   UNK     0       0.319  -1.499   5.096  0.00  0.00           H+0
HETATM   24  H   UNK     0       0.015   0.614   3.228  0.00  0.00           H+0
HETATM   25  H   UNK     0      -0.585  -1.974   1.692  0.00  0.00           H+0
HETATM   26  H   UNK     0       0.029   1.338   1.131  0.00  0.00           H+0
HETATM   27  H   UNK     0       3.015   0.406   2.077  0.00  0.00           H+0
HETATM   28  H   UNK     0       3.949  -1.085   1.984  0.00  0.00           H+0
HETATM   29  H   UNK     0       2.457  -1.048   2.920  0.00  0.00           H+0
HETATM   30  H   UNK     0       1.618  -3.062   1.628  0.00  0.00           H+0
HETATM   31  H   UNK     0       3.151  -3.059   0.767  0.00  0.00           H+0
HETATM   32  H   UNK     0       1.651  -3.095  -0.138  0.00  0.00           H+0
HETATM   33  H   UNK     0       3.936  -1.106  -0.520  0.00  0.00           H+0
HETATM   34  H   UNK     0       3.175   0.452  -0.387  0.00  0.00           H+0
HETATM   35  H   UNK     0       2.152  -1.919  -2.036  0.00  0.00           H+0
HETATM   36  H   UNK     0       3.898  -0.670  -2.837  0.00  0.00           H+0
HETATM   37  H   UNK     0       0.958   0.901  -1.825  0.00  0.00           H+0
HETATM   38  H   UNK     0       0.909  -0.316  -3.763  0.00  0.00           H+0
HETATM   39  H   UNK     0      -1.270   1.163  -0.653  0.00  0.00           H+0
HETATM   40  H   UNK     0      -1.919  -0.128  -1.676  0.00  0.00           H+0
HETATM   41  H   UNK     0      -2.074  -0.255   0.058  0.00  0.00           H+0
HETATM   42  H   UNK     0      -0.601  -2.103  -1.853  0.00  0.00           H+0
CONECT    1    2   19   20   21                                             
CONECT    2    4    1    3   22                                             
CONECT    3    2   23                                                       
CONECT    4    5    2   24                                                  
CONECT    5    6    4   25                                                  
CONECT    6    5   16    8    7                                             
CONECT    7    6   26                                                       
CONECT    8    6    9   10   11                                             
CONECT    9    8   27   28   29                                             
CONECT   10    8   30   31   32                                             
CONECT   11   12    8   33   34                                             
CONECT   12   14   11   13   35                                             
CONECT   13   12   36                                                       
CONECT   14   12   16   15   37                                             
CONECT   15   14   38                                                       
CONECT   16   14    6   18   17                                             
CONECT   17   16   39   40   41                                             
CONECT   18   16   42                                                       
CONECT   19    1                                                            
CONECT   20    1                                                            
CONECT   21    1                                                            
CONECT   22    2                                                            
CONECT   23    3                                                            
CONECT   24    4                                                            
CONECT   25    5                                                            
CONECT   26    7                                                            
CONECT   27    9                                                            
CONECT   28    9                                                            
CONECT   29    9                                                            
CONECT   30   10                                                            
CONECT   31   10                                                            
CONECT   32   10                                                            
CONECT   33   11                                                            
CONECT   34   11                                                            
CONECT   35   12                                                            
CONECT   36   13                                                            
CONECT   37   14                                                            
CONECT   38   15                                                            
CONECT   39   17                                                            
CONECT   40   17                                                            
CONECT   41   17                                                            
CONECT   42   18                                                            
MASTER        0    0    0    0    0    0    0    0   42    0   84    0
END

RDKit          3D

42 42  0  0  0  0  0  0  0  0999 V2000
   -1.9234   -2.2379    3.9893 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2712   -0.8723    4.1702 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4313   -0.9225    5.3194 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4288   -0.3623    3.0341 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1636   -0.9844    1.8699 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6942   -0.4684    0.7142 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8861    0.9512    0.8840 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1407   -1.1180    0.7372 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.9291   -0.6827    2.0024 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1281   -2.6652    0.7440 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9522   -0.6193   -0.4877 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2378   -0.8497   -1.8134 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0049   -0.2859   -2.8876 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8539   -0.1911   -1.8345 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2301   -0.5338   -3.0911 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0473   -0.6689   -0.6717 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.3954    0.0794   -0.7347 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3619   -2.0575   -0.9027 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6057   -2.2485    3.1336 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4927   -2.5052    4.8866 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1728   -3.0252    3.8556 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0555   -0.1351    4.3740 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3194   -1.4993    5.0955 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0150    0.6135    3.2282 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5850   -1.9737    1.6917 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0285    1.3379    1.1312 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0154    0.4064    2.0771 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9493   -1.0847    1.9845 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4566   -1.0478    2.9201 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6176   -3.0621    1.6278 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1515   -3.0593    0.7666 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6506   -3.0949   -0.1381 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9362   -1.1063   -0.5201 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1745    0.4523   -0.3871 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1523   -1.9188   -2.0363 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8983   -0.6704   -2.8367 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9582    0.9010   -1.8245 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9088   -0.3155   -3.7632 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2697    1.1633   -0.6527 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9185   -0.1281   -1.6756 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0736   -0.2549    0.0576 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6009   -2.1034   -1.8528 H   0  0  0  0  0  0  0  0  0  0  0  0
  6  5  1  0
 12 14  1  0
  5  4  2  0
 14 16  1  0
  4  2  1  0
 16  6  1  0
  2  1  1  0
  6  8  1  0
  2  3  1  0
 14 15  1  0
  8  9  1  1
 16 18  1  6
 11 12  1  0
 16 17  1  0
  8 10  1  0
 12 13  1  0
 11  8  1  0
  6  7  1  1
 11 33  1  0
 11 34  1  0
 12 35  1  6
 14 37  1  6
  9 27  1  0
  9 28  1  0
  9 29  1  0
 10 30  1  0
 10 31  1  0
 10 32  1  0
  5 25  1  0
  4 24  1  0
  2 22  1  1
  1 19  1  0
  1 20  1  0
  1 21  1  0
  3 23  1  0
 15 38  1  0
 18 42  1  0
 17 39  1  0
 17 40  1  0
 17 41  1  0
 13 36  1  0
  7 26  1  0
M  END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₃H₂₄O₅

