NP-MRD: Showing NP-Card for 3beta-hydroxy-13-hydroxymethyl-12-methoxy-ent-podocarp-6,8,11,13-tetraene (NP0043065)

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Record Information

Version

1.0

Created at

2021-06-21 00:34:16 UTC

Updated at

2021-06-30 00:18:32 UTC

NP-MRD ID

NP0043065

Secondary Accession Numbers

None

Natural Product Identification

Common Name

3beta-hydroxy-13-hydroxymethyl-12-methoxy-ent-podocarp-6,8,11,13-tetraene

Provided By

JEOL Database JEOL Logo

Description

CHEMBL3103101 belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units. 3beta-hydroxy-13-hydroxymethyl-12-methoxy-ent-podocarp-6,8,11,13-tetraene is found in Flueggea virosa. It was first documented in 2014 (Chao, C.-H., et al.). Based on a literature review very few articles have been published on CHEMBL3103101.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306212102343D          

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     RDKit          3D

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  9 10  1  0  0  0  0
 19 42  1  0  0  0  0
 19 43  1  0  0  0  0
 17 40  1  1  0  0  0
 20 44  1  0  0  0  0
 20 45  1  0  0  0  0
 12 32  1  0  0  0  0
 11 31  1  0  0  0  0
  7 27  1  0  0  0  0
  4 26  1  0  0  0  0
 18 41  1  0  0  0  0
 15 34  1  0  0  0  0
 15 35  1  0  0  0  0
 15 36  1  0  0  0  0
 22 46  1  0  0  0  0
 22 47  1  0  0  0  0
 22 48  1  0  0  0  0
 16 37  1  0  0  0  0
 16 38  1  0  0  0  0
 16 39  1  0  0  0  0
  9 28  1  0  0  0  0
  9 29  1  0  0  0  0
  1 23  1  0  0  0  0
  1 24  1  0  0  0  0
  1 25  1  0  0  0  0
 10 30  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0043065

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC([H])([H])C1=C(OC([H])([H])[H])C([H])=C2C(C([H])=C([H])[C@@]3([H])[C@@]2(C([H])([H])[H])C([H])([H])C([H])([H])[C@]([H])(O[H])C3(C([H])([H])[H])C([H])([H])[H])=C1[H]

> <INCHI_IDENTIFIER>
InChI=1S/C19H26O3/c1-18(2)16-6-5-12-9-13(11-20)15(22-4)10-14(12)19(16,3)8-7-17(18)21/h5-6,9-10,16-17,20-21H,7-8,11H2,1-4H3/t16-,17+,19+/m1/s1

> <INCHI_KEY>
OQWQQASPTCXQLO-AOIWGVFYSA-N

> <FORMULA>
C19H26O3

> <MOLECULAR_WEIGHT>
302.414

> <EXACT_MASS>
302.188194697

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
48

> <JCHEM_AVERAGE_POLARIZABILITY>
34.800454000050934

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2S,4aR,10aS)-7-(hydroxymethyl)-6-methoxy-1,1,4a-trimethyl-1,2,3,4,4a,10a-hexahydrophenanthren-2-ol

> <ALOGPS_LOGP>
3.40

> <JCHEM_LOGP>
2.8770092216666674

> <ALOGPS_LOGS>
-4.01

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
15.001264591489562

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.39904867529032

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9296227651158615

> <JCHEM_POLAR_SURFACE_AREA>
49.69

> <JCHEM_REFRACTIVITY>
89.4472

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.95e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2S,4aR,10aS)-7-(hydroxymethyl)-6-methoxy-1,1,4a-trimethyl-2,3,4,10a-tetrahydrophenanthren-2-ol

