NP-MRD: Showing NP-Card for salpichrolide U (NP0043000)

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Record Information

Version

2.0

Created at

2021-06-21 00:31:07 UTC

Updated at

2021-06-30 00:18:26 UTC

NP-MRD ID

NP0043000

Secondary Accession Numbers

None

Natural Product Identification

Common Name

salpichrolide U

Provided By

JEOL Database JEOL Logo

Description

salpichrolide U is found in S. origanifolia and S. tristis var. lehmannii. It was first documented in 2013 (Nicotra, V. E., et al.).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306212102313D          

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M  END

     RDKit          3D

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M  END


  Mrv1652306212102313D          

 59 63  0  0  0  0            999 V2000
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    1.6945   -5.0024   -6.8913 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0582   -4.5497   -5.2922 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6177   -1.9532   -4.9621 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8333   -1.9049   -4.8330 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4120   -0.3979   -6.9975 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2915   -0.7989   -7.4544 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1749    0.5432   -4.9538 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0090    2.3770   -6.1082 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4161    2.8768   -5.1638 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6390    2.1291   -6.7521 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5970    1.0635   -4.7130 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7759    1.0241   -2.5712 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1326    0.3559   -2.6769 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4796   -0.8512   -0.1841 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1200    0.7979   -0.1878 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4412    1.5914    1.2824 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0175    0.0824    1.9605 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.6940    0.1145   -0.2331 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9809    2.4445   -0.3319 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3216    2.8142    0.0733 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2908    3.0853    1.8761 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9939    2.4358    4.4819 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9658    1.0170    4.1187 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3893    0.8761    6.2596 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2762   -0.8432    5.7209 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5254   -1.2241    3.1706 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7799   -0.5626    1.5633 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7383   -1.9828    1.7956 H   0  0  0  0  0  0  0  0  0  0  0  0
 25 26  1  0  0  0  0
 13 12  1  0  0  0  0
 24 23  1  0  0  0  0
 12 11  2  0  0  0  0
 28 17  1  0  0  0  0
 11 10  1  0  0  0  0
 22 20  1  0  0  0  0
 10  9  2  0  0  0  0
 20 19  1  0  0  0  0
  9 14  1  0  0  0  0
 14 13  2  0  0  0  0
 19 18  1  0  0  0  0
  9  7  1  0  0  0  0
 17 18  1  0  0  0  0
  7  5  1  0  0  0  0
  5  6  1  0  0  0  0
 23 22  1  0  0  0  0
 28 26  1  0  0  0  0
 28 22  1  0  0  0  0
  5  4  1  0  0  0  0
  2  4  1  0  0  0  0
 26 27  2  0  0  0  0
 22 21  1  1  0  0  0
 20 21  1  0  0  0  0
 17 16  1  0  0  0  0
  7  8  1  0  0  0  0
 18 12  1  0  0  0  0
  5 35  1  6  0  0  0
 13 15  1  0  0  0  0
  2  1  1  0  0  0  0
 15 16  1  0  0  0  0
 28 29  1  6  0  0  0
 25 24  2  0  0  0  0
  2  3  2  0  0  0  0
 25 56  1  0  0  0  0
 24 55  1  0  0  0  0
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 23 54  1  0  0  0  0
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 19 50  1  0  0  0  0
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 17 48  1  6  0  0  0
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 15 44  1  0  0  0  0
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 11 42  1  0  0  0  0
 10 41  1  0  0  0  0
 14 43  1  0  0  0  0
  7 37  1  1  0  0  0
  6 36  1  0  0  0  0
  4 33  1  0  0  0  0
  4 34  1  0  0  0  0
  8 38  1  0  0  0  0
  8 39  1  0  0  0  0
  8 40  1  0  0  0  0
  1 30  1  0  0  0  0
  1 31  1  0  0  0  0
  1 32  1  0  0  0  0
 29 57  1  0  0  0  0
 29 58  1  0  0  0  0
 29 59  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0043000

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@]([H])(C([H])([H])C(=O)C([H])([H])[H])[C@]([H])(C1=C([H])C([H])=C2C(=C1[H])C([H])([H])C([H])([H])[C@]1([H])[C@@]2([H])C([H])([H])[C@]2([H])O[C@@]22C([H])([H])C([H])=C([H])C(=O)[C@]12C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C25H30O4/c1-14(26)11-21(27)15(2)16-6-8-18-17(12-16)7-9-20-19(18)13-23-25(29-23)10-4-5-22(28)24(20,25)3/h4-6,8,12,15,19-21,23,27H,7,9-11,13H2,1-3H3/t15-,19-,20+,21+,23-,24-,25-/m0/s1

