NP-MRD: Showing NP-Card for aphanamgrandin A (NP0041515)

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Record Information

Version

2.0

Created at

2021-06-20 23:24:41 UTC

Updated at

2021-06-30 00:16:04 UTC

NP-MRD ID

NP0041515

Secondary Accession Numbers

None

Natural Product Identification

Common Name

aphanamgrandin A

Provided By

JEOL Database JEOL Logo

Description

aphanamgrandin A is found in Aphanamixis grandifolia Blume. aphanamgrandin A was first documented in 2012 (Zeng, Q., et al.).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306212101243D          

 80 84  0  0  0  0            999 V2000
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M  END

     RDKit          3D

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   -3.0006   -0.5730   -1.7995 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6078   -0.2892   -2.8310 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2865    0.9602   -0.1203 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1805    1.7405   -1.6746 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4930    0.5795   -2.7814 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0646    2.2425   -2.7630 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4998    1.8334   -2.0776 H   0  0  0  0  0  0  0  0  0  0  0  0
 25 26  1  1
 13 14  1  1
 15 13  1  0
  7  5  1  0
 25 27  1  0
  5  4  1  0
 30 13  1  0
  4  2  1  0
 18 17  1  0
  2  1  1  0
 17 16  1  0
  2  3  1  0
 16 15  2  0
 30 31  1  6
 13 12  1  0
 12 11  1  0
 25 18  1  0
 10 30  1  0
 18 19  1  0
 10 11  1  0
 25 24  1  0
 27 15  1  0
 19 21  1  0
 27 28  1  0
 24 23  1  0
 30 29  1  0
 21 22  1  0
 23 22  1  0
 10  8  1  0
 19 20  1  6
 29 28  1  0
 19 33  1  0
  8  9  1  0
 23 32  1  0
 33 32  1  0
 33 34  2  0
  8  7  1  0
  5  6  2  0
 17 59  1  0
 17 60  1  0
 27 73  1  1
 29 76  1  0
 29 77  1  0
 28 74  1  0
 28 75  1  0
 26 70  1  0
 26 71  1  0
 26 72  1  0
 16 58  1  0
 12 53  1  0
 12 54  1  0
 10 50  1  1
 11 51  1  0
 11 52  1  0
  8 46  1  6
  9 47  1  0
  9 48  1  0
  9 49  1  0
  7 44  1  0
  7 45  1  0
 14 55  1  0
 14 56  1  0
 14 57  1  0
  4 42  1  0
  4 43  1  0
  2 38  1  1
  1 35  1  0
  1 36  1  0
  1 37  1  0
  3 39  1  0
  3 40  1  0
  3 41  1  0
 31 78  1  0
 31 79  1  0
 31 80  1  0
 18 61  1  6
 24 68  1  0
 24 69  1  0
 21 65  1  0
 21 66  1  0
 23 67  1  6
 20 62  1  0
 20 63  1  0
 20 64  1  0
M  END