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 48 50  0  0  0  0  0  0  0  0999 V2000
   -3.8123   -0.7785   -0.8415 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2027    0.4825   -1.0912 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9731    0.7096   -0.5252 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1955   -0.2666    0.1109 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0665    0.0455    0.6502 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5504    1.3661    0.5209 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2205    2.3352   -0.1296 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4863    2.0222   -0.6482 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2980    3.1003   -1.3218 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4684    2.8186   -2.7048 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8718    1.7293    1.0469 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4649    0.9482    1.9616 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7725   -0.3015    2.4766 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.6443   -1.2243    3.4037 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.1022   -0.4163    4.6516 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9322   -1.7460    2.7333 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7801   -2.4241    3.8898 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7878   -1.9635    4.8120 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0583   -3.1532    2.7574 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1955   -2.2100    1.9128 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9838   -1.0183    1.3104 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8765   -1.5435    0.1559 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8168   -0.7545   -1.2748 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2583   -1.5849   -1.3328 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9176   -0.9648    0.2325 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5549   -1.2862    0.1744 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1632    3.3485   -0.2309 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8145    4.0790   -1.2369 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2835    3.1836   -0.8505 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7110    1.8756   -2.7523 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3406    2.6439    0.6993 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4250    1.2476    2.3675 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9944    0.0952    3.1532 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8525    0.3391    4.3961 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5557   -1.0775    5.3996 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2649    0.1010    5.1328 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5054   -0.9392    2.2658 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7471   -2.5089    1.9785 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5884   -2.2158    3.4767 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4107   -3.1364    4.4361 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3379   -2.7444    5.1779 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3984   -3.9207    3.1816 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7772   -3.6830    2.1250 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2715   -2.8064    1.1188 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6264   -1.8323    2.5359 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5824   -0.7895   -0.2077 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4531   -2.4274    0.4263 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2640   -1.8427   -0.7048 H   0  0  0  0  0  0  0  0  0  0  0  0
 19 17  1  0
 19 20  1  0
  5  4  2  0
  6  7  2  0
  7  8  1  0
  8  3  2  0
  3  4  1  0
 17 14  1  0
 17 18  1  0
 21  5  1  0
 14 15  1  1
 13 12  1  0
 21 22  1  6
 12 11  2  0
 14 16  1  0
 11  6  1  0
 13 33  1  1
  5  6  1  0
  8  9  1  0
 14 13  1  0
  3  2  1  0
 21 20  1  0
  2  1  1  0
 21 13  1  0
  9 10  1  0
 19 42  1  0
 19 43  1  0
 17 40  1  1
 20 44  1  0
 20 45  1  0
 12 32  1  0
 11 31  1  0
  7 27  1  0
  4 26  1  0
 18 41  1  0
 15 34  1  0
 15 35  1  0
 15 36  1  0
 22 46  1  0
 22 47  1  0
 22 48  1  0
 16 37  1  0
 16 38  1  0
 16 39  1  0
  9 28  1  0
  9 29  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
 10 30  1  0
M  END

