NP-MRD: Showing NP-Card for (4bR,10bR)-4b-hydroxy-10b,12-dihydrodibenzo[c,h][2,6]naphthyridine-5,11(4+ (NP0042436)

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Record Information

Version

2.0

Created at

2021-06-21 00:06:03 UTC

Updated at

2021-06-30 00:17:31 UTC

NP-MRD ID

NP0042436

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(4bR,10bR)-4b-hydroxy-10b,12-dihydrodibenzo[c,h][2,6]naphthyridine-5,11(4+

Provided By

JEOL Database JEOL Logo

Description

(4bR,10bR)-4b-hydroxy-10b,12-dihydrodibenzo[c,h][2,6]naphthyridine-5,11(4+ is found in Serratia sp. PAMC 25557. (4bR,10bR)-4b-hydroxy-10b,12-dihydrodibenzo[c,h][2,6]naphthyridine-5,11(4+ was first documented in 2013 (Bhattarai, H. D., et al.). Based on a literature review very few articles have been published on (1R,10R)-8,17-diazatetracyclo[8.8.0.0²,⁷.0¹¹,¹⁶]Octadeca-2,4,6,8,11,13,15,17-octaene-1,9,18-triol.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306212102063D          

 33 36  0  0  0  0            999 V2000
   -0.8967   -0.3818    1.4231 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7072   -1.0598    0.4136 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6668   -2.4214    0.5262 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5090   -3.3000   -0.5433 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2947   -4.6552   -0.2846 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1308   -5.5457   -1.3447 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1951   -5.0831   -2.6568 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4302   -3.7306   -2.9100 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5879   -2.8200   -1.8523 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9377   -1.3611   -2.0851 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3004   -0.9604   -3.3213 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4728   -1.1635   -2.2386 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2615   -2.0456   -2.5770 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9404    0.1182   -2.0754 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1784    1.1884   -1.6084 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7066    2.4779   -1.6539 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9419    3.5540   -1.2033 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6607    3.3373   -0.6977 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1429    2.0433   -0.6339 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9017    0.9570   -1.0902 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3944   -0.4674   -0.9578 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7524   -2.7835    1.4685 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2444   -5.0293    0.7340 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0412   -6.6009   -1.1489 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0786   -5.7762   -3.4863 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5092   -3.3901   -3.9410 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5971   -0.0542   -3.5183 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9175    0.2547   -2.3059 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7041    2.6620   -2.0432 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3472    4.5623   -1.2388 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0711    4.1757   -0.3341 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8437    1.8862   -0.2025 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7027   -0.4383   -1.0393 H   0  0  0  0  0  0  0  0  0  0  0  0
  4  9  2  0  0  0  0
 21 20  1  0  0  0  0
 10 12  1  0  0  0  0
 12 14  1  0  0  0  0
 14 15  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
 20 15  2  0  0  0  0
  6  7  1  0  0  0  0
 15 16  1  0  0  0  0
  4  3  1  0  0  0  0
 16 17  2  0  0  0  0
  9 10  1  0  0  0  0
 17 18  1  0  0  0  0
 21  2  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
  2  3  1  0  0  0  0
 10 11  1  6  0  0  0
 21 10  1  0  0  0  0
 21 33  1  6  0  0  0
  4  5  1  0  0  0  0
  2  1  2  0  0  0  0
  5  6  2  0  0  0  0
 12 13  2  0  0  0  0
  6 24  1  0  0  0  0
  7 25  1  0  0  0  0
  8 26  1  0  0  0  0
  5 23  1  0  0  0  0
  3 22  1  0  0  0  0
 14 28  1  0  0  0  0
 16 29  1  0  0  0  0
 17 30  1  0  0  0  0
 18 31  1  0  0  0  0
 19 32  1  0  0  0  0
 11 27  1  0  0  0  0
M  END