  Mrv1652306212101243D          

 80 84  0  0  0  0            999 V2000
   -3.3241    7.1421    3.3330 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5151    5.8713    3.0671 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.4512    4.7455    2.6200 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4307    6.1489    2.0153 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4010    5.0347    1.8972 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2126    4.2183    2.7993 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4320    4.9987    0.6254 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.0112    3.9358   -0.4073 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4007    4.2831   -0.9470 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0868    2.4834    0.1410 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.5259    2.1531    0.6462 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.7876    0.6613    0.3572 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.3950    0.0819    0.0402 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2692   -0.1969    1.4256 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2636   -1.1876   -0.7976 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3140   -1.8757   -1.2829 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2042   -2.9959   -2.2778 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1835   -3.0490   -2.9579 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3119   -4.1553   -4.0676 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.0094   -4.3728   -4.8388 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8098   -5.5301   -3.6253 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.1046   -5.5099   -3.0403 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8703   -4.3865   -3.4316 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7153   -3.1946   -2.4747 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.3032   -2.9848   -1.8585 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0974   -4.0473   -0.7232 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1930   -1.5786   -1.1170 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.9204   -0.3862   -1.7851 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.7189    0.9647   -1.0576 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2303    1.2720   -0.7907 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.4660    1.4876   -2.1728 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6267   -3.9725   -4.7751 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3438   -3.6771   -5.0811 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0630   -3.0544   -6.0989 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8241    7.4933    2.4238 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6761    7.9468    3.6961 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0911    6.9632    4.0941 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0424    5.5701    4.0102 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9051    3.8096    2.4660 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2195    4.5580    3.3777 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9578    4.9990    1.6825 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8969    6.3123    1.0383 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8752    7.0577    2.2759 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4756    4.8461    0.9236 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4085    5.9962    0.1690 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6885    4.0341   -1.2477 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4836    5.3544   -1.1601 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5970    3.7728   -1.8924 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1886    4.0137   -0.2371 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5997    2.4216    0.9949 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2897    2.7552    0.1412 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6065    2.3577    1.7195 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2740    0.1699    1.2075 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4781    0.5774   -0.4893 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3547   -0.3105    1.3755 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0784    0.5949    2.1578 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1356   -1.1193    1.8614 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3297   -1.5929   -1.0193 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4488   -3.9474   -1.7930 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9778   -2.8124   -3.0317 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2625   -2.0998   -3.5136 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4197   -3.4252   -5.2065 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7661   -4.8581   -4.2129 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8579   -5.0127   -5.7171 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1173   -5.9942   -2.9147 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8685   -6.2148   -4.4819 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9203   -4.6972   -3.4039 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0312   -2.3056   -3.0297 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4319   -3.3157   -1.6518 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9133   -5.0574   -1.0821 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2544   -3.8059   -0.0675 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9808   -4.0926   -0.0746 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7120   -1.7243   -0.1604 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0006   -0.5730   -1.7995 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6078   -0.2892   -2.8310 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2865    0.9602   -0.1203 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1805    1.7405   -1.6746 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4930    0.5795   -2.7814 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0646    2.2425   -2.7630 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4998    1.8334   -2.0776 H   0  0  0  0  0  0  0  0  0  0  0  0
 25 26  1  1  0  0  0
 13 14  1  1  0  0  0
 15 13  1  0  0  0  0
  7  5  1  0  0  0  0
 25 27  1  0  0  0  0
  5  4  1  0  0  0  0
 30 13  1  0  0  0  0
  4  2  1  0  0  0  0
 18 17  1  0  0  0  0
  2  1  1  0  0  0  0
 17 16  1  0  0  0  0
  2  3  1  0  0  0  0
 16 15  2  0  0  0  0
 30 31  1  6  0  0  0
 13 12  1  0  0  0  0
 12 11  1  0  0  0  0
 25 18  1  0  0  0  0
 10 30  1  0  0  0  0
 18 19  1  0  0  0  0
 10 11  1  0  0  0  0
 25 24  1  0  0  0  0
 27 15  1  0  0  0  0
 19 21  1  0  0  0  0
 27 28  1  0  0  0  0
 24 23  1  0  0  0  0
 30 29  1  0  0  0  0
 21 22  1  0  0  0  0
 23 22  1  0  0  0  0
 10  8  1  0  0  0  0
 19 20  1  6  0  0  0
 29 28  1  0  0  0  0
 19 33  1  0  0  0  0
  8  9  1  0  0  0  0
 23 32  1  0  0  0  0
 33 32  1  0  0  0  0
 33 34  2  0  0  0  0
  8  7  1  0  0  0  0
  5  6  2  0  0  0  0
 17 59  1  0  0  0  0
 17 60  1  0  0  0  0
 27 73  1  1  0  0  0
 29 76  1  0  0  0  0
 29 77  1  0  0  0  0
 28 74  1  0  0  0  0
 28 75  1  0  0  0  0
 26 70  1  0  0  0  0
 26 71  1  0  0  0  0
 26 72  1  0  0  0  0
 16 58  1  0  0  0  0
 12 53  1  0  0  0  0
 12 54  1  0  0  0  0
 10 50  1  1  0  0  0
 11 51  1  0  0  0  0
 11 52  1  0  0  0  0
  8 46  1  6  0  0  0
  9 47  1  0  0  0  0
  9 48  1  0  0  0  0
  9 49  1  0  0  0  0
  7 44  1  0  0  0  0
  7 45  1  0  0  0  0
 14 55  1  0  0  0  0
 14 56  1  0  0  0  0
 14 57  1  0  0  0  0
  4 42  1  0  0  0  0
  4 43  1  0  0  0  0
  2 38  1  1  0  0  0
  1 35  1  0  0  0  0
  1 36  1  0  0  0  0
  1 37  1  0  0  0  0
  3 39  1  0  0  0  0
  3 40  1  0  0  0  0
  3 41  1  0  0  0  0
 31 78  1  0  0  0  0
 31 79  1  0  0  0  0
 31 80  1  0  0  0  0
 18 61  1  6  0  0  0
 24 68  1  0  0  0  0
 24 69  1  0  0  0  0
 21 65  1  0  0  0  0
 21 66  1  0  0  0  0
 23 67  1  6  0  0  0
 20 62  1  0  0  0  0
 20 63  1  0  0  0  0
 20 64  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0041515