> <INCHI_KEY>
AUIHFZLFRCLGQE-JKKFPWJFSA-N

> <FORMULA>
C25H30O4

> <MOLECULAR_WEIGHT>
394.511

> <EXACT_MASS>
394.214409446

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
59

> <JCHEM_AVERAGE_POLARIZABILITY>
44.5349059733356

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,2R,7R,9S,11R)-15-[(2S,3R)-3-hydroxy-5-oxohexan-2-yl]-2-methyl-8-oxapentacyclo[9.8.0.0^{2,7}.0^{7,9}.0^{12,17}]nonadeca-4,12,14,16-tetraen-3-one

> <ALOGPS_LOGP>
4.32

> <JCHEM_LOGP>
3.9731596120000003

> <ALOGPS_LOGS>
-5.30

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.960822329795523

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.35694938578877

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9336649658727536

> <JCHEM_POLAR_SURFACE_AREA>
66.9

> <JCHEM_REFRACTIVITY>
112.22309999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.96e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2R,7R,9S,11R)-15-[(2S,3R)-3-hydroxy-5-oxohexan-2-yl]-2-methyl-8-oxapentacyclo[9.8.0.0^{2,7}.0^{7,9}.0^{12,17}]nonadeca-4,12,14,16-tetraen-3-one

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 59 63  0  0  0  0  0  0  0  0999 V2000
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    0.8185   -1.6532    3.3616 O   0  0  0  0  0  0  0  0  0  0  0  0
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    2.4161    2.8768   -5.1638 H   0  0  0  0  0  0  0  0  0  0  0  0
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 13 12  1  0
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 10  9  2  0
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 28 22  1  0
  5  4  1  0
  2  4  1  0
 26 27  2  0
 22 21  1  1
 20 21  1  0
 17 16  1  0
  7  8  1  0
 18 12  1  0
  5 35  1  6
 13 15  1  0
  2  1  1  0
 15 16  1  0
 28 29  1  6
 25 24  2  0
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 25 56  1  0
 24 55  1  0
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 23 54  1  0
 20 52  1  6
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 10 41  1  0
 14 43  1  0
  7 37  1  1
  6 36  1  0
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  8 39  1  0
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  1 30  1  0
  1 31  1  0
  1 32  1  0
 29 57  1  0
 29 58  1  0
 29 59  1  0
M  END