     RDKit          3D

 33 36  0  0  0  0  0  0  0  0999 V2000
   -0.8967   -0.3818    1.4231 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7072   -1.0598    0.4136 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6668   -2.4214    0.5262 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5090   -3.3000   -0.5433 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2947   -4.6552   -0.2846 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1308   -5.5457   -1.3447 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1951   -5.0831   -2.6568 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4302   -3.7306   -2.9100 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5879   -2.8200   -1.8523 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9377   -1.3611   -2.0851 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3004   -0.9604   -3.3213 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4728   -1.1635   -2.2386 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2615   -2.0456   -2.5770 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9404    0.1182   -2.0754 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1784    1.1884   -1.6084 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7066    2.4779   -1.6539 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9419    3.5540   -1.2033 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6607    3.3373   -0.6977 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1429    2.0433   -0.6339 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9017    0.9570   -1.0902 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3944   -0.4674   -0.9578 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7524   -2.7835    1.4685 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2444   -5.0293    0.7340 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0412   -6.6009   -1.1489 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0786   -5.7762   -3.4863 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5092   -3.3901   -3.9410 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5971   -0.0542   -3.5183 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9175    0.2547   -2.3059 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7041    2.6620   -2.0432 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3472    4.5623   -1.2388 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0711    4.1757   -0.3341 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8437    1.8862   -0.2025 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7027   -0.4383   -1.0393 H   0  0  0  0  0  0  0  0  0  0  0  0
  4  9  2  0
 21 20  1  0
 10 12  1  0
 12 14  1  0
 14 15  1  0
  7  8  2  0
  8  9  1  0
 20 15  2  0
  6  7  1  0
 15 16  1  0
  4  3  1  0
 16 17  2  0
  9 10  1  0
 17 18  1  0
 21  2  1  0
 18 19  2  0
 19 20  1  0
  2  3  1  0
 10 11  1  6
 21 10  1  0
 21 33  1  6
  4  5  1  0
  2  1  2  0
  5  6  2  0
 12 13  2  0
  6 24  1  0
  7 25  1  0
  8 26  1  0
  5 23  1  0
  3 22  1  0
 14 28  1  0
 16 29  1  0
 17 30  1  0
 18 31  1  0
 19 32  1  0
 11 27  1  0
M  END


  Mrv1652306212102063D          

 33 36  0  0  0  0            999 V2000
   -0.8967   -0.3818    1.4231 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7072   -1.0598    0.4136 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6668   -2.4214    0.5262 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5090   -3.3000   -0.5433 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2947   -4.6552   -0.2846 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1308   -5.5457   -1.3447 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1951   -5.0831   -2.6568 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4302   -3.7306   -2.9100 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5879   -2.8200   -1.8523 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9377   -1.3611   -2.0851 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3004   -0.9604   -3.3213 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4728   -1.1635   -2.2386 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2615   -2.0456   -2.5770 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9404    0.1182   -2.0754 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1784    1.1884   -1.6084 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7066    2.4779   -1.6539 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9419    3.5540   -1.2033 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6607    3.3373   -0.6977 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1429    2.0433   -0.6339 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9017    0.9570   -1.0902 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3944   -0.4674   -0.9578 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7524   -2.7835    1.4685 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2444   -5.0293    0.7340 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0412   -6.6009   -1.1489 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0786   -5.7762   -3.4863 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5092   -3.3901   -3.9410 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5971   -0.0542   -3.5183 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9175    0.2547   -2.3059 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7041    2.6620   -2.0432 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3472    4.5623   -1.2388 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0711    4.1757   -0.3341 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8437    1.8862   -0.2025 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7027   -0.4383   -1.0393 H   0  0  0  0  0  0  0  0  0  0  0  0
  4  9  2  0  0  0  0
 21 20  1  0  0  0  0
 10 12  1  0  0  0  0
 12 14  1  0  0  0  0
 14 15  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
 20 15  2  0  0  0  0
  6  7  1  0  0  0  0
 15 16  1  0  0  0  0
  4  3  1  0  0  0  0
 16 17  2  0  0  0  0
  9 10  1  0  0  0  0
 17 18  1  0  0  0  0
 21  2  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
  2  3  1  0  0  0  0
 10 11  1  6  0  0  0
 21 10  1  0  0  0  0
 21 33  1  6  0  0  0
  4  5  1  0  0  0  0
  2  1  2  0  0  0  0
  5  6  2  0  0  0  0
 12 13  2  0  0  0  0
  6 24  1  0  0  0  0
  7 25  1  0  0  0  0
  8 26  1  0  0  0  0
  5 23  1  0  0  0  0
  3 22  1  0  0  0  0
 14 28  1  0  0  0  0
 16 29  1  0  0  0  0
 17 30  1  0  0  0  0
 18 31  1  0  0  0  0
 19 32  1  0  0  0  0
 11 27  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0042436

