NP-MRD: Showing NP-Card for 3beta-O-beta-D-glucopyranosyloxy-16beta,26,29-trihydroxy-5astigmasta-7,9(+ (NP0042706)

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Record Information

Version

2.0

Created at

2021-06-21 00:18:04 UTC

Updated at

2021-06-30 00:17:56 UTC

NP-MRD ID

NP0042706

Secondary Accession Numbers

None

Natural Product Identification

Common Name

3beta-O-beta-D-glucopyranosyloxy-16beta,26,29-trihydroxy-5astigmasta-7,9(+

Provided By

JEOL Database JEOL Logo

Description

3beta-O-beta-D-glucopyranosyloxy-16beta,26,29-trihydroxy-5astigmasta-7,9(+ is found in Vernonia nigritiana Oliv. & Hiern. 3beta-O-beta-D-glucopyranosyloxy-16beta,26,29-trihydroxy-5astigmasta-7,9(+ was first documented in 2013 (Vassallo, A., et al.).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306212102183D          

 99103  0  0  0  0            999 V2000
   -1.4848   -1.3807   -5.1973 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3439   -1.1612   -4.1991 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4933   -2.4475   -4.0470 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.6650   -2.2109   -3.2743 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8841   -0.6131   -2.8719 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6230   -1.3853   -2.0467 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1536   -1.0391   -0.6991 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.7514   -2.0814    0.1788 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5408    0.8378   -2.5829 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.9318    1.0301   -2.1952 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2510    2.4876   -1.7716 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.6799    2.8180   -2.2287 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9423    2.7231   -0.2576 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.9681    2.2526    0.8031 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.1201    1.6191    0.2970 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3353    3.4986    1.5983 C   0  0  1  0  0  0  0  0  0  0  0  0
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    0.5084    3.6209    3.9752 C   0  0  0  0  0  0  0  0  0  0  0  0
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    0.2997   -1.4950    1.9375 O   0  0  0  0  0  0  0  0  0  0  0  0
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    1.4959   -3.6341    2.2732 C   0  0  1  0  0  0  0  0  0  0  0  0
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   -2.3380    3.1912    3.5074 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.0080    4.4954    4.0123 C   0  0  0  0  0  0  0  0  0  0  0  0
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    0.0486    2.1161   -0.0497 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

     RDKit          3D

 99103  0  0  0  0  0  0  0  0999 V2000
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M  END


  Mrv1652306212102183D          

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 26 25  1  0  0  0  0
 32 82  1  0  0  0  0
 26 76  1  1  0  0  0
 31 81  1  6  0  0  0
 33 83  1  1  0  0  0
 34 84  1  0  0  0  0
 35 85  1  6  0  0  0
 36 86  1  0  0  0  0
 29 78  1  0  0  0  0
 29 79  1  0  0  0  0
 28 77  1  1  0  0  0
 30 80  1  0  0  0  0
 37 87  1  0  0  0  0
 37 88  1  0  0  0  0
 24 75  1  6  0  0  0
 23 73  1  0  0  0  0
 23 74  1  0  0  0  0
 38 89  1  0  0  0  0
 38 90  1  0  0  0  0
 22 72  1  1  0  0  0
 19 71  1  0  0  0  0
 42 94  1  0  0  0  0
 40 91  1  0  0  0  0
 40 92  1  0  0  0  0
 40 93  1  0  0  0  0
 43 95  1  0  0  0  0
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 17 70  1  1  0  0  0
 16 68  1  0  0  0  0
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  9 57  1  0  0  0  0
  9 58  1  0  0  0  0
  2 49  1  6  0  0  0
  6 53  1  0  0  0  0
  7 54  1  0  0  0  0
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  4 52  1  0  0  0  0
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  1 47  1  0  0  0  0
  1 48  1  0  0  0  0
 15 67  1  0  0  0  0
  8 56  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0042706