HEADER    PROTEIN                                 21-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   21-JUN-21         0                                  
HETATM    1  C   UNK     0       1.797  -4.301  -6.058  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.564  -2.896  -6.546  0.00  0.00           C+0
HETATM    3  O   UNK     0       1.254  -2.668  -7.716  0.00  0.00           O+0
HETATM    4  C   UNK     0       1.685  -1.793  -5.513  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.694  -0.407  -6.167  0.00  0.00           C+0
HETATM    6  O   UNK     0       0.413  -0.134  -6.744  0.00  0.00           O+0
HETATM    7  C   UNK     0       2.114   0.719  -5.181  0.00  0.00           C+0
HETATM    8  C   UNK     0       2.034   2.103  -5.839  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.359   0.713  -3.858  0.00  0.00           C+0
HETATM   10  C   UNK     0      -0.026   0.901  -3.801  0.00  0.00           C+0
HETATM   11  C   UNK     0      -0.698   0.877  -2.578  0.00  0.00           C+0
HETATM   12  C   UNK     0      -0.002   0.667  -1.378  0.00  0.00           C+0
HETATM   13  C   UNK     0       1.391   0.488  -1.418  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.054   0.507  -2.657  0.00  0.00           C+0
HETATM   15  C   UNK     0       2.195   0.209  -0.171  0.00  0.00           C+0
HETATM   16  C   UNK     0       1.447   0.508   1.130  0.00  0.00           C+0
HETATM   17  C   UNK     0       0.016  -0.065   1.059  0.00  0.00           C+0
HETATM   18  C   UNK     0      -0.766   0.675  -0.061  0.00  0.00           C+0
HETATM   19  C   UNK     0      -1.145   2.125   0.305  0.00  0.00           C+0
HETATM   20  C   UNK     0      -1.537   2.322   1.737  0.00  0.00           C+0
HETATM   21  O   UNK     0      -0.384   2.381   2.596  0.00  0.00           O+0
HETATM   22  C   UNK     0      -1.284   1.288   2.813  0.00  0.00           C+0
HETATM   23  C   UNK     0      -1.935   1.386   4.169  0.00  0.00           C+0
HETATM   24  C   UNK     0      -1.186   0.621   5.223  0.00  0.00           C+0
HETATM   25  C   UNK     0      -0.270  -0.319   4.946  0.00  0.00           C+0
HETATM   26  C   UNK     0       0.017  -0.737   3.543  0.00  0.00           C+0
HETATM   27  O   UNK     0       0.819  -1.653   3.362  0.00  0.00           O+0
HETATM   28  C   UNK     0      -0.788  -0.088   2.402  0.00  0.00           C+0
HETATM   29  C   UNK     0      -2.026  -1.013   2.217  0.00  0.00           C+0
HETATM   30  H   UNK     0       2.807  -4.385  -5.650  0.00  0.00           H+0
HETATM   31  H   UNK     0       1.694  -5.002  -6.891  0.00  0.00           H+0
HETATM   32  H   UNK     0       1.058  -4.550  -5.292  0.00  0.00           H+0
HETATM   33  H   UNK     0       2.618  -1.953  -4.962  0.00  0.00           H+0
HETATM   34  H   UNK     0       0.833  -1.905  -4.833  0.00  0.00           H+0
HETATM   35  H   UNK     0       2.412  -0.398  -6.997  0.00  0.00           H+0
HETATM   36  H   UNK     0       0.292  -0.799  -7.454  0.00  0.00           H+0
HETATM   37  H   UNK     0       3.175   0.543  -4.954  0.00  0.00           H+0
HETATM   38  H   UNK     0       1.009   2.377  -6.108  0.00  0.00           H+0
HETATM   39  H   UNK     0       2.416   2.877  -5.164  0.00  0.00           H+0
HETATM   40  H   UNK     0       2.639   2.129  -6.752  0.00  0.00           H+0
HETATM   41  H   UNK     0      -0.597   1.063  -4.713  0.00  0.00           H+0
HETATM   42  H   UNK     0      -1.776   1.024  -2.571  0.00  0.00           H+0
HETATM   43  H   UNK     0       3.133   0.356  -2.677  0.00  0.00           H+0
HETATM   44  H   UNK     0       2.480  -0.851  -0.184  0.00  0.00           H+0
HETATM   45  H   UNK     0       3.120   0.798  -0.188  0.00  0.00           H+0
HETATM   46  H   UNK     0       1.441   1.591   1.282  0.00  0.00           H+0
HETATM   47  H   UNK     0       2.018   0.082   1.960  0.00  0.00           H+0
HETATM   48  H   UNK     0       0.134  -1.115   0.746  0.00  0.00           H+0
HETATM   49  H   UNK     0      -1.694   0.115  -0.233  0.00  0.00           H+0
HETATM   50  H   UNK     0      -1.981   2.445  -0.332  0.00  0.00           H+0
HETATM   51  H   UNK     0      -0.322   2.814   0.073  0.00  0.00           H+0
HETATM   52  H   UNK     0      -2.291   3.085   1.876  0.00  0.00           H+0
HETATM   53  H   UNK     0      -1.994   2.436   4.482  0.00  0.00           H+0
HETATM   54  H   UNK     0      -2.966   1.017   4.119  0.00  0.00           H+0
HETATM   55  H   UNK     0      -1.389   0.876   6.260  0.00  0.00           H+0
HETATM   56  H   UNK     0       0.276  -0.843   5.721  0.00  0.00           H+0
HETATM   57  H   UNK     0      -2.525  -1.224   3.171  0.00  0.00           H+0
HETATM   58  H   UNK     0      -2.780  -0.563   1.563  0.00  0.00           H+0
HETATM   59  H   UNK     0      -1.738  -1.983   1.796  0.00  0.00           H+0
CONECT    1    2   30   31   32                                             
CONECT    2    4    1    3                                                  
CONECT    3    2                                                            
CONECT    4    5    2   33   34                                             
CONECT    5    7    6    4   35                                             
CONECT    6    5   36                                                       
CONECT    7    9    5    8   37                                             
CONECT    8    7   38   39   40                                             
CONECT    9   10   14    7                                                  
CONECT   10   11    9   41                                                  
CONECT   11   12   10   42                                                  
CONECT   12   13   11   18                                                  
CONECT   13   12   14   15                                                  
CONECT   14    9   13   43                                                  
CONECT   15   13   16   44   45                                             
CONECT   16   17   15   46   47                                             
CONECT   17   28   18   16   48                                             
CONECT   18   19   17   12   49                                             
CONECT   19   20   18   50   51                                             
CONECT   20   22   19   21   52                                             
CONECT   21   22   20                                                       
CONECT   22   20   23   28   21                                             
CONECT   23   24   22   53   54                                             
CONECT   24   23   25   55                                                  
CONECT   25   26   24   56                                                  
CONECT   26   25   28   27                                                  
CONECT   27   26                                                            
CONECT   28   17   26   22   29                                             
CONECT   29   28   57   58   59                                             
CONECT   30    1                                                            
CONECT   31    1                                                            
CONECT   32    1                                                            
CONECT   33    4                                                            
CONECT   34    4                                                            
CONECT   35    5                                                            
CONECT   36    6                                                            
CONECT   37    7                                                            
CONECT   38    8                                                            
CONECT   39    8                                                            
CONECT   40    8                                                            
CONECT   41   10                                                            
CONECT   42   11                                                            
CONECT   43   14                                                            
CONECT   44   15                                                            
CONECT   45   15                                                            
CONECT   46   16                                                            
CONECT   47   16                                                            
CONECT   48   17                                                            
CONECT   49   18                                                            
CONECT   50   19                                                            
CONECT   51   19                                                            
CONECT   52   20                                                            
CONECT   53   23                                                            
CONECT   54   23                                                            
CONECT   55   24                                                            
CONECT   56   25                                                            
CONECT   57   29                                                            
CONECT   58   29                                                            
CONECT   59   29                                                            
MASTER        0    0    0    0    0    0    0    0   59    0  126    0
END