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@]12C(=O)N([H])C3=C(C([H])=C([H])C([H])=C3[H])[C@@]1([H])C(=O)N([H])C1=C2C([H])=C([H])C([H])=C1[H]

> <INCHI_IDENTIFIER>
InChI=1S/C16H12N2O3/c19-14-13-9-5-1-3-7-11(9)18-15(20)16(13,21)10-6-2-4-8-12(10)17-14/h1-8,13,21H,(H,17,19)(H,18,20)/t13-,16-/m0/s1

> <INCHI_KEY>
TVQHIBBITLLBPD-BBRMVZONSA-N

> <FORMULA>
C16H12N2O3

> <MOLECULAR_WEIGHT>
280.283

> <EXACT_MASS>
280.084792254

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
33

> <JCHEM_AVERAGE_POLARIZABILITY>
28.278135486730765

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,10R)-1-hydroxy-8,17-diazatetracyclo[8.8.0.0^{2,7}.0^{11,16}]octadeca-2(7),3,5,11(16),12,14-hexaene-9,18-dione

> <ALOGPS_LOGP>
1.53

> <JCHEM_LOGP>
1.2856920349999998

> <ALOGPS_LOGS>
-2.35

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.14784354048264

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.31303491977037

> <JCHEM_PKA_STRONGEST_BASIC>
-4.382696891926668

> <JCHEM_POLAR_SURFACE_AREA>
78.43

> <JCHEM_REFRACTIVITY>
78.56060000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.25e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,10R)-1-hydroxy-8,17-diazatetracyclo[8.8.0.0^{2,7}.0^{11,16}]octadeca-2(7),3,5,11(16),12,14-hexaene-9,18-dione

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 33 36  0  0  0  0  0  0  0  0999 V2000
   -0.8967   -0.3818    1.4231 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7072   -1.0598    0.4136 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6668   -2.4214    0.5262 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5090   -3.3000   -0.5433 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2947   -4.6552   -0.2846 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1308   -5.5457   -1.3447 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1951   -5.0831   -2.6568 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4302   -3.7306   -2.9100 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5879   -2.8200   -1.8523 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9377   -1.3611   -2.0851 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3004   -0.9604   -3.3213 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4728   -1.1635   -2.2386 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2615   -2.0456   -2.5770 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9404    0.1182   -2.0754 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1784    1.1884   -1.6084 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7066    2.4779   -1.6539 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9419    3.5540   -1.2033 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6607    3.3373   -0.6977 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1429    2.0433   -0.6339 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9017    0.9570   -1.0902 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3944   -0.4674   -0.9578 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7524   -2.7835    1.4685 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2444   -5.0293    0.7340 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0412   -6.6009   -1.1489 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0786   -5.7762   -3.4863 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5092   -3.3901   -3.9410 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5971   -0.0542   -3.5183 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9175    0.2547   -2.3059 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7041    2.6620   -2.0432 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3472    4.5623   -1.2388 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0711    4.1757   -0.3341 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8437    1.8862   -0.2025 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7027   -0.4383   -1.0393 H   0  0  0  0  0  0  0  0  0  0  0  0
  4  9  2  0
 21 20  1  0
 10 12  1  0
 12 14  1  0
 14 15  1  0
  7  8  2  0
  8  9  1  0
 20 15  2  0
  6  7  1  0
 15 16  1  0
  4  3  1  0
 16 17  2  0
  9 10  1  0
 17 18  1  0
 21  2  1  0
 18 19  2  0
 19 20  1  0
  2  3  1  0
 10 11  1  6
 21 10  1  0
 21 33  1  6
  4  5  1  0
  2  1  2  0
  5  6  2  0
 12 13  2  0
  6 24  1  0
  7 25  1  0
  8 26  1  0
  5 23  1  0
  3 22  1  0
 14 28  1  0
 16 29  1  0
 17 30  1  0
 18 31  1  0
 19 32  1  0
 11 27  1  0
M  END