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC([H])([H])C(\[H])=C(/C([H])([H])C([H])([H])[C@]([H])(C([H])([H])[H])[C@@]1([H])[C@@]([H])(O[H])C([H])([H])[C@]2([H])C3=C([H])C(=O)[C@]4([H])C([H])([H])[C@@]([H])(O[C@]5([H])O[C@]([H])(C([H])([H])O[H])[C@@]([H])(O[H])[C@]([H])(O[H])[C@@]5([H])O[H])C([H])([H])C([H])([H])[C@@]4(C3=C([H])C([H])([H])[C@]12C([H])([H])[H])C([H])([H])[H])[C@]([H])(C([H])([H])[H])C([H])([H])O[H]

> <INCHI_IDENTIFIER>
InChI=1S/C35H54O10/c1-18(5-6-20(9-12-36)19(2)16-37)29-27(40)15-24-22-14-26(39)25-13-21(7-10-34(25,3)23(22)8-11-35(24,29)4)44-33-32(43)31(42)30(41)28(17-38)45-33/h8-9,14,18-19,21,24-25,27-33,36-38,40-43H,5-7,10-13,15-17H2,1-4H3/b20-9+/t18-,19+,21-,24+,25-,27-,28+,29-,30+,31-,32+,33+,34+,35-/m0/s1

> <INCHI_KEY>
HHGAYFAKQZKNBG-NHSZYHBWSA-N

> <FORMULA>
C35H54O10

> <MOLECULAR_WEIGHT>
634.807

> <EXACT_MASS>
634.371697939

> <JCHEM_ACCEPTOR_COUNT>
10

> <JCHEM_ATOM_COUNT>
99

> <JCHEM_AVERAGE_POLARIZABILITY>
68.24458034606971

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
7

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2S,5S,7R,11S,13S,14R,15S)-13-hydroxy-14-[(2S,5E)-7-hydroxy-5-[(2S)-1-hydroxypropan-2-yl]hept-5-en-2-yl]-2,15-dimethyl-5-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}tetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadeca-1(17),9-dien-8-one

> <ALOGPS_LOGP>
2.06

> <JCHEM_LOGP>
0.7507159463333313

> <ALOGPS_LOGS>
-3.70

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.199777354444777

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.210539502754392

> <JCHEM_PKA_STRONGEST_BASIC>
-0.5490813670667619

> <JCHEM_POLAR_SURFACE_AREA>
177.14

> <JCHEM_REFRACTIVITY>
169.7423

> <JCHEM_ROTATABLE_BOND_COUNT>
10

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.25e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2S,5S,7R,11S,13S,14R,15S)-13-hydroxy-14-[(2S,5E)-7-hydroxy-5-[(2S)-1-hydroxypropan-2-yl]hept-5-en-2-yl]-2,15-dimethyl-5-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}tetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadeca-1(17),9-dien-8-one

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 99103  0  0  0  0  0  0  0  0999 V2000
   -1.4848   -1.3807   -5.1973 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3439   -1.1612   -4.1991 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4933   -2.4475   -4.0470 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6650   -2.2109   -3.2743 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8841   -0.6131   -2.8719 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6230   -1.3853   -2.0467 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1536   -1.0391   -0.6991 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7514   -2.0814    0.1788 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5408    0.8378   -2.5829 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9318    1.0301   -2.1952 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2510    2.4876   -1.7716 C   0  0  2  0  0  0  0  0  0  0  0  0
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    0.9423    2.7231   -0.2576 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.9681    2.2526    0.8031 C   0  0  1  0  0  0  0  0  0  0  0  0
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    1.2508    5.3021   -0.6622 C   0  0  0  0  0  0  0  0  0  0  0  0
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 15 67  1  0
  8 56  1  0
M  END

