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Record Information
Version1.0
Created at2021-06-21 00:21:09 UTC
Updated at2021-06-30 00:18:03 UTC
NP-MRD IDNP0042777
Secondary Accession NumbersNone
Natural Product Identification
Common Namexylarinonericin C
Provided ByJEOL DatabaseJEOL Logo
Description xylarinonericin C is found in Xylaria plebeja PSU-G30. It was first documented in 2013 (Rukachaisirikul, V., et al.).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC35H48O14
Average Mass692.7550 Da
Monoisotopic Mass692.30441 Da
IUPAC Name[(1R,2S,4R,5R,8R,9S,11R)-1-({[(1S,5S,6R)-5,6-dihydroxy-4-methoxy-6-methyl-2-oxocyclohex-3-en-1-yl]oxy}carbonyl)-9-formyl-5-methyl-13-(propan-2-yl)tetracyclo[7.4.0.0^{2,11}.0^{4,8}]tridec-12-en-2-yl]methyl (2S,3S,4S,5S,6R)-3,5,6-trihydroxy-4-methoxyoxane-2-carboxylate
Traditional Name[(1R,2S,4R,5R,8R,9S,11R)-1-({[(1S,5S,6R)-5,6-dihydroxy-4-methoxy-6-methyl-2-oxocyclohex-3-en-1-yl]oxy}carbonyl)-9-formyl-13-isopropyl-5-methyltetracyclo[7.4.0.0^{2,11}.0^{4,8}]tridec-12-en-2-yl]methyl (2S,3S,4S,5S,6R)-3,5,6-trihydroxy-4-methoxyoxane-2-carboxylate
CAS Registry NumberNot Available
SMILES
[H]O[C@]1([H])O[C@]([H])(C(=O)OC([H])([H])[C@@]23C([H])([H])[C@]4([H])[C@]([H])(C([H])([H])[H])C([H])([H])C([H])([H])[C@@]4([H])[C@@]4(C([H])=O)C([H])([H])[C@]2([H])C([H])=C(C([H])(C([H])([H])[H])C([H])([H])[H])[C@@]34C(=O)O[C@]2([H])C(=O)C([H])=C(OC([H])([H])[H])[C@@]([H])(O[H])[C@]2(O[H])C([H])([H])[H])[C@@]([H])(O[H])[C@]([H])(OC([H])([H])[H])[C@]1([H])O[H]
InChI Identifier
InChI=1S/C35H48O14/c1-15(2)20-9-17-11-33(13-36)19-8-7-16(3)18(19)12-34(17,14-47-30(42)26-23(38)25(46-6)24(39)29(41)48-26)35(20,33)31(43)49-28-21(37)10-22(45-5)27(40)32(28,4)44/h9-10,13,15-19,23-29,38-41,44H,7-8,11-12,14H2,1-6H3/t16-,17+,18-,19-,23+,24+,25+,26+,27-,28-,29-,32-,33+,34+,35+/m1/s1
InChI KeyKKMWWXUMXICVPD-NTZYXEBNSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 500 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 600 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Xylaria plebeja PSU-G30JEOL database
    • Rukachaisirikul, V., et. al, Tetrahedron 69, 10711 (2013)
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.21ALOGPS
logP-0.11ChemAxon
logS-3.6ALOGPS
pKa (Strongest Acidic)10.96ChemAxon
pKa (Strongest Basic)-3.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count12ChemAxon
Hydrogen Donor Count5ChemAxon
Polar Surface Area215.58 ŲChemAxon
Rotatable Bond Count11ChemAxon
Refractivity169.14 m³·mol⁻¹ChemAxon
Polarizability70.28 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
External LinksNot Available
References
General References
  1. Rukachaisirikul, V., et al. (2013). Rukachaisirikul, V., et. al, Tetrahedron 69, 10711 (2013). Tetrahedron.