HEADER    PROTEIN                                 21-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   21-JUN-21         0                                  
HETATM    1  O   UNK     0      -0.897  -0.382   1.423  0.00  0.00           O+0
HETATM    2  C   UNK     0      -0.707  -1.060   0.414  0.00  0.00           C+0
HETATM    3  N   UNK     0      -0.667  -2.421   0.526  0.00  0.00           N+0
HETATM    4  C   UNK     0      -0.509  -3.300  -0.543  0.00  0.00           C+0
HETATM    5  C   UNK     0      -0.295  -4.655  -0.285  0.00  0.00           C+0
HETATM    6  C   UNK     0      -0.131  -5.546  -1.345  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.195  -5.083  -2.657  0.00  0.00           C+0
HETATM    8  C   UNK     0      -0.430  -3.731  -2.910  0.00  0.00           C+0
HETATM    9  C   UNK     0      -0.588  -2.820  -1.852  0.00  0.00           C+0
HETATM   10  C   UNK     0      -0.938  -1.361  -2.085  0.00  0.00           C+0
HETATM   11  O   UNK     0      -0.300  -0.960  -3.321  0.00  0.00           O+0
HETATM   12  C   UNK     0      -2.473  -1.163  -2.239  0.00  0.00           C+0
HETATM   13  O   UNK     0      -3.261  -2.046  -2.577  0.00  0.00           O+0
HETATM   14  N   UNK     0      -2.940   0.118  -2.075  0.00  0.00           N+0
HETATM   15  C   UNK     0      -2.178   1.188  -1.608  0.00  0.00           C+0
HETATM   16  C   UNK     0      -2.707   2.478  -1.654  0.00  0.00           C+0
HETATM   17  C   UNK     0      -1.942   3.554  -1.203  0.00  0.00           C+0
HETATM   18  C   UNK     0      -0.661   3.337  -0.698  0.00  0.00           C+0
HETATM   19  C   UNK     0      -0.143   2.043  -0.634  0.00  0.00           C+0
HETATM   20  C   UNK     0      -0.902   0.957  -1.090  0.00  0.00           C+0
HETATM   21  C   UNK     0      -0.394  -0.467  -0.958  0.00  0.00           C+0
HETATM   22  H   UNK     0      -0.752  -2.784   1.468  0.00  0.00           H+0
HETATM   23  H   UNK     0      -0.244  -5.029   0.734  0.00  0.00           H+0
HETATM   24  H   UNK     0       0.041  -6.601  -1.149  0.00  0.00           H+0
HETATM   25  H   UNK     0      -0.079  -5.776  -3.486  0.00  0.00           H+0
HETATM   26  H   UNK     0      -0.509  -3.390  -3.941  0.00  0.00           H+0
HETATM   27  H   UNK     0      -0.597  -0.054  -3.518  0.00  0.00           H+0
HETATM   28  H   UNK     0      -3.918   0.255  -2.306  0.00  0.00           H+0
HETATM   29  H   UNK     0      -3.704   2.662  -2.043  0.00  0.00           H+0
HETATM   30  H   UNK     0      -2.347   4.562  -1.239  0.00  0.00           H+0
HETATM   31  H   UNK     0      -0.071   4.176  -0.334  0.00  0.00           H+0
HETATM   32  H   UNK     0       0.844   1.886  -0.203  0.00  0.00           H+0
HETATM   33  H   UNK     0       0.703  -0.438  -1.039  0.00  0.00           H+0
CONECT    1    2                                                            
CONECT    2   21    3    1                                                  
CONECT    3    4    2   22                                                  
CONECT    4    9    3    5                                                  
CONECT    5    4    6   23                                                  
CONECT    6    7    5   24                                                  
CONECT    7    8    6   25                                                  
CONECT    8    7    9   26                                                  
CONECT    9    4    8   10                                                  
CONECT   10   12    9   11   21                                             
CONECT   11   10   27                                                       
CONECT   12   10   14   13                                                  
CONECT   13   12                                                            
CONECT   14   12   15   28                                                  
CONECT   15   14   20   16                                                  
CONECT   16   15   17   29                                                  
CONECT   17   16   18   30                                                  
CONECT   18   17   19   31                                                  
CONECT   19   18   20   32                                                  
CONECT   20   21   15   19                                                  
CONECT   21   20    2   10   33                                             
CONECT   22    3                                                            
CONECT   23    5                                                            
CONECT   24    6                                                            
CONECT   25    7                                                            
CONECT   26    8                                                            
CONECT   27   11                                                            
CONECT   28   14                                                            
CONECT   29   16                                                            
CONECT   30   17                                                            
CONECT   31   18                                                            
CONECT   32   19                                                            
CONECT   33   21                                                            
MASTER        0    0    0    0    0    0    0    0   33    0   72    0
END