HEADER    PROTEIN                                 21-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   21-JUN-21         0                                  
HETATM    1  C   UNK     0      -1.485  -1.381  -5.197  0.00  0.00           C+0
HETATM    2  C   UNK     0      -0.344  -1.161  -4.199  0.00  0.00           C+0
HETATM    3  C   UNK     0       0.493  -2.447  -4.047  0.00  0.00           C+0
HETATM    4  O   UNK     0       1.665  -2.211  -3.274  0.00  0.00           O+0
HETATM    5  C   UNK     0      -0.884  -0.613  -2.872  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.623  -1.385  -2.047  0.00  0.00           C+0
HETATM    7  C   UNK     0      -2.154  -1.039  -0.699  0.00  0.00           C+0
HETATM    8  O   UNK     0      -1.751  -2.081   0.179  0.00  0.00           O+0
HETATM    9  C   UNK     0      -0.541   0.838  -2.583  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.932   1.030  -2.195  0.00  0.00           C+0
HETATM   11  C   UNK     0       1.251   2.488  -1.772  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.680   2.818  -2.229  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.942   2.723  -0.258  0.00  0.00           C+0
HETATM   14  C   UNK     0       1.968   2.253   0.803  0.00  0.00           C+0
HETATM   15  O   UNK     0       3.120   1.619   0.297  0.00  0.00           O+0
HETATM   16  C   UNK     0       2.335   3.499   1.598  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.028   4.312   1.651  0.00  0.00           C+0
HETATM   18  C   UNK     0       0.056   3.802   2.723  0.00  0.00           C+0
HETATM   19  C   UNK     0       0.508   3.621   3.975  0.00  0.00           C+0
HETATM   20  C   UNK     0      -0.322   3.074   5.058  0.00  0.00           C+0
HETATM   21  O   UNK     0       0.139   3.030   6.197  0.00  0.00           O+0
HETATM   22  C   UNK     0      -1.667   2.483   4.718  0.00  0.00           C+0
HETATM   23  C   UNK     0      -1.534   0.952   4.593  0.00  0.00           C+0
HETATM   24  C   UNK     0      -1.618   0.441   3.155  0.00  0.00           C+0
HETATM   25  O   UNK     0      -1.619  -0.992   3.136  0.00  0.00           O+0
HETATM   26  C   UNK     0      -0.309  -1.578   3.218  0.00  0.00           C+0
HETATM   27  O   UNK     0       0.300  -1.495   1.938  0.00  0.00           O+0
HETATM   28  C   UNK     0       1.574  -2.157   1.853  0.00  0.00           C+0
HETATM   29  C   UNK     0       2.054  -2.023   0.400  0.00  0.00           C+0
HETATM   30  O   UNK     0       1.104  -2.572  -0.521  0.00  0.00           O+0
HETATM   31  C   UNK     0       1.496  -3.634   2.273  0.00  0.00           C+0
HETATM   32  O   UNK     0       2.809  -4.198   2.363  0.00  0.00           O+0
HETATM   33  C   UNK     0       0.823  -3.763   3.639  0.00  0.00           C+0
HETATM   34  O   UNK     0       0.642  -5.154   3.949  0.00  0.00           O+0
HETATM   35  C   UNK     0      -0.518  -3.043   3.639  0.00  0.00           C+0
HETATM   36  O   UNK     0      -1.094  -3.131   4.952  0.00  0.00           O+0
HETATM   37  C   UNK     0      -2.927   0.898   2.497  0.00  0.00           C+0
HETATM   38  C   UNK     0      -3.459   2.232   3.023  0.00  0.00           C+0
HETATM   39  C   UNK     0      -2.338   3.191   3.507  0.00  0.00           C+0
HETATM   40  C   UNK     0      -3.008   4.495   4.012  0.00  0.00           C+0
HETATM   41  C   UNK     0      -1.351   3.597   2.383  0.00  0.00           C+0
HETATM   42  C   UNK     0      -1.791   3.886   1.143  0.00  0.00           C+0
HETATM   43  C   UNK     0      -0.962   4.433   0.026  0.00  0.00           C+0
HETATM   44  C   UNK     0       0.552   4.200   0.170  0.00  0.00           C+0
HETATM   45  C   UNK     0       1.251   5.302  -0.662  0.00  0.00           C+0
HETATM   46  H   UNK     0      -2.161  -2.179  -4.873  0.00  0.00           H+0
HETATM   47  H   UNK     0      -1.088  -1.660  -6.179  0.00  0.00           H+0
HETATM   48  H   UNK     0      -2.075  -0.467  -5.327  0.00  0.00           H+0
HETATM   49  H   UNK     0       0.322  -0.403  -4.632  0.00  0.00           H+0
HETATM   50  H   UNK     0      -0.070  -3.271  -3.597  0.00  0.00           H+0
HETATM   51  H   UNK     0       0.828  -2.787  -5.034  0.00  0.00           H+0
HETATM   52  H   UNK     0       1.402  -2.278  -2.329  0.00  0.00           H+0
HETATM   53  H   UNK     0      -1.850  -2.407  -2.348  0.00  0.00           H+0
HETATM   54  H   UNK     0      -3.246  -0.990  -0.711  0.00  0.00           H+0
HETATM   55  H   UNK     0      -1.749  -0.103  -0.313  0.00  0.00           H+0
HETATM   56  H   UNK     0      -1.838  -1.718   1.081  0.00  0.00           H+0
HETATM   57  H   UNK     0      -1.191   1.251  -1.806  0.00  0.00           H+0
HETATM   58  H   UNK     0      -0.763   1.433  -3.479  0.00  0.00           H+0
HETATM   59  H   UNK     0       1.552   0.755  -3.058  0.00  0.00           H+0
HETATM   60  H   UNK     0       1.200   0.341  -1.389  0.00  0.00           H+0
HETATM   61  H   UNK     0       0.581   3.139  -2.348  0.00  0.00           H+0
HETATM   62  H   UNK     0       3.093   3.704  -1.750  0.00  0.00           H+0
HETATM   63  H   UNK     0       3.373   1.989  -2.055  0.00  0.00           H+0
HETATM   64  H   UNK     0       2.685   3.000  -3.310  0.00  0.00           H+0