HEADER    PROTEIN                                 21-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   21-JUN-21         0                                  
HETATM    1  C   UNK     0      -3.812  -0.779  -0.842  0.00  0.00           C+0
HETATM    2  O   UNK     0      -3.203   0.483  -1.091  0.00  0.00           O+0
HETATM    3  C   UNK     0      -1.973   0.710  -0.525  0.00  0.00           C+0
HETATM    4  C   UNK     0      -1.196  -0.267   0.111  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.067   0.046   0.650  0.00  0.00           C+0
HETATM    6  C   UNK     0       0.550   1.366   0.521  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.221   2.335  -0.130  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.486   2.022  -0.648  0.00  0.00           C+0
HETATM    9  C   UNK     0      -2.298   3.100  -1.322  0.00  0.00           C+0
HETATM   10  O   UNK     0      -2.468   2.819  -2.705  0.00  0.00           O+0
HETATM   11  C   UNK     0       1.872   1.729   1.047  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.465   0.948   1.962  0.00  0.00           C+0
HETATM   13  C   UNK     0       1.773  -0.302   2.477  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.644  -1.224   3.404  0.00  0.00           C+0
HETATM   15  C   UNK     0       3.102  -0.416   4.652  0.00  0.00           C+0
HETATM   16  C   UNK     0       3.932  -1.746   2.733  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.780  -2.424   3.890  0.00  0.00           C+0
HETATM   18  O   UNK     0       0.788  -1.964   4.812  0.00  0.00           O+0
HETATM   19  C   UNK     0       1.058  -3.153   2.757  0.00  0.00           C+0
HETATM   20  C   UNK     0       0.196  -2.210   1.913  0.00  0.00           C+0
HETATM   21  C   UNK     0       0.984  -1.018   1.310  0.00  0.00           C+0
HETATM   22  C   UNK     0       1.877  -1.544   0.156  0.00  0.00           C+0
HETATM   23  H   UNK     0      -4.817  -0.755  -1.275  0.00  0.00           H+0
HETATM   24  H   UNK     0      -3.258  -1.585  -1.333  0.00  0.00           H+0
HETATM   25  H   UNK     0      -3.918  -0.965   0.233  0.00  0.00           H+0
HETATM   26  H   UNK     0      -1.555  -1.286   0.174  0.00  0.00           H+0
HETATM   27  H   UNK     0       0.163   3.349  -0.231  0.00  0.00           H+0
HETATM   28  H   UNK     0      -1.815   4.079  -1.237  0.00  0.00           H+0
HETATM   29  H   UNK     0      -3.284   3.184  -0.851  0.00  0.00           H+0
HETATM   30  H   UNK     0      -2.711   1.876  -2.752  0.00  0.00           H+0
HETATM   31  H   UNK     0       2.341   2.644   0.699  0.00  0.00           H+0
HETATM   32  H   UNK     0       3.425   1.248   2.368  0.00  0.00           H+0
HETATM   33  H   UNK     0       0.994   0.095   3.153  0.00  0.00           H+0
HETATM   34  H   UNK     0       3.853   0.339   4.396  0.00  0.00           H+0
HETATM   35  H   UNK     0       3.556  -1.077   5.400  0.00  0.00           H+0
HETATM   36  H   UNK     0       2.265   0.101   5.133  0.00  0.00           H+0
HETATM   37  H   UNK     0       4.505  -0.939   2.266  0.00  0.00           H+0
HETATM   38  H   UNK     0       3.747  -2.509   1.978  0.00  0.00           H+0
HETATM   39  H   UNK     0       4.588  -2.216   3.477  0.00  0.00           H+0
HETATM   40  H   UNK     0       2.411  -3.136   4.436  0.00  0.00           H+0
HETATM   41  H   UNK     0       0.338  -2.744   5.178  0.00  0.00           H+0
HETATM   42  H   UNK     0       0.398  -3.921   3.182  0.00  0.00           H+0
HETATM   43  H   UNK     0       1.777  -3.683   2.125  0.00  0.00           H+0
HETATM   44  H   UNK     0      -0.272  -2.806   1.119  0.00  0.00           H+0
HETATM   45  H   UNK     0      -0.626  -1.832   2.536  0.00  0.00           H+0
HETATM   46  H   UNK     0       2.582  -0.790  -0.208  0.00  0.00           H+0
HETATM   47  H   UNK     0       2.453  -2.427   0.426  0.00  0.00           H+0
HETATM   48  H   UNK     0       1.264  -1.843  -0.705  0.00  0.00           H+0
CONECT    1    2   23   24   25                                             
CONECT    2    3    1                                                       
CONECT    3    8    4    2                                                  
CONECT    4    5    3   26                                                  
CONECT    5    4   21    6                                                  
CONECT    6    7   11    5                                                  
CONECT    7    6    8   27                                                  
CONECT    8    7    3    9                                                  
CONECT    9    8   10   28   29                                             
CONECT   10    9   30                                                       
CONECT   11   12    6   31                                                  
CONECT   12   13   11   32                                                  
CONECT   13   12   33   14   21                                             
CONECT   14   17   15   16   13                                             
CONECT   15   14   34   35   36                                             
CONECT   16   14   37   38   39                                             
CONECT   17   19   14   18   40                                             
CONECT   18   17   41                                                       
CONECT   19   17   20   42   43                                             
CONECT   20   19   21   44   45                                             
CONECT   21    5   22   20   13                                             
CONECT   22   21   46   47   48                                             
CONECT   23    1                                                            
CONECT   24    1                                                            
CONECT   25    1                                                            
CONECT   26    4                                                            
CONECT   27    7                                                            
CONECT   28    9                                                            
CONECT   29    9                                                            
CONECT   30   10                                                            
CONECT   31   11                                                            
CONECT   32   12                                                            
CONECT   33   13                                                            
CONECT   34   15                                                            
CONECT   35   15                                                            
CONECT   36   15                                                            
CONECT   37   16                                                            
CONECT   38   16                                                            
CONECT   39   16                                                            
CONECT   40   17                                                            
CONECT   41   18                                                            
CONECT   42   19                                                            
CONECT   43   19                                                            
CONECT   44   20                                                            
CONECT   45   20                                                            
CONECT   46   22                                                            
CONECT   47   22                                                            
CONECT   48   22                                                            
MASTER        0    0    0    0    0    0    0    0   48    0  100    0
END

