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Record Information
Version1.0
Created at2021-06-21 00:32:58 UTC
Updated at2021-06-30 00:18:29 UTC
NP-MRD IDNP0043035
Secondary Accession NumbersNone
Natural Product Identification
Common Namemelosuavine C
Provided ByJEOL DatabaseJEOL Logo
DescriptionCHEMBL3092729 belongs to the class of organic compounds known as melodinus alkaloids. These are alkaloids with a structure that is based on the melodinus skeleton. This backbone is a pentacyclic structure that contains a tetrahydroquinoline and an indolizine joined to each other through a cyclopentane. melosuavine C is found in Melodinus suaveolens. It was first documented in 2013 (Liu, Y. -P., et al.). Based on a literature review very few articles have been published on CHEMBL3092729.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC42H44N4O6
Average Mass700.8360 Da
Monoisotopic Mass700.32609 Da
IUPAC Namemethyl (1R,12R,19S)-4-[(1S,10S,12S,17R,19S)-12-ethenyl-10-(methoxycarbonyl)-9-oxo-8,16-diazapentacyclo[10.6.1.0^{1,10}.0^{2,7}.0^{16,19}]nonadeca-2(7),3,5,13-tetraen-17-yl]-12-ethyl-5-hydroxy-8,16-diazapentacyclo[10.6.1.0^{1,9}.0^{2,7}.0^{16,19}]nonadeca-2,4,6,9,13-pentaene-10-carboxylate
Traditional Namemethyl (1R,12R,19S)-4-[(1S,10S,12S,17R,19S)-12-ethenyl-10-(methoxycarbonyl)-9-oxo-8,16-diazapentacyclo[10.6.1.0^{1,10}.0^{2,7}.0^{16,19}]nonadeca-2(7),3,5,13-tetraen-17-yl]-12-ethyl-5-hydroxy-8,16-diazapentacyclo[10.6.1.0^{1,9}.0^{2,7}.0^{16,19}]nonadeca-2,4,6,9,13-pentaene-10-carboxylate
CAS Registry NumberNot Available
SMILES
[H]OC1=C(C([H])=C2C(N([H])C3=C(C(=O)OC([H])([H])[H])C([H])([H])[C@@]4(C([H])=C([H])C([H])([H])N5C([H])([H])C([H])([H])[C@]23[C@]45[H])C([H])([H])C([H])([H])[H])=C1[H])[C@]1([H])N2C([H])([H])C([H])=C([H])[C@@]3(C([H])=C([H])[H])C([H])([H])[C@@]4(C(=O)OC([H])([H])[H])C(=O)N([H])C5=C(C([H])=C([H])C([H])=C5[H])[C@]4(C1([H])[H])[C@@]23[H]
InChI Identifier
InChI=1S/C42H44N4O6/c1-5-38-13-9-16-45-18-15-40(34(38)45)27-19-24(31(47)20-29(27)43-32(40)25(21-38)33(48)51-3)30-22-41-26-11-7-8-12-28(26)44-36(49)42(41,37(50)52-4)23-39(6-2)14-10-17-46(30)35(39)41/h6-14,19-20,30,34-35,43,47H,2,5,15-18,21-23H2,1,3-4H3,(H,44,49)/t30-,34+,35+,38+,39+,40+,41-,42+/m1/s1
InChI KeyWWPFJILTZSGXBH-UKBNPBOMSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 600 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 500 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Melodinus suaveolensJEOL database
    • Liu, Y. -P., et al, J. Nat. Prod. 76, 2322 (2013)
Chemical Taxonomy
Description Belongs to the class of organic compounds known as melodinus alkaloids. These are alkaloids with a structure that is based on the melodinus skeleton. This backbone is a pentacyclic structure that contains a tetrahydroquinoline and an indolizine joined to each other through a cyclopentane.
KingdomOrganic compounds
Super ClassAlkaloids and derivatives
ClassMelodinus alkaloids
Sub ClassNot Available
Direct ParentMelodinus alkaloids
Alternative Parents
Substituents
  • Melodinus skeleton
  • Plumeran-type alkaloid
  • Carbazole
  • Tetrahydroquinolone
  • 2-phenylpyrrolidine
  • Quinolone
  • Tetrahydroquinoline
  • Indole or derivatives
  • Dihydroindole
  • 1-hydroxy-2-unsubstituted benzenoid
  • Aralkylamine
  • Phenol
  • Secondary aliphatic/aromatic amine
  • Dicarboxylic acid or derivatives
  • Benzenoid
  • N-alkylpyrrolidine
  • Vinylogous amide
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Pyrrole
  • Pyrrolidine
  • Methyl ester
  • Tertiary amine
  • Secondary carboxylic acid amide
  • Amino acid or derivatives
  • Tertiary aliphatic amine
  • Carboxamide group
  • Lactam
  • Carboxylic acid ester
  • Secondary amine
  • Organoheterocyclic compound
  • Azacycle
  • Carboxylic acid derivative
  • Enamine
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Carbonyl group
  • Organonitrogen compound
  • Organooxygen compound
  • Amine
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.65ALOGPS
logP3.11ChemAxon
logS-4.6ALOGPS
pKa (Strongest Acidic)8.23ChemAxon
pKa (Strongest Basic)9.8ChemAxon
Physiological Charge2ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area120.44 ŲChemAxon
Rotatable Bond Count7ChemAxon
Refractivity201.88 m³·mol⁻¹ChemAxon
Polarizability74.97 ųChemAxon
Number of Rings10ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID31130295
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound76309964
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Liu, Y. -P., et al. (2013). Liu, Y. -P., et al, J. Nat. Prod. 76, 2322 (2013). J. Nat. Prod..