HETATM   65  H   UNK     0       0.049   2.116  -0.050  0.00  0.00           H+0
HETATM   66  H   UNK     0       1.476   1.530   1.466  0.00  0.00           H+0
HETATM   67  H   UNK     0       3.739   1.473   1.032  0.00  0.00           H+0
HETATM   68  H   UNK     0       2.756   3.231   2.572  0.00  0.00           H+0
HETATM   69  H   UNK     0       3.129   4.057   1.087  0.00  0.00           H+0
HETATM   70  H   UNK     0       1.251   5.359   1.899  0.00  0.00           H+0
HETATM   71  H   UNK     0       1.525   3.854   4.272  0.00  0.00           H+0
HETATM   72  H   UNK     0      -2.287   2.667   5.609  0.00  0.00           H+0
HETATM   73  H   UNK     0      -0.615   0.596   5.073  0.00  0.00           H+0
HETATM   74  H   UNK     0      -2.343   0.480   5.169  0.00  0.00           H+0
HETATM   75  H   UNK     0      -0.771   0.812   2.566  0.00  0.00           H+0
HETATM   76  H   UNK     0       0.297  -1.050   3.963  0.00  0.00           H+0
HETATM   77  H   UNK     0       2.288  -1.624   2.494  0.00  0.00           H+0
HETATM   78  H   UNK     0       2.171  -0.968   0.146  0.00  0.00           H+0
HETATM   79  H   UNK     0       3.014  -2.521   0.241  0.00  0.00           H+0
HETATM   80  H   UNK     0       0.214  -2.294  -0.209  0.00  0.00           H+0
HETATM   81  H   UNK     0       0.935  -4.222   1.537  0.00  0.00           H+0
HETATM   82  H   UNK     0       2.674  -5.101   2.715  0.00  0.00           H+0
HETATM   83  H   UNK     0       1.475  -3.368   4.428  0.00  0.00           H+0
HETATM   84  H   UNK     0       0.051  -5.168   4.729  0.00  0.00           H+0
HETATM   85  H   UNK     0      -1.215  -3.548   2.958  0.00  0.00           H+0
HETATM   86  H   UNK     0      -1.917  -2.605   4.912  0.00  0.00           H+0
HETATM   87  H   UNK     0      -2.762   0.977   1.417  0.00  0.00           H+0
HETATM   88  H   UNK     0      -3.708   0.134   2.610  0.00  0.00           H+0
HETATM   89  H   UNK     0      -4.129   2.020   3.869  0.00  0.00           H+0
HETATM   90  H   UNK     0      -4.106   2.694   2.267  0.00  0.00           H+0
HETATM   91  H   UNK     0      -2.270   5.200   4.414  0.00  0.00           H+0
HETATM   92  H   UNK     0      -3.551   5.006   3.209  0.00  0.00           H+0
HETATM   93  H   UNK     0      -3.733   4.288   4.808  0.00  0.00           H+0
HETATM   94  H   UNK     0      -2.849   3.814   0.905  0.00  0.00           H+0
HETATM   95  H   UNK     0      -1.311   3.998  -0.919  0.00  0.00           H+0
HETATM   96  H   UNK     0      -1.187   5.506  -0.034  0.00  0.00           H+0
HETATM   97  H   UNK     0       0.957   6.297  -0.305  0.00  0.00           H+0
HETATM   98  H   UNK     0       2.339   5.265  -0.584  0.00  0.00           H+0
HETATM   99  H   UNK     0       0.975   5.255  -1.720  0.00  0.00           H+0
CONECT    1    2   46   47   48                                             
CONECT    2    5    3    1   49                                             
CONECT    3    2    4   50   51                                             
CONECT    4    3   52                                                       
CONECT    5    9    2    6                                                  
CONECT    6    5    7   53                                                  
CONECT    7    6    8   54   55                                             
CONECT    8    7   56                                                       
CONECT    9   10    5   57   58                                             
CONECT   10   11    9   59   60                                             
CONECT   11   13   10   12   61                                             
CONECT   12   11   62   63   64                                             
CONECT   13   44   14   11   65                                             
CONECT   14   16   13   15   66                                             
CONECT   15   14   67                                                       
CONECT   16   17   14   68   69                                             
CONECT   17   18   44   16   70                                             
CONECT   18   41   17   19                                                  
CONECT   19   20   18   71                                                  
CONECT   20   22   19   21                                                  
CONECT   21   20                                                            
CONECT   22   23   39   20   72                                             
CONECT   23   24   22   73   74                                             
CONECT   24   25   37   23   75                                             
CONECT   25   24   26                                                       
CONECT   26   35   27   25   76                                             
CONECT   27   28   26                                                       
CONECT   28   31   27   29   77                                             
CONECT   29   30   28   78   79                                             
CONECT   30   29   80                                                       
CONECT   31   33   28   32   81                                             