RDKit          3D

48 50  0  0  0  0  0  0  0  0999 V2000
   -3.8123   -0.7785   -0.8415 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2027    0.4825   -1.0912 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9731    0.7096   -0.5252 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1955   -0.2666    0.1109 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0665    0.0455    0.6502 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5504    1.3661    0.5209 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2205    2.3352   -0.1296 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4863    2.0222   -0.6482 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2980    3.1003   -1.3218 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4684    2.8186   -2.7048 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8718    1.7293    1.0469 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4649    0.9482    1.9616 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7725   -0.3015    2.4766 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.6443   -1.2243    3.4037 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.1022   -0.4163    4.6516 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9322   -1.7460    2.7333 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7801   -2.4241    3.8898 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7878   -1.9635    4.8120 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0583   -3.1532    2.7574 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1955   -2.2100    1.9128 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9838   -1.0183    1.3104 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8765   -1.5435    0.1559 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8168   -0.7545   -1.2748 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2583   -1.5849   -1.3328 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9176   -0.9648    0.2325 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5549   -1.2862    0.1744 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1632    3.3485   -0.2309 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8145    4.0790   -1.2369 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2835    3.1836   -0.8505 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7110    1.8756   -2.7523 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3406    2.6439    0.6993 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4250    1.2476    2.3675 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9944    0.0952    3.1532 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8525    0.3391    4.3961 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5557   -1.0775    5.3996 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2649    0.1010    5.1328 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5054   -0.9392    2.2658 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7471   -2.5089    1.9785 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5884   -2.2158    3.4767 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4107   -3.1364    4.4361 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3379   -2.7444    5.1779 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3984   -3.9207    3.1816 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7772   -3.6830    2.1250 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2715   -2.8064    1.1188 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6264   -1.8323    2.5359 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5824   -0.7895   -0.2077 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4531   -2.4274    0.4263 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2640   -1.8427   -0.7048 H   0  0  0  0  0  0  0  0  0  0  0  0
 19 17  1  0
 19 20  1  0
  5  4  2  0
  6  7  2  0
  7  8  1  0
  8  3  2  0
  3  4  1  0
 17 14  1  0
 17 18  1  0
 21  5  1  0
 14 15  1  1
 13 12  1  0
 21 22  1  6
 12 11  2  0
 14 16  1  0
 11  6  1  0
 13 33  1  1
  5  6  1  0
  8  9  1  0
 14 13  1  0
  3  2  1  0
 21 20  1  0
  2  1  1  0
 21 13  1  0
  9 10  1  0
 19 42  1  0
 19 43  1  0
 17 40  1  1
 20 44  1  0
 20 45  1  0
 12 32  1  0
 11 31  1  0
  7 27  1  0
  4 26  1  0
 18 41  1  0
 15 34  1  0
 15 35  1  0
 15 36  1  0
 22 46  1  0
 22 47  1  0
 22 48  1  0
 16 37  1  0
 16 38  1  0
 16 39  1  0
  9 28  1  0
  9 29  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
 10 30  1  0
M  END

