NP-MRD: Showing NP-Card for nemoralisin A (NP0043487)

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Record Information

Version

2.0

Created at

2021-06-21 00:53:05 UTC

Updated at

2021-06-30 00:19:11 UTC

NP-MRD ID

NP0043487

Secondary Accession Numbers

None

Natural Product Identification

Common Name

nemoralisin A

Provided By

JEOL Database JEOL Logo

Description

CHEMBL2392317 belongs to the class of organic compounds known as dihydropyranones. Dihydropyranones are compounds containing a hydrogenated pyran ring which bears a ketone, and contains one double bond. nemoralisin A is found in Aphanamixis grandifolia and Aphanamixis polystachya. nemoralisin A was first documented in 2013 (Zhang, Y., et al.). Based on a literature review very few articles have been published on CHEMBL2392317.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306212102533D          

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     RDKit          3D

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   -1.5979   -3.7646    2.7897 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5647   -4.4171    1.4564 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7403   -3.2489   -0.8844 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5470   -1.6914   -1.0019 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5186   -3.1648   -0.8572 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4646    1.3121   -1.7628 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5275   -0.1545   -1.6979 H   0  0  0  0  0  0  0  0  0  0  0  0
  6  4  1  0  0  0  0
  4  5  2  0  0  0  0
  2  1  1  0  0  0  0
  7  8  1  0  0  0  0
  7 30  1  6  0  0  0
  3  2  2  0  0  0  0
  9 10  1  0  0  0  0
  8  9  2  0  0  0  0
 11 12  1  0  0  0  0
  3  4  1  0  0  0  0
 15 16  1  0  0  0  0
 18 17  2  0  0  0  0
  9 11  1  0  0  0  0
  2 25  1  0  0  0  0
 11 13  1  0  0  0  0
 25  7  1  0  0  0  0
 13 14  1  0  0  0  0
 17 24  1  0  0  0  0
 24 21  1  0  0  0  0
 21 19  1  0  0  0  0
 19 18  1  0  0  0  0
  7  6  1  0  0  0  0
 19 20  2  0  0  0  0
 14 15  1  0  0  0  0
 21 22  1  1  0  0  0
 15 17  1  0  0  0  0
 21 23  1  0  0  0  0
  3 29  1  0  0  0  0
 25 52  1  0  0  0  0
 25 53  1  0  0  0  0
  8 31  1  0  0  0  0
 11 35  1  6  0  0  0
 13 37  1  0  0  0  0
 13 38  1  0  0  0  0
 14 39  1  0  0  0  0
 14 40  1  0  0  0  0
 15 41  1  6  0  0  0
  1 26  1  0  0  0  0
  1 27  1  0  0  0  0
  1 28  1  0  0  0  0
 10 32  1  0  0  0  0
 10 33  1  0  0  0  0
 10 34  1  0  0  0  0
 12 36  1  0  0  0  0
 16 42  1  0  0  0  0
 16 43  1  0  0  0  0
 16 44  1  0  0  0  0
 18 45  1  0  0  0  0
 22 46  1  0  0  0  0
 22 47  1  0  0  0  0
 22 48  1  0  0  0  0
 23 49  1  0  0  0  0
 23 50  1  0  0  0  0
 23 51  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0043487

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@]([H])(C(=C(/[H])[C@@]1([H])OC(=O)C([H])=C(C([H])([H])[H])C1([H])[H])\C([H])([H])[H])C([H])([H])C([H])([H])[C@]([H])(C1=C([H])C(=O)C(O1)(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C20H28O5/c1-12-8-15(24-19(23)9-12)10-14(3)16(21)7-6-13(2)17-11-18(22)20(4,5)25-17/h9-11,13,15-16,21H,6-8H2,1-5H3/b14-10+/t13-,15+,16+/m1/s1

> <INCHI_KEY>
MVGBWGQAUHVNGU-QUQBVAGWSA-N

> <FORMULA>
C20H28O5

> <MOLECULAR_WEIGHT>
348.439

> <EXACT_MASS>
348.193674002

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
53

> <JCHEM_AVERAGE_POLARIZABILITY>
38.201938732954275

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(6S)-6-[(1E,3S,6R)-6-(5,5-dimethyl-4-oxo-4,5-dihydrofuran-2-yl)-3-hydroxy-2-methylhept-1-en-1-yl]-4-methyl-5,6-dihydro-2H-pyran-2-one