CONECT   32   31   82                                                       
CONECT   33   35   31   34   83                                             
CONECT   34   33   84                                                       
CONECT   35   26   33   36   85                                             
CONECT   36   35   86                                                       
CONECT   37   24   38   87   88                                             
CONECT   38   37   39   89   90                                             
CONECT   39   40   38   22   41                                             
CONECT   40   39   91   92   93                                             
CONECT   41   18   42   39                                                  
CONECT   42   43   41   94                                                  
CONECT   43   42   44   95   96                                             
CONECT   44   43   17   13   45                                             
CONECT   45   44   97   98   99                                             
CONECT   46    1                                                            
CONECT   47    1                                                            
CONECT   48    1                                                            
CONECT   49    2                                                            
CONECT   50    3                                                            
CONECT   51    3                                                            
CONECT   52    4                                                            
CONECT   53    6                                                            
CONECT   54    7                                                            
CONECT   55    7                                                            
CONECT   56    8                                                            
CONECT   57    9                                                            
CONECT   58    9                                                            
CONECT   59   10                                                            
CONECT   60   10                                                            
CONECT   61   11                                                            
CONECT   62   12                                                            
CONECT   63   12                                                            
CONECT   64   12                                                            
CONECT   65   13                                                            
CONECT   66   14                                                            
CONECT   67   15                                                            
CONECT   68   16                                                            
CONECT   69   16                                                            
CONECT   70   17                                                            
CONECT   71   19                                                            
CONECT   72   22                                                            
CONECT   73   23                                                            
CONECT   74   23                                                            
CONECT   75   24                                                            
CONECT   76   26                                                            
CONECT   77   28                                                            
CONECT   78   29                                                            
CONECT   79   29                                                            
CONECT   80   30                                                            
CONECT   81   31                                                            
CONECT   82   32                                                            
CONECT   83   33                                                            
CONECT   84   34                                                            
CONECT   85   35                                                            
CONECT   86   36                                                            
CONECT   87   37                                                            
CONECT   88   37                                                            
CONECT   89   38                                                            
CONECT   90   38                                                            
CONECT   91   40                                                            
CONECT   92   40                                                            
CONECT   93   40                                                            
CONECT   94   42                                                            
CONECT   95   43                                                            
CONECT   96   43                                                            
CONECT   97   45                                                            
CONECT   98   45                                                            
CONECT   99   45                                                            
MASTER        0    0    0    0    0    0    0    0   99    0  206    0
END