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]C1=C2[C@@]([H])(C([H])([H])C([H])([H])[C@@]3(C([H])([H])[H])[C@@]([H])(C([H])([H])C([H])([H])[C@]23C([H])([H])[H])[C@@]([H])(C([H])([H])[H])C([H])([H])C(=O)C([H])([H])C([H])(C([H])([H])[H])C([H])([H])[H])[C@@]2(C([H])([H])[H])C([H])([H])[C@@]3([H])OC(=O)[C@](C([H])([H])[H])(C([H])([H])O3)[C@]2([H])C1([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C30H46O4/c1-18(2)14-20(31)15-19(3)21-10-12-30(7)23-8-9-24-27(4,22(23)11-13-29(21,30)6)16-25-33-17-28(24,5)26(32)34-25/h8,18-19,21-22,24-25H,9-17H2,1-7H3/t19-,21-,22+,24+,25+,27+,28+,29-,30+/m0/s1

> <INCHI_KEY>
GEHUHFZJYOZGEZ-VTBUURGSSA-N

> <FORMULA>
C30H46O4

> <MOLECULAR_WEIGHT>
470.694

> <EXACT_MASS>
470.339609961

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
80

> <JCHEM_AVERAGE_POLARIZABILITY>
54.71070435933599

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1S,2R,6S,9S,10S,13S,14R,16R)-1,6,10,14-tetramethyl-9-[(2S)-6-methyl-4-oxoheptan-2-yl]-17,20-dioxapentacyclo[14.2.2.0^{2,14}.0^{5,13}.0^{6,10}]icos-4-en-18-one

> <ALOGPS_LOGP>
5.92

> <JCHEM_LOGP>
6.3787211863333315

> <ALOGPS_LOGS>
-6.09

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-4.327627082031738

> <JCHEM_POLAR_SURFACE_AREA>
52.6

> <JCHEM_REFRACTIVITY>
134.44799999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
3.84e-04 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,2R,6S,9S,10S,13S,14R,16R)-1,6,10,14-tetramethyl-9-[(2S)-6-methyl-4-oxoheptan-2-yl]-17,20-dioxapentacyclo[14.2.2.0^{2,14}.0^{5,13}.0^{6,10}]icos-4-en-18-one