RDKit          3D

33 36  0  0  0  0  0  0  0  0999 V2000
   -0.8967   -0.3818    1.4231 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7072   -1.0598    0.4136 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6668   -2.4214    0.5262 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5090   -3.3000   -0.5433 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2947   -4.6552   -0.2846 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1308   -5.5457   -1.3447 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1951   -5.0831   -2.6568 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4302   -3.7306   -2.9100 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5879   -2.8200   -1.8523 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9377   -1.3611   -2.0851 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3004   -0.9604   -3.3213 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4728   -1.1635   -2.2386 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2615   -2.0456   -2.5770 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9404    0.1182   -2.0754 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1784    1.1884   -1.6084 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7066    2.4779   -1.6539 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9419    3.5540   -1.2033 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6607    3.3373   -0.6977 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1429    2.0433   -0.6339 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9017    0.9570   -1.0902 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3944   -0.4674   -0.9578 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7524   -2.7835    1.4685 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2444   -5.0293    0.7340 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0412   -6.6009   -1.1489 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0786   -5.7762   -3.4863 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5092   -3.3901   -3.9410 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5971   -0.0542   -3.5183 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9175    0.2547   -2.3059 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7041    2.6620   -2.0432 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3472    4.5623   -1.2388 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0711    4.1757   -0.3341 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8437    1.8862   -0.2025 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7027   -0.4383   -1.0393 H   0  0  0  0  0  0  0  0  0  0  0  0
  4  9  2  0
 21 20  1  0
 10 12  1  0
 12 14  1  0
 14 15  1  0
  7  8  2  0
  8  9  1  0
 20 15  2  0
  6  7  1  0
 15 16  1  0
  4  3  1  0
 16 17  2  0
  9 10  1  0
 17 18  1  0
 21  2  1  0
 18 19  2  0
 19 20  1  0
  2  3  1  0
 10 11  1  6
 21 10  1  0
 21 33  1  6
  4  5  1  0
  2  1  2  0
  5  6  2  0
 12 13  2  0
  6 24  1  0
  7 25  1  0
  8 26  1  0
  5 23  1  0
  3 22  1  0
 14 28  1  0
 16 29  1  0
 17 30  1  0
 18 31  1  0
 19 32  1  0
 11 27  1  0
M  END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₆H₁₂N₂O₃