RDKit          3D

99103  0  0  0  0  0  0  0  0999 V2000
   -1.4848   -1.3807   -5.1973 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3439   -1.1612   -4.1991 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4933   -2.4475   -4.0470 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6650   -2.2109   -3.2743 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8841   -0.6131   -2.8719 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6230   -1.3853   -2.0467 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1536   -1.0391   -0.6991 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7514   -2.0814    0.1788 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5408    0.8378   -2.5829 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9318    1.0301   -2.1952 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2510    2.4876   -1.7716 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.6799    2.8180   -2.2287 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9423    2.7231   -0.2576 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.9681    2.2526    0.8031 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.1201    1.6191    0.2970 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3353    3.4986    1.5983 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0275    4.3123    1.6505 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0561    3.8020    2.7233 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5084    3.6209    3.9752 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3224    3.0740    5.0582 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1389    3.0299    6.1972 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6674    2.4828    4.7180 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.5338    0.9518    4.5930 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6183    0.4410    3.1548 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.6185   -0.9924    3.1365 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3092   -1.5781    3.2183 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.2997   -1.4950    1.9375 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5743   -2.1573    1.8529 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.0535   -2.0232    0.3996 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1041   -2.5718   -0.5206 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4959   -3.6341    2.2732 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8088   -4.1977    2.3634 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8225   -3.7628    3.6390 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.6419   -5.1537    3.9487 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5183   -3.0426    3.6385 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0944   -3.1309    4.9518 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9273    0.8978    2.4966 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4591    2.2325    3.0227 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3380    3.1912    3.5074 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.0080    4.4954    4.0123 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3513    3.5969    2.3831 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7907    3.8860    1.1433 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9619    4.4330    0.0258 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5522    4.2001    0.1695 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2508    5.3021   -0.6622 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1612   -2.1789   -4.8726 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0879   -1.6604   -6.1793 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0754   -0.4670   -5.3266 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3220   -0.4033   -4.6321 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0704   -3.2714   -3.5966 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8276   -2.7869   -5.0335 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4023   -2.2782   -2.3289 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8501   -2.4069   -2.3482 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2457   -0.9899   -0.7111 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7491   -0.1027   -0.3131 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8383   -1.7175    1.0812 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1907    1.2511   -1.8062 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7629    1.4329   -3.4786 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5515    0.7551   -3.0578 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2005    0.3407   -1.3895 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5812    3.1391   -2.3475 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0934    3.7044   -1.7499 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3735    1.9894   -2.0548 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6853    3.0002   -3.3100 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0486    2.1161   -0.0497 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4762    1.5299    1.4665 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7391    1.4727    1.0320 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7555    3.2314    2.5723 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1289    4.0573    1.0874 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2514    5.3587    1.8992 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5251    3.8538    4.2722 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2874    2.6672    5.6085 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6150    0.5964    5.0734 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3428    0.4804    5.1694 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7711    0.8117    2.5664 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2968   -1.0500    3.9633 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2883   -1.6236    2.4936 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1710   -0.9675    0.1459 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0144   -2.5213    0.2412 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2135   -2.2940   -0.2091 H   0  0  0  0  0  0  0  0  0  0  0  0
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    1.4748   -3.3677    4.4280 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₅H₅₄O₁₀

Average Mass

634.8070 Da

Monoisotopic Mass

634.37170 Da

IUPAC Name

(2S,5S,7R,11S,13S,14R,15S)-13-hydroxy-14-[(2S,5E)-7-hydroxy-5-[(2S)-1-hydroxypropan-2-yl]hept-5-en-2-yl]-2,15-dimethyl-5-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}tetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadeca-1(17),9-dien-8-one