Average Mass

260.3300 Da

Monoisotopic Mass

260.16237 Da

IUPAC Name

(1R,2R,3R,4S)-1-[(1E,3R)-3-hydroxybut-1-en-1-yl]-2,6,6-trimethylcyclohexane-1,2,3,4-tetrol

Traditional Name

(1R,2R,3R,4S)-1-[(1E,3R)-3-hydroxybut-1-en-1-yl]-2,6,6-trimethylcyclohexane-1,2,3,4-tetrol

CAS Registry Number

Not Available

SMILES

[H]O[C@@]([H])(C(\[H])=C(/[H])[C@]1(O[H])[C@@](O[H])(C([H])([H])[H])[C@]([H])(O[H])[C@@]([H])(O[H])C([H])([H])C1(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H]

InChI Identifier

InChI=1S/C13H24O5/c1-8(14)5-6-13(18)11(2,3)7-9(15)10(16)12(13,4)17/h5-6,8-10,14-18H,7H2,1-4H3/b6-5+/t8-,9+,10-,12-,13-/m1/s1

InChI Key

OPHSNQSZCRVYBC-SARQSPIOSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Cinnamomum wilsonii	JEOL database	Shu, P., et al, J. Nat. Prod. 76, 1303 (2013)

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Sesquiterpenoids

Direct Parent

Sesquiterpenoids

Alternative Parents

Substituents

Cyclofarsesane sesquiterpenoid
Megastigmane sesquiterpenoid
Sesquiterpenoid
Ionone derivative
Cyclohexanol
Cyclitol or derivatives
Tertiary alcohol
Cyclic alcohol
Secondary alcohol
Polyol
Organic oxygen compound
Hydrocarbon derivative
Organooxygen compound
Alcohol
Aliphatic homomonocyclic compound

Molecular Framework

Aliphatic homomonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	-0.08	ALOGPS
logP	-0.74	ChemAxon
logS	-0.9	ALOGPS
pKa (Strongest Acidic)	12.41	ChemAxon
pKa (Strongest Basic)	-2.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	101.15 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	67.79 m³·mol⁻¹	ChemAxon
Polarizability	27.68 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

30823260

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

71746620

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Authors unspecified: Childhood Cancer Genomics (PDQ(R)): Health Professional Version. 2002. [PubMed:27466641 ]
Authors unspecified: Thyroid Cancer Screening (PDQ(R)): Patient Version. 2002. [PubMed:29437326 ]
Authors unspecified: Childhood Vascular Tumors Treatment (PDQ(R)): Patient Version. 2002. [PubMed:27253005 ]
Authors unspecified: Stomach (Gastric) Cancer Prevention (PDQ(R)): Patient Version. 2002. [PubMed:26389468 ]
Jiang L, He S, Sun C, Pan Y: Selective (1)O(2) quenchers, oligostilbenes, from Vitis wilsonae: structural identification and biogenetic relationship. Phytochemistry. 2012 May;77:294-303. doi: 10.1016/j.phytochem.2012.01.021. Epub 2012 Feb 17. [PubMed:22342782 ]
Shu, P., et al. (2013). Shu, P., et al, J. Nat. Prod. 76, 1303 (2013). J. Nat. Prod..

Showing NP-Card for wilsonol H (NP0043524)

MOL for NP0043524 (wilsonol H)

3D MOL for NP0043524 (wilsonol H)

3D SDF for NP0043524 (wilsonol H)

3D-SDF for NP0043524 (wilsonol H)

PDB for NP0043524 (wilsonol H)

3D PDB for NP0043524 (wilsonol H)

SMILES for NP0043524 (wilsonol H)

INCHI for NP0043524 (wilsonol H)

Structure for NP0043524 (wilsonol H)

3D Structure for NP0043524 (wilsonol H)