Average Mass

280.2830 Da

Monoisotopic Mass

280.08479 Da

IUPAC Name

(1R,10R)-1-hydroxy-8,17-diazatetracyclo[8.8.0.0^{2,7}.0^{11,16}]octadeca-2(7),3,5,11(16),12,14-hexaene-9,18-dione

Traditional Name

(1R,10R)-1-hydroxy-8,17-diazatetracyclo[8.8.0.0^{2,7}.0^{11,16}]octadeca-2(7),3,5,11(16),12,14-hexaene-9,18-dione

CAS Registry Number

Not Available

SMILES

[H]O[C@]12C(=O)N([H])C3=C(C([H])=C([H])C([H])=C3[H])[C@@]1([H])C(=O)N([H])C1=C2C([H])=C([H])C([H])=C1[H]

InChI Identifier

InChI=1S/C16H12N2O3/c19-14-13-9-5-1-3-7-11(9)18-15(20)16(13,21)10-6-2-4-8-12(10)17-14/h1-8,13,21H,(H,17,19)(H,18,20)/t13-,16-/m0/s1

InChI Key

TVQHIBBITLLBPD-BBRMVZONSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Serratia sp. PAMC 25557	JEOL database	Bhattarai, H. D., et al, Phytochem. Lett. 6, 536 (2013)

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.53	ALOGPS
logP	1.29	ChemAxon
logS	-2.4	ALOGPS
pKa (Strongest Acidic)	11.31	ChemAxon
pKa (Strongest Basic)	-4.4	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	78.43 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	78.56 m³·mol⁻¹	ChemAxon
Polarizability	28.28 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

78439580

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

102103052

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Bhattarai, H. D., et al. (2013). Bhattarai, H. D., et al, Phytochem. Lett. 6, 536 (2013). Phytochem..

Showing NP-Card for (4bR,10bR)-4b-hydroxy-10b,12-dihydrodibenzo[c,h][2,6]naphthyridine-5,11(4+ (NP0042436)

MOL for NP0042436 ((4bR,10bR)-4b-hydroxy-10b,12-dihydrodibenzo[c,h][2,6]naphthyridine-5,11(4+)

3D MOL for NP0042436 ((4bR,10bR)-4b-hydroxy-10b,12-dihydrodibenzo[c,h][2,6]naphthyridine-5,11(4+)

3D SDF for NP0042436 ((4bR,10bR)-4b-hydroxy-10b,12-dihydrodibenzo[c,h][2,6]naphthyridine-5,11(4+)

3D-SDF for NP0042436 ((4bR,10bR)-4b-hydroxy-10b,12-dihydrodibenzo[c,h][2,6]naphthyridine-5,11(4+)

PDB for NP0042436 ((4bR,10bR)-4b-hydroxy-10b,12-dihydrodibenzo[c,h][2,6]naphthyridine-5,11(4+)

3D PDB for NP0042436 ((4bR,10bR)-4b-hydroxy-10b,12-dihydrodibenzo[c,h][2,6]naphthyridine-5,11(4+)

SMILES for NP0042436 ((4bR,10bR)-4b-hydroxy-10b,12-dihydrodibenzo[c,h][2,6]naphthyridine-5,11(4+)

INCHI for NP0042436 ((4bR,10bR)-4b-hydroxy-10b,12-dihydrodibenzo[c,h][2,6]naphthyridine-5,11(4+)

Structure for NP0042436 ((4bR,10bR)-4b-hydroxy-10b,12-dihydrodibenzo[c,h][2,6]naphthyridine-5,11(4+)

3D Structure for NP0042436 ((4bR,10bR)-4b-hydroxy-10b,12-dihydrodibenzo[c,h][2,6]naphthyridine-5,11(4+)