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Record Information
Version1.0
Created at2021-06-21 00:52:58 UTC
Updated at2021-06-30 00:19:11 UTC
NP-MRD IDNP0043484
Secondary Accession NumbersNone
Natural Product Identification
Common Nameaphanalide K
Provided ByJEOL DatabaseJEOL Logo
Description(1S,2R,3S,8R,10R,11R,12S,15R,16S,17R,18R)-15-(furan-3-yl)-10,17,18-trihydroxy-2,7,7,11,16-pentamethyl-5,13-dioxo-6-oxatetracyclo[9.7.0.0²,⁸.0¹²,¹⁶]Octadecan-3-yl acetate belongs to the class of organic compounds known as limonoids. These are highly oxygenated, modified terpenoids with a prototypical structure either containing or derived from a precursor with a 4,4,8-trimethyl-17-furanylsteroid skeleton. All naturally occurring citrus limonoids contain a furan ring attached to the D-ring, at C-17, as well as oxygen containing functional groups at C-3, C-4, C-7, C-16 and C-17. aphanalide K is found in Aphanamixis grandifolia. It was first documented in 2002 (PMID: 29437326). Based on a literature review a significant number of articles have been published on (1S,2R,3S,8R,10R,11R,12S,15R,16S,17R,18R)-15-(furan-3-yl)-10,17,18-trihydroxy-2,7,7,11,16-pentamethyl-5,13-dioxo-6-oxatetracyclo[9.7.0.0²,⁸.0¹²,¹⁶]Octadecan-3-yl acetate (PMID: 27466641) (PMID: 27253005) (PMID: 26389468) (PMID: 26389426).
Structure
Thumb
Synonyms
ValueSource
(1S,2R,3S,8R,10R,11R,12S,15R,16S,17R,18R)-15-(Furan-3-yl)-10,17,18-trihydroxy-2,7,7,11,16-pentamethyl-5,13-dioxo-6-oxatetracyclo[9.7.0.0,.0,]octadecan-3-yl acetic acidGenerator
Chemical FormulaC28H38O9
Average Mass518.6030 Da
Monoisotopic Mass518.25158 Da
IUPAC Name(1S,2R,3S,8R,10R,11R,12S,15R,16S,17R,18R)-15-(furan-3-yl)-10,17,18-trihydroxy-2,7,7,11,16-pentamethyl-5,13-dioxo-6-oxatetracyclo[9.7.0.0^{2,8}.0^{12,16}]octadecan-3-yl acetate
Traditional Name(1S,2R,3S,8R,10R,11R,12S,15R,16S,17R,18R)-15-(furan-3-yl)-10,17,18-trihydroxy-2,7,7,11,16-pentamethyl-5,13-dioxo-6-oxatetracyclo[9.7.0.0^{2,8}.0^{12,16}]octadecan-3-yl acetate
CAS Registry NumberNot Available
SMILES
[H]O[C@]1([H])C([H])([H])[C@]2([H])[C@@](C([H])([H])[H])([C@@]3([H])[C@@]([H])(O[H])[C@]([H])(O[H])[C@@]4(C([H])([H])[H])[C@]([H])(C5=C([H])OC([H])=C5[H])C([H])([H])C(=O)[C@@]4([H])[C@]13C([H])([H])[H])[C@@]([H])(OC(=O)C([H])([H])[H])C([H])([H])C(=O)OC2(C([H])([H])[H])C([H])([H])[H]
InChI Identifier
InChI=1S/C28H38O9/c1-13(29)36-19-11-20(32)37-25(2,3)17-10-18(31)28(6)22-16(30)9-15(14-7-8-35-12-14)26(22,4)24(34)21(33)23(28)27(17,19)5/h7-8,12,15,17-19,21-24,31,33-34H,9-11H2,1-6H3/t15-,17-,18+,19-,21+,22+,23+,24-,26-,27+,28-/m0/s1
InChI KeyNMUNZRHSVIUJQI-ORPHTWIOSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 500 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 600 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, DMSO-d6, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Aphanamixis grandifoliaJEOL database
    • Zhang, Y., et al, J. Nat. Prod. 76, 1191 (2013)
Chemical Taxonomy
Description Belongs to the class of organic compounds known as limonoids. These are highly oxygenated, modified terpenoids with a prototypical structure either containing or derived from a precursor with a 4,4,8-trimethyl-17-furanylsteroid skeleton. All naturally occurring citrus limonoids contain a furan ring attached to the D-ring, at C-17, as well as oxygen containing functional groups at C-3, C-4, C-7, C-16 and C-17.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTriterpenoids
Direct ParentLimonoids
Alternative Parents
Substituents
  • Limonoid skeleton
  • Caprolactone
  • Oxepane
  • Dicarboxylic acid or derivatives
  • Cyclic alcohol
  • Heteroaromatic compound
  • Furan
  • Carboxylic acid ester
  • Ketone
  • Lactone
  • Secondary alcohol
  • Oxacycle
  • Carboxylic acid derivative
  • Organoheterocyclic compound
  • Polyol
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Alcohol
  • Organooxygen compound
  • Carbonyl group
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP2.12ALOGPS
logP0.81ChemAxon
logS-3.5ALOGPS
pKa (Strongest Acidic)13.47ChemAxon
pKa (Strongest Basic)-2.9ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area143.5 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity129.46 m³·mol⁻¹ChemAxon
Polarizability53.33 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID58826819
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound71726253
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Authors unspecified: Childhood Cancer Genomics (PDQ(R)): Health Professional Version. 2002. [PubMed:27466641 ]
  2. Authors unspecified: Thyroid Cancer Screening (PDQ(R)): Patient Version. 2002. [PubMed:29437326 ]
  3. Authors unspecified: Childhood Vascular Tumors Treatment (PDQ(R)): Patient Version. 2002. [PubMed:27253005 ]
  4. Authors unspecified: Stomach (Gastric) Cancer Prevention (PDQ(R)): Patient Version. 2002. [PubMed:26389468 ]
  5. Authors unspecified: Childhood Central Nervous System Atypical Teratoid/Rhabdoid Tumor Treatment (PDQ(R)): Health Professional Version. 2002. [PubMed:26389426 ]
  6. Zhang, Y., et al. (2013). Zhang, Y., et al, J. Nat. Prod. 76, 1191 (2013). J. Nat. Prod..