RDKit          3D

59 63  0  0  0  0  0  0  0  0999 V2000
    1.7967   -4.3013   -6.0583 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5636   -2.8958   -6.5460 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2536   -2.6677   -7.7163 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6846   -1.7932   -5.5131 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6938   -0.4069   -6.1668 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.4127   -0.1342   -6.7444 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1136    0.7188   -5.1809 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.0345    2.1025   -5.8391 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3588    0.7127   -3.8582 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0260    0.9009   -3.8007 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6982    0.8766   -2.5780 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0024    0.6667   -1.3779 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3906    0.4875   -1.4180 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0545    0.5067   -2.6567 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1951    0.2087   -0.1714 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4470    0.5082    1.1297 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0163   -0.0651    1.0593 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.7655    0.6745   -0.0611 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.1453    2.1254    0.3045 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5367    2.3225    1.7367 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3842    2.3814    2.5960 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2836    1.2880    2.8131 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.9351    1.3856    4.1692 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1855    0.6211    5.2229 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2701   -0.3186    4.9456 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0174   -0.7365    3.5425 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8185   -1.6532    3.3616 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7884   -0.0882    2.4020 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.0263   -1.0129    2.2175 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8070   -4.3852   -5.6504 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6945   -5.0024   -6.8913 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0582   -4.5497   -5.2922 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6177   -1.9532   -4.9621 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8333   -1.9049   -4.8330 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4120   -0.3979   -6.9975 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2915   -0.7989   -7.4544 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1749    0.5432   -4.9538 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0090    2.3770   -6.1082 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4161    2.8768   -5.1638 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6390    2.1291   -6.7521 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5970    1.0635   -4.7130 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7759    1.0241   -2.5712 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1326    0.3559   -2.6769 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4796   -0.8512   -0.1841 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1200    0.7979   -0.1878 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4412    1.5914    1.2824 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0175    0.0824    1.9605 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1338   -1.1148    0.7458 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6940    0.1145   -0.2331 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9809    2.4445   -0.3319 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3216    2.8142    0.0733 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2908    3.0853    1.8761 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9939    2.4358    4.4819 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9658    1.0170    4.1187 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3893    0.8761    6.2596 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2762   -0.8432    5.7209 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5254   -1.2241    3.1706 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7799   -0.5626    1.5633 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7383   -1.9828    1.7956 H   0  0  0  0  0  0  0  0  0  0  0  0
 25 26  1  0
 13 12  1  0
 24 23  1  0
 12 11  2  0
 28 17  1  0
 11 10  1  0
 22 20  1  0
 10  9  2  0
 20 19  1  0
  9 14  1  0
 14 13  2  0
 19 18  1  0
  9  7  1  0
 17 18  1  0
  7  5  1  0
  5  6  1  0
 23 22  1  0
 28 26  1  0
 28 22  1  0
  5  4  1  0
  2  4  1  0
 26 27  2  0
 22 21  1  1
 20 21  1  0
 17 16  1  0
  7  8  1  0
 18 12  1  0
  5 35  1  6
 13 15  1  0
  2  1  1  0
 15 16  1  0
 28 29  1  6
 25 24  2  0
  2  3  2  0
 25 56  1  0
 24 55  1  0
 23 53  1  0
 23 54  1  0
 20 52  1  6
 19 50  1  0
 19 51  1  0
 17 48  1  6
 18 49  1  6
 15 44  1  0
 15 45  1  0
 16 46  1  0
 16 47  1  0
 11 42  1  0
 10 41  1  0
 14 43  1  0
  7 37  1  1
  6 36  1  0
  4 33  1  0
  4 34  1  0
  8 38  1  0
  8 39  1  0
  8 40  1  0
  1 30  1  0
  1 31  1  0
  1 32  1  0
 29 57  1  0
 29 58  1  0
 29 59  1  0
M  END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₅H₃₀O₄