View in JSmol View DFT Assignments 3D Conformers

Synonyms

Not Available

Chemical Formula

C₁₉H₂₆O₃

Average Mass

302.4140 Da

Monoisotopic Mass

302.18819 Da

IUPAC Name

(2S,4aR,10aS)-7-(hydroxymethyl)-6-methoxy-1,1,4a-trimethyl-1,2,3,4,4a,10a-hexahydrophenanthren-2-ol

Traditional Name

(2S,4aR,10aS)-7-(hydroxymethyl)-6-methoxy-1,1,4a-trimethyl-2,3,4,10a-tetrahydrophenanthren-2-ol

CAS Registry Number

Not Available

SMILES

[H]OC([H])([H])C1=C(OC([H])([H])[H])C([H])=C2C(C([H])=C([H])[C@@]3([H])[C@@]2(C([H])([H])[H])C([H])([H])C([H])([H])[C@]([H])(O[H])C3(C([H])([H])[H])C([H])([H])[H])=C1[H]

InChI Identifier

InChI=1S/C19H26O3/c1-18(2)16-6-5-12-9-13(11-20)15(22-4)10-14(12)19(16,3)8-7-17(18)21/h5-6,9-10,16-17,20-21H,7-8,11H2,1-4H3/t16-,17+,19+/m1/s1

InChI Key

OQWQQASPTCXQLO-AOIWGVFYSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 125 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 150 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 175 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 225 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 250 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Flueggea virosa	JEOL database	Chao, C.-H., et al, J. Nat. Prod. 77, 22 (2014)

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Diterpenoids

Direct Parent

Diterpenoids

Alternative Parents

Substituents

Diterpenoid
Hydrophenanthrene
Phenanthrene
Naphthalene
Anisole
Alkyl aryl ether
Benzenoid
Cyclic alcohol
Secondary alcohol
Ether
Primary alcohol
Aromatic alcohol
Alcohol
Hydrocarbon derivative
Organic oxygen compound
Organooxygen compound
Aromatic homopolycyclic compound

Molecular Framework

Aromatic homopolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.4	ALOGPS
logP	2.88	ChemAxon
logS	-4	ALOGPS
pKa (Strongest Acidic)	14.4	ChemAxon
pKa (Strongest Basic)	-2.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	49.69 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	89.45 m³·mol⁻¹	ChemAxon
Polarizability	34.8 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

31125047

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

76317305

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Chao, C.-H., et al. (2014). Chao, C.-H., et al, J. Nat. Prod. 77, 22 (2014). J. Nat. Prod..

Showing NP-Card for 3beta-hydroxy-13-hydroxymethyl-12-methoxy-ent-podocarp-6,8,11,13-tetraene (NP0043065)

MOL for NP0043065 (3beta-hydroxy-13-hydroxymethyl-12-methoxy-ent-podocarp-6,8,11,13-tetraene)

3D MOL for NP0043065 (3beta-hydroxy-13-hydroxymethyl-12-methoxy-ent-podocarp-6,8,11,13-tetraene)

3D SDF for NP0043065 (3beta-hydroxy-13-hydroxymethyl-12-methoxy-ent-podocarp-6,8,11,13-tetraene)

3D-SDF for NP0043065 (3beta-hydroxy-13-hydroxymethyl-12-methoxy-ent-podocarp-6,8,11,13-tetraene)

PDB for NP0043065 (3beta-hydroxy-13-hydroxymethyl-12-methoxy-ent-podocarp-6,8,11,13-tetraene)

3D PDB for NP0043065 (3beta-hydroxy-13-hydroxymethyl-12-methoxy-ent-podocarp-6,8,11,13-tetraene)

SMILES for NP0043065 (3beta-hydroxy-13-hydroxymethyl-12-methoxy-ent-podocarp-6,8,11,13-tetraene)

INCHI for NP0043065 (3beta-hydroxy-13-hydroxymethyl-12-methoxy-ent-podocarp-6,8,11,13-tetraene)

Structure for NP0043065 (3beta-hydroxy-13-hydroxymethyl-12-methoxy-ent-podocarp-6,8,11,13-tetraene)

3D Structure for NP0043065 (3beta-hydroxy-13-hydroxymethyl-12-methoxy-ent-podocarp-6,8,11,13-tetraene)