> <ALOGPS_LOGP>
3.24

> <JCHEM_LOGP>
3.2873644029999984

> <ALOGPS_LOGS>
-4.09

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
17.80278997882015

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.612926287326708

> <JCHEM_PKA_STRONGEST_BASIC>
-2.967930676677538

> <JCHEM_POLAR_SURFACE_AREA>
72.83

> <JCHEM_REFRACTIVITY>
98.42129999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.83e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(6S)-6-[(1E,3S,6R)-6-(5,5-dimethyl-4-oxofuran-2-yl)-3-hydroxy-2-methylhept-1-en-1-yl]-4-methyl-5,6-dihydropyran-2-one

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 53 54  0  0  0  0  0  0  0  0999 V2000
   -1.2136    0.2125   -4.0975 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1799    0.5500   -3.6657 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2143    0.6111   -4.5190 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5981    0.8486   -4.0614 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5383    0.7159   -4.8337 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7665    1.1653   -2.7542 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6428    1.6958   -2.0271 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.0502    1.7455   -0.5784 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8875    2.7474    0.3127 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2394    4.0715   -0.0033 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3666    2.5680    1.7446 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3082    3.5978    2.0348 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2593    2.6181    2.8094 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0780    1.6626    2.5871 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4423    0.1645    2.5023 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.9761   -0.3675    3.8348 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7077   -0.6999    2.0348 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0125   -0.4485    2.1425 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6238   -1.5969    1.4910 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8327   -1.7291    1.3766 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5595   -2.5427    0.9954 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.6377   -3.8882    1.7012 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5993   -2.6746   -0.5202 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3350   -1.8757    1.3787 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4054    0.8114   -2.2048 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8935    1.0392   -3.8684 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5657   -0.6831   -3.5758 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2732    0.0183   -5.1736 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1075    0.4170   -5.5805 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4591    2.7001   -2.4231 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5338    0.8277   -0.2401 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8685    4.1380   -1.0282 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9537    4.8890    0.1375 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3797    4.2470    0.6503 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9101    1.6224    1.8551 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9745    3.5735    1.3258 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8694    3.6423    2.8828 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7094    2.4327    3.7929 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6356    1.8194    3.4070 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4458    1.9641    1.6708 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2359    0.0468    1.7562 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2456   -0.2314    4.6401 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2073   -1.4369    3.7701 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8989    0.1446    4.1244 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5417    0.3746    2.5825 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7878   -4.5223    1.4259 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5979   -3.7646    2.7897 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5647   -4.4171    1.4564 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7403   -3.2489   -0.8844 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5470   -1.6914   -1.0019 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5186   -3.1648   -0.8572 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4646    1.3121   -1.7628 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5275   -0.1545   -1.6979 H   0  0  0  0  0  0  0  0  0  0  0  0
  6  4  1  0
  4  5  2  0
  2  1  1  0
  7  8  1  0
  7 30  1  6
  3  2  2  0
  9 10  1  0
  8  9  2  0
 11 12  1  0
  3  4  1  0
 15 16  1  0
 18 17  2  0
  9 11  1  0
  2 25  1  0
 11 13  1  0
 25  7  1  0
 13 14  1  0
 17 24  1  0
 24 21  1  0
 21 19  1  0
 19 18  1  0
  7  6  1  0
 19 20  2  0
 14 15  1  0
 21 22  1  1
 15 17  1  0
 21 23  1  0
  3 29  1  0
 25 52  1  0
 25 53  1  0
  8 31  1  0
 11 35  1  6
 13 37  1  0
 13 38  1  0
 14 39  1  0
 14 40  1  0
 15 41  1  6
  1 26  1  0
  1 27  1  0
  1 28  1  0
 10 32  1  0
 10 33  1  0
 10 34  1  0
 12 36  1  0
 16 42  1  0
 16 43  1  0
 16 44  1  0
 18 45  1  0
 22 46  1  0
 22 47  1  0
 22 48  1  0
 23 49  1  0
 23 50  1  0
 23 51  1  0
M  END