Average Mass

394.5110 Da

Monoisotopic Mass

394.21441 Da

IUPAC Name

(1R,2R,7R,9S,11R)-15-[(2S,3R)-3-hydroxy-5-oxohexan-2-yl]-2-methyl-8-oxapentacyclo[9.8.0.0^{2,7}.0^{7,9}.0^{12,17}]nonadeca-4,12,14,16-tetraen-3-one

Traditional Name

(1R,2R,7R,9S,11R)-15-[(2S,3R)-3-hydroxy-5-oxohexan-2-yl]-2-methyl-8-oxapentacyclo[9.8.0.0^{2,7}.0^{7,9}.0^{12,17}]nonadeca-4,12,14,16-tetraen-3-one

CAS Registry Number

Not Available

SMILES

[H]O[C@]([H])(C([H])([H])C(=O)C([H])([H])[H])[C@]([H])(C1=C([H])C([H])=C2C(=C1[H])C([H])([H])C([H])([H])[C@]1([H])[C@@]2([H])C([H])([H])[C@]2([H])O[C@@]22C([H])([H])C([H])=C([H])C(=O)[C@]12C([H])([H])[H])C([H])([H])[H]

InChI Identifier

InChI=1S/C25H30O4/c1-14(26)11-21(27)15(2)16-6-8-18-17(12-16)7-9-20-19(18)13-23-25(29-23)10-4-5-22(28)24(20,25)3/h4-6,8,12,15,19-21,23,27H,7,9-11,13H2,1-3H3/t15-,19-,20+,21+,23-,24-,25-/m0/s1

InChI Key

AUIHFZLFRCLGQE-JKKFPWJFSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Salpichroa origanifolia	JEOL database	Nicotra, V. E., et al, J. Nat. Prod. 76, 2219 (2013)
Spinus tristis var. lehmannii	JEOL database	Nicotra, V. E., et al, J. Nat. Prod. 76, 2219 (2013)

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.32	ALOGPS
logP	3.97	ChemAxon
logS	-5.3	ALOGPS
pKa (Strongest Acidic)	14.36	ChemAxon
pKa (Strongest Basic)	-2.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	66.9 Å²	ChemAxon
Rotatable Bond Count	4	ChemAxon
Refractivity	112.22 m³·mol⁻¹	ChemAxon
Polarizability	44.53 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

Not Available

References

General References

Nicotra, V. E., et al. (2013). Nicotra, V. E., et al, J. Nat. Prod. 76, 2219 (2013). J. Nat. Prod..

Showing NP-Card for salpichrolide U (NP0043000)

MOL for NP0043000 (salpichrolide U)

3D MOL for NP0043000 (salpichrolide U)

3D SDF for NP0043000 (salpichrolide U)

3D-SDF for NP0043000 (salpichrolide U)

PDB for NP0043000 (salpichrolide U)

3D PDB for NP0043000 (salpichrolide U)

SMILES for NP0043000 (salpichrolide U)

INCHI for NP0043000 (salpichrolide U)

Structure for NP0043000 (salpichrolide U)

3D Structure for NP0043000 (salpichrolide U)