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Record Information
Version2.0
Created at2021-06-21 00:30:26 UTC
Updated at2021-06-30 00:18:24 UTC
NP-MRD IDNP0042983
Secondary Accession NumbersNone
Natural Product Identification
Common Namegelsenicine
Provided ByJEOL DatabaseJEOL Logo
DescriptionGELSENICINE, also known as humantenmine, belongs to the class of organic compounds known as indoles and derivatives. These are organic compounds containing an indole, which is a bicyclic ring system made up of a six-membered benzene ring fused to a five-membered nitrogen-containing pyrrole ring. gelsenicine is found in Gelsemium elegans and Gelsemium sempervirens. It was first documented in 2018 (PMID: 30405933). Based on a literature review a significant number of articles have been published on GELSENICINE (PMID: 32453886) (PMID: 32335100) (PMID: 31430640) (PMID: 31085395).
Structure
Thumb
Synonyms
ValueSource
HumantenmineMeSH
Chemical FormulaC19H22N2O3
Average Mass326.3960 Da
Monoisotopic Mass326.16304 Da
IUPAC Name(1'R,3S,4'S,7'R,8'S)-6'-ethyl-1-methoxy-1,2-dihydro-10'-oxa-5'-azaspiro[indole-3,2'-tricyclo[5.3.1.0^{4,8}]undecan]-5'-en-2-one
Traditional Name(1'R,3S,4'S,7'R,8'S)-6'-ethyl-1-methoxy-10'-oxa-5'-azaspiro[indole-3,2'-tricyclo[5.3.1.0^{4,8}]undecan]-5'-en-2-one
CAS Registry NumberNot Available
SMILES
[H]C1=C([H])C2=C(C([H])=C1[H])[C@@]1(C(=O)N2OC([H])([H])[H])C([H])([H])[C@]2([H])N=C(C([H])([H])C([H])([H])[H])[C@]3([H])C([H])([H])[C@@]1([H])OC([H])([H])[C@]23[H]
InChI Identifier
InChI=1S/C19H22N2O3/c1-3-14-11-8-17-19(9-15(20-14)12(11)10-24-17)13-6-4-5-7-16(13)21(23-2)18(19)22/h4-7,11-12,15,17H,3,8-10H2,1-2H3/t11-,12+,15+,17-,19+/m1/s1
InChI KeyBIGABVPVCRHEES-NWPJSNQLSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 500 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 600 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Gelsemium elegansJEOL database
    • Qu, J., et al, J. Nat. Prod. 76, 2203 (2013)
Gelsemium sempervirensLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as indoles and derivatives. These are organic compounds containing an indole, which is a bicyclic ring system made up of a six-membered benzene ring fused to a five-membered nitrogen-containing pyrrole ring.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassIndoles and derivatives
Sub ClassNot Available
Direct ParentIndoles and derivatives
Alternative Parents
Substituents
  • Indole or derivatives
  • Oxepane
  • Oxane
  • Benzenoid
  • Pyrroline
  • Ketimine
  • Carboxylic acid derivative
  • Dialkyl ether
  • Ether
  • Oxacycle
  • Azacycle
  • Propargyl-type 1,3-dipolar organic compound
  • Organic 1,3-dipolar compound
  • Organonitrogen compound
  • Organic oxygen compound
  • Organooxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Carbonyl group
  • Imine
  • Organic nitrogen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.78ALOGPS
logP2.02ChemAxon
logS-3.6ALOGPS
pKa (Strongest Basic)6.13ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area51.13 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity88.82 m³·mol⁻¹ChemAxon
Polarizability34.82 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00025089
Chemspider ID19988490
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound21123652
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Wang ZY, Zuo MT, Zhao XJ, Li YJ, Sun ZL, Liu ZY: Comparative metabolism of gelsenicine in liver microsomes from humans, pigs, goats and rats. Rapid Commun Mass Spectrom. 2020 Sep 15;34(17):e8843. doi: 10.1002/rcm.8843. [PubMed:32453886 ]
  2. Cao JJ, Yang K, Yu H, Long XM, Li YJ, Sun ZL, Liu ZY: Comparative toxicokinetic profiles of multiple-components of Gelsemium elegans in pigs and rats after a single oral administration. Toxicon. 2020 Jul 15;181:28-35. doi: 10.1016/j.toxicon.2020.04.093. Epub 2020 Apr 23. [PubMed:32335100 ]
  3. Yang S, Liu Y, Sun F, Zhang J, Jin Y, Li Y, Zhou J, Li Y, Zhu K: Gelsedine-type alkaloids: Discovery of natural neurotoxins presented in toxic honey. J Hazard Mater. 2020 Jan 5;381:120999. doi: 10.1016/j.jhazmat.2019.120999. Epub 2019 Aug 12. [PubMed:31430640 ]
  4. Wang J, Zhang J, Zhang C, Sun X, Liao X, Zheng W, Yin Q, Yang J, Mao D, Wang B, Li Q, Chen X, Ding Q, Li J, Ma B: The qualitative and quantitative analyses of Gelsemium elegans. J Pharm Biomed Anal. 2019 Aug 5;172:329-338. doi: 10.1016/j.jpba.2019.05.015. Epub 2019 May 7. [PubMed:31085395 ]
  5. Shao L, Jin Y, Fu H, Ma J, Wang X, Jin Y, Wen C: Pharmacokinetics and UPLC-MS/MS of Delsoline in Mouse Whole Blood. J Anal Methods Chem. 2018 Oct 11;2018:9412708. doi: 10.1155/2018/9412708. eCollection 2018. [PubMed:30405933 ]
  6. Qu, J., et al. (2013). Qu, J., et al, J. Nat. Prod. 76, 2203 (2013). J. Nat. Prod..