HEADER    PROTEIN                                 21-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   21-JUN-21         0                                  
HETATM    1  C   UNK     0      -1.214   0.213  -4.098  0.00  0.00           C+0
HETATM    2  C   UNK     0       0.180   0.550  -3.666  0.00  0.00           C+0
HETATM    3  C   UNK     0       1.214   0.611  -4.519  0.00  0.00           C+0
HETATM    4  C   UNK     0       2.598   0.849  -4.061  0.00  0.00           C+0
HETATM    5  O   UNK     0       3.538   0.716  -4.834  0.00  0.00           O+0
HETATM    6  O   UNK     0       2.767   1.165  -2.754  0.00  0.00           O+0
HETATM    7  C   UNK     0       1.643   1.696  -2.027  0.00  0.00           C+0
HETATM    8  C   UNK     0       2.050   1.746  -0.578  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.888   2.747   0.313  0.00  0.00           C+0
HETATM   10  C   UNK     0       1.239   4.072  -0.003  0.00  0.00           C+0
HETATM   11  C   UNK     0       2.367   2.568   1.745  0.00  0.00           C+0
HETATM   12  O   UNK     0       3.308   3.598   2.035  0.00  0.00           O+0
HETATM   13  C   UNK     0       1.259   2.618   2.809  0.00  0.00           C+0
HETATM   14  C   UNK     0       0.078   1.663   2.587  0.00  0.00           C+0
HETATM   15  C   UNK     0       0.442   0.165   2.502  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.976  -0.368   3.835  0.00  0.00           C+0
HETATM   17  C   UNK     0      -0.708  -0.700   2.035  0.00  0.00           C+0
HETATM   18  C   UNK     0      -2.013  -0.449   2.143  0.00  0.00           C+0
HETATM   19  C   UNK     0      -2.624  -1.597   1.491  0.00  0.00           C+0
HETATM   20  O   UNK     0      -3.833  -1.729   1.377  0.00  0.00           O+0
HETATM   21  C   UNK     0      -1.560  -2.543   0.995  0.00  0.00           C+0
HETATM   22  C   UNK     0      -1.638  -3.888   1.701  0.00  0.00           C+0
HETATM   23  C   UNK     0      -1.599  -2.675  -0.520  0.00  0.00           C+0
HETATM   24  O   UNK     0      -0.335  -1.876   1.379  0.00  0.00           O+0
HETATM   25  C   UNK     0       0.405   0.811  -2.205  0.00  0.00           C+0
HETATM   26  H   UNK     0      -1.894   1.039  -3.868  0.00  0.00           H+0
HETATM   27  H   UNK     0      -1.566  -0.683  -3.576  0.00  0.00           H+0
HETATM   28  H   UNK     0      -1.273   0.018  -5.174  0.00  0.00           H+0
HETATM   29  H   UNK     0       1.107   0.417  -5.580  0.00  0.00           H+0
HETATM   30  H   UNK     0       1.459   2.700  -2.423  0.00  0.00           H+0
HETATM   31  H   UNK     0       2.534   0.828  -0.240  0.00  0.00           H+0
HETATM   32  H   UNK     0       0.869   4.138  -1.028  0.00  0.00           H+0
HETATM   33  H   UNK     0       1.954   4.889   0.138  0.00  0.00           H+0
HETATM   34  H   UNK     0       0.380   4.247   0.650  0.00  0.00           H+0
HETATM   35  H   UNK     0       2.910   1.622   1.855  0.00  0.00           H+0
HETATM   36  H   UNK     0       3.974   3.574   1.326  0.00  0.00           H+0
HETATM   37  H   UNK     0       0.869   3.642   2.883  0.00  0.00           H+0
HETATM   38  H   UNK     0       1.709   2.433   3.793  0.00  0.00           H+0
HETATM   39  H   UNK     0      -0.636   1.819   3.407  0.00  0.00           H+0
HETATM   40  H   UNK     0      -0.446   1.964   1.671  0.00  0.00           H+0
HETATM   41  H   UNK     0       1.236   0.047   1.756  0.00  0.00           H+0
HETATM   42  H   UNK     0       0.246  -0.231   4.640  0.00  0.00           H+0
HETATM   43  H   UNK     0       1.207  -1.437   3.770  0.00  0.00           H+0
HETATM   44  H   UNK     0       1.899   0.145   4.124  0.00  0.00           H+0
HETATM   45  H   UNK     0      -2.542   0.375   2.583  0.00  0.00           H+0
HETATM   46  H   UNK     0      -0.788  -4.522   1.426  0.00  0.00           H+0
HETATM   47  H   UNK     0      -1.598  -3.765   2.790  0.00  0.00           H+0
HETATM   48  H   UNK     0      -2.565  -4.417   1.456  0.00  0.00           H+0
HETATM   49  H   UNK     0      -0.740  -3.249  -0.884  0.00  0.00           H+0
HETATM   50  H   UNK     0      -1.547  -1.691  -1.002  0.00  0.00           H+0
HETATM   51  H   UNK     0      -2.519  -3.165  -0.857  0.00  0.00           H+0
HETATM   52  H   UNK     0      -0.465   1.312  -1.763  0.00  0.00           H+0
HETATM   53  H   UNK     0       0.528  -0.155  -1.698  0.00  0.00           H+0
CONECT    1    2   26   27   28                                             
CONECT    2    1    3   25                                                  
CONECT    3    2    4   29                                                  
CONECT    4    6    5    3                                                  
CONECT    5    4                                                            
CONECT    6    4    7                                                       
CONECT    7    8   30   25    6                                             
CONECT    8    7    9   31                                                  
CONECT    9   10    8   11                                                  
CONECT   10    9   32   33   34                                             
CONECT   11   12    9   13   35                                             
CONECT   12   11   36                                                       
CONECT   13   11   14   37   38                                             
CONECT   14   13   15   39   40                                             
CONECT   15   16   14   17   41                                             
CONECT   16   15   42   43   44                                             
CONECT   17   18   24   15                                                  
CONECT   18   17   19   45                                                  
CONECT   19   21   18   20                                                  
CONECT   20   19                                                            
CONECT   21   24   19   22   23                                             
CONECT   22   21   46   47   48                                             
CONECT   23   21   49   50   51                                             
CONECT   24   17   21                                                       
CONECT   25    2    7   52   53                                             
CONECT   26    1                                                            
CONECT   27    1                                                            
CONECT   28    1                                                            
CONECT   29    3                                                            
CONECT   30    7                                                            
CONECT   31    8                                                            
CONECT   32   10                                                            
CONECT   33   10                                                            
CONECT   34   10                                                            
CONECT   35   11                                                            
CONECT   36   12                                                            
CONECT   37   13                                                            
CONECT   38   13                                                            
CONECT   39   14                                                            
CONECT   40   14                                                            
CONECT   41   15                                                            
CONECT   42   16                                                            
CONECT   43   16                                                            
CONECT   44   16                                                            
CONECT   45   18                                                            
CONECT   46   22                                                            
CONECT   47   22                                                            
CONECT   48   22                                                            
CONECT   49   23                                                            
CONECT   50   23                                                            
CONECT   51   23                                                            
CONECT   52   25                                                            
CONECT   53   25                                                            
MASTER        0    0    0    0    0    0    0    0   53    0  108    0
END