Traditional Name

CAS Registry Number

Not Available

SMILES

[H]OC([H])([H])C(\[H])=C(/C([H])([H])C([H])([H])[C@]([H])(C([H])([H])[H])[C@@]1([H])[C@@]([H])(O[H])C([H])([H])[C@]2([H])C3=C([H])C(=O)[C@]4([H])C([H])([H])[C@@]([H])(O[C@]5([H])O[C@]([H])(C([H])([H])O[H])[C@@]([H])(O[H])[C@]([H])(O[H])[C@@]5([H])O[H])C([H])([H])C([H])([H])[C@@]4(C3=C([H])C([H])([H])[C@]12C([H])([H])[H])C([H])([H])[H])[C@]([H])(C([H])([H])[H])C([H])([H])O[H]

InChI Identifier

InChI=1S/C35H54O10/c1-18(5-6-20(9-12-36)19(2)16-37)29-27(40)15-24-22-14-26(39)25-13-21(7-10-34(25,3)23(22)8-11-35(24,29)4)44-33-32(43)31(42)30(41)28(17-38)45-33/h8-9,14,18-19,21,24-25,27-33,36-38,40-43H,5-7,10-13,15-17H2,1-4H3/b20-9+/t18-,19+,21-,24+,25-,27-,28+,29-,30+,31-,32+,33+,34+,35-/m0/s1

InChI Key

HHGAYFAKQZKNBG-NHSZYHBWSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Vernonia nigritiana Oliv. & Hiern.	JEOL database	Vassallo, A., et. al, Phytochem. 96, 288 (2013)

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.06	ALOGPS
logP	0.75	ChemAxon
logS	-3.7	ALOGPS
pKa (Strongest Acidic)	12.21	ChemAxon
pKa (Strongest Basic)	-0.55	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	10	ChemAxon
Hydrogen Donor Count	7	ChemAxon
Polar Surface Area	177.14 Å²	ChemAxon
Rotatable Bond Count	10	ChemAxon
Refractivity	169.74 m³·mol⁻¹	ChemAxon
Polarizability	68.24 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

Not Available

References

General References

Vassallo, A., et al. (2013). Vassallo, A., et. al, Phytochem. 96, 288 (2013). Phytochem..

Showing NP-Card for 3beta-O-beta-D-glucopyranosyloxy-16beta,26,29-trihydroxy-5astigmasta-7,9(+ (NP0042706)

MOL for NP0042706 (3beta-O-beta-D-glucopyranosyloxy-16beta,26,29-trihydroxy-5astigmasta-7,9(+)

3D MOL for NP0042706 (3beta-O-beta-D-glucopyranosyloxy-16beta,26,29-trihydroxy-5astigmasta-7,9(+)

3D SDF for NP0042706 (3beta-O-beta-D-glucopyranosyloxy-16beta,26,29-trihydroxy-5astigmasta-7,9(+)

3D-SDF for NP0042706 (3beta-O-beta-D-glucopyranosyloxy-16beta,26,29-trihydroxy-5astigmasta-7,9(+)

PDB for NP0042706 (3beta-O-beta-D-glucopyranosyloxy-16beta,26,29-trihydroxy-5astigmasta-7,9(+)

3D PDB for NP0042706 (3beta-O-beta-D-glucopyranosyloxy-16beta,26,29-trihydroxy-5astigmasta-7,9(+)

SMILES for NP0042706 (3beta-O-beta-D-glucopyranosyloxy-16beta,26,29-trihydroxy-5astigmasta-7,9(+)

INCHI for NP0042706 (3beta-O-beta-D-glucopyranosyloxy-16beta,26,29-trihydroxy-5astigmasta-7,9(+)

Structure for NP0042706 (3beta-O-beta-D-glucopyranosyloxy-16beta,26,29-trihydroxy-5astigmasta-7,9(+)

3D Structure for NP0042706 (3beta-O-beta-D-glucopyranosyloxy-16beta,26,29-trihydroxy-5astigmasta-7,9(+)