RDKit          3D

53 54  0  0  0  0  0  0  0  0999 V2000
   -1.2136    0.2125   -4.0975 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1799    0.5500   -3.6657 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2143    0.6111   -4.5190 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5981    0.8486   -4.0614 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5383    0.7159   -4.8337 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7665    1.1653   -2.7542 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6428    1.6958   -2.0271 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.0502    1.7455   -0.5784 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8875    2.7474    0.3127 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2394    4.0715   -0.0033 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3666    2.5680    1.7446 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3082    3.5978    2.0348 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2593    2.6181    2.8094 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0780    1.6626    2.5871 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4423    0.1645    2.5023 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.9761   -0.3675    3.8348 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7077   -0.6999    2.0348 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0125   -0.4485    2.1425 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6238   -1.5969    1.4910 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8327   -1.7291    1.3766 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5595   -2.5427    0.9954 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.6377   -3.8882    1.7012 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5993   -2.6746   -0.5202 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3350   -1.8757    1.3787 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4054    0.8114   -2.2048 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8935    1.0392   -3.8684 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5657   -0.6831   -3.5758 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2732    0.0183   -5.1736 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1075    0.4170   -5.5805 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4591    2.7001   -2.4231 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5338    0.8277   -0.2401 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8685    4.1380   -1.0282 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9537    4.8890    0.1375 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3797    4.2470    0.6503 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9101    1.6224    1.8551 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9745    3.5735    1.3258 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8694    3.6423    2.8828 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7094    2.4327    3.7929 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6356    1.8194    3.4070 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4458    1.9641    1.6708 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2359    0.0468    1.7562 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2456   -0.2314    4.6401 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2073   -1.4369    3.7701 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8989    0.1446    4.1244 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5417    0.3746    2.5825 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7878   -4.5223    1.4259 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5979   -3.7646    2.7897 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5647   -4.4171    1.4564 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7403   -3.2489   -0.8844 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5470   -1.6914   -1.0019 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5186   -3.1648   -0.8572 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4646    1.3121   -1.7628 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5275   -0.1545   -1.6979 H   0  0  0  0  0  0  0  0  0  0  0  0
  6  4  1  0
  4  5  2  0
  2  1  1  0
  7  8  1  0
  7 30  1  6
  3  2  2  0
  9 10  1  0
  8  9  2  0
 11 12  1  0
  3  4  1  0
 15 16  1  0
 18 17  2  0
  9 11  1  0
  2 25  1  0
 11 13  1  0
 25  7  1  0
 13 14  1  0
 17 24  1  0
 24 21  1  0
 21 19  1  0
 19 18  1  0
  7  6  1  0
 19 20  2  0
 14 15  1  0
 21 22  1  1
 15 17  1  0
 21 23  1  0
  3 29  1  0
 25 52  1  0
 25 53  1  0
  8 31  1  0
 11 35  1  6
 13 37  1  0
 13 38  1  0
 14 39  1  0
 14 40  1  0
 15 41  1  6
  1 26  1  0
  1 27  1  0
  1 28  1  0
 10 32  1  0
 10 33  1  0
 10 34  1  0
 12 36  1  0
 16 42  1  0
 16 43  1  0
 16 44  1  0
 18 45  1  0
 22 46  1  0
 22 47  1  0
 22 48  1  0
 23 49  1  0
 23 50  1  0
 23 51  1  0
M  END

View in JSmol View DFT Assignments 3D Conformers

Synonyms

Not Available

Chemical Formula

C₂₀H₂₈O₅

Average Mass

348.4390 Da

Monoisotopic Mass

348.19367 Da

IUPAC Name

(6S)-6-[(1E,3S,6R)-6-(5,5-dimethyl-4-oxo-4,5-dihydrofuran-2-yl)-3-hydroxy-2-methylhept-1-en-1-yl]-4-methyl-5,6-dihydro-2H-pyran-2-one

Traditional Name

(6S)-6-[(1E,3S,6R)-6-(5,5-dimethyl-4-oxofuran-2-yl)-3-hydroxy-2-methylhept-1-en-1-yl]-4-methyl-5,6-dihydropyran-2-one

CAS Registry Number

Not Available

SMILES

[H]O[C@]([H])(C(=C(/[H])[C@@]1([H])OC(=O)C([H])=C(C([H])([H])[H])C1([H])[H])\C([H])([H])[H])C([H])([H])C([H])([H])[C@]([H])(C1=C([H])C(=O)C(O1)(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H]

InChI Identifier

InChI=1S/C20H28O5/c1-12-8-15(24-19(23)9-12)10-14(3)16(21)7-6-13(2)17-11-18(22)20(4,5)25-17/h9-11,13,15-16,21H,6-8H2,1-5H3/b14-10+/t13-,15+,16+/m1/s1

InChI Key

MVGBWGQAUHVNGU-QUQBVAGWSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 125 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 150 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 175 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 225 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 250 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Aphanamixis grandifolia	JEOL database	Zhang, Y., et al, J. Nat. Prod. 76, 1191 (2013)
Aphanamixis polystachya	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as dihydropyranones. Dihydropyranones are compounds containing a hydrogenated pyran ring which bears a ketone, and contains one double bond.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Pyrans

Sub Class

Pyranones and derivatives

Direct Parent

Dihydropyranones

Alternative Parents

Substituents

Dihydropyranone
3-furanone
Dihydrofuran
Enoate ester
Alpha,beta-unsaturated carboxylic ester
Vinylogous ester
Cyclic ketone
Secondary alcohol
Lactone
Ketone
Carboxylic acid ester
Monocarboxylic acid or derivatives
Carboxylic acid derivative
Oxacycle
Organooxygen compound
Organic oxide
Organic oxygen compound
Alcohol
Carbonyl group
Hydrocarbon derivative
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.24	ALOGPS
logP	3.29	ChemAxon
logS	-4.1	ALOGPS
pKa (Strongest Acidic)	14.61	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	72.83 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	98.42 m³·mol⁻¹	ChemAxon
Polarizability	38.2 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

30831768

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

71726328

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Zhang, Y., et al. (2013). Zhang, Y., et al, J. Nat. Prod. 76, 1191 (2013). J. Nat. Prod..

Showing NP-Card for nemoralisin A (NP0043487)

MOL for NP0043487 (nemoralisin A)

3D MOL for NP0043487 (nemoralisin A)

3D SDF for NP0043487 (nemoralisin A)

3D-SDF for NP0043487 (nemoralisin A)

PDB for NP0043487 (nemoralisin A)

3D PDB for NP0043487 (nemoralisin A)

SMILES for NP0043487 (nemoralisin A)

INCHI for NP0043487 (nemoralisin A)

Structure for NP0043487 (nemoralisin A)

3D Structure for NP0043487 (nemoralisin A)