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 80 84  0  0  0  0  0  0  0  0999 V2000
   -3.3241    7.1421    3.3330 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5151    5.8713    3.0671 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.4512    4.7455    2.6200 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4307    6.1489    2.0153 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4010    5.0347    1.8972 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2126    4.2183    2.7993 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4320    4.9987    0.6254 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0112    3.9358   -0.4073 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4007    4.2831   -0.9470 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0868    2.4834    0.1410 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.5259    2.1531    0.6462 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7876    0.6613    0.3572 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3950    0.0819    0.0402 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2692   -0.1969    1.4256 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2636   -1.1876   -0.7976 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3140   -1.8757   -1.2829 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2042   -2.9959   -2.2778 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1835   -3.0490   -2.9579 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3119   -4.1553   -4.0676 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.0094   -4.3728   -4.8388 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8098   -5.5301   -3.6253 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1046   -5.5099   -3.0403 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8703   -4.3865   -3.4316 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7153   -3.1946   -2.4747 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3032   -2.9848   -1.8585 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0974   -4.0473   -0.7232 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1930   -1.5786   -1.1170 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.9204   -0.3862   -1.7851 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7189    0.9647   -1.0576 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2303    1.2720   -0.7907 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.4660    1.4876   -2.1728 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6267   -3.9725   -4.7751 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3438   -3.6771   -5.0811 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0630   -3.0544   -6.0989 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8241    7.4933    2.4238 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6761    7.9468    3.6961 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0911    6.9632    4.0941 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0424    5.5701    4.0102 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9051    3.8096    2.4660 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2195    4.5580    3.3777 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9578    4.9990    1.6825 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8969    6.3123    1.0383 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8752    7.0577    2.2759 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4756    4.8461    0.9236 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4085    5.9962    0.1690 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6885    4.0341   -1.2477 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4836    5.3544   -1.1601 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5970    3.7728   -1.8924 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1886    4.0137   -0.2371 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5997    2.4216    0.9949 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2897    2.7552    0.1412 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6065    2.3577    1.7195 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2740    0.1699    1.2075 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4781    0.5774   -0.4893 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3547   -0.3105    1.3755 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0784    0.5949    2.1578 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1356   -1.1193    1.8614 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3297   -1.5929   -1.0193 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4488   -3.9474   -1.7930 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9778   -2.8124   -3.0317 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2625   -2.0998   -3.5136 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4197   -3.4252   -5.2065 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7661   -4.8581   -4.2129 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8579   -5.0127   -5.7171 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1173   -5.9942   -2.9147 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8685   -6.2148   -4.4819 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9203   -4.6972   -3.4039 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0312   -2.3056   -3.0297 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4319   -3.3157   -1.6518 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9133   -5.0574   -1.0821 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2544   -3.8059   -0.0675 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9808   -4.0926   -0.0746 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7120   -1.7243   -0.1604 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0006   -0.5730   -1.7995 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6078   -0.2892   -2.8310 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2865    0.9602   -0.1203 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1805    1.7405   -1.6746 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4930    0.5795   -2.7814 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0646    2.2425   -2.7630 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4998    1.8334   -2.0776 H   0  0  0  0  0  0  0  0  0  0  0  0
 25 26  1  1
 13 14  1  1
 15 13  1  0
  7  5  1  0
 25 27  1  0
  5  4  1  0
 30 13  1  0
  4  2  1  0
 18 17  1  0
  2  1  1  0
 17 16  1  0
  2  3  1  0
 16 15  2  0
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 19 21  1  0
 27 28  1  0
 24 23  1  0
 30 29  1  0
 21 22  1  0
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 10  8  1  0
 19 20  1  6
 29 28  1  0
 19 33  1  0
  8  9  1  0
 23 32  1  0
 33 32  1  0
 33 34  2  0
  8  7  1  0
  5  6  2  0
 17 59  1  0
 17 60  1  0
 27 73  1  1
 29 76  1  0
 29 77  1  0
 28 74  1  0
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 26 70  1  0
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 26 72  1  0
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 11 52  1  0
  8 46  1  6
  9 47  1  0
  9 48  1  0
  9 49  1  0
  7 44  1  0
  7 45  1  0
 14 55  1  0
 14 56  1  0
 14 57  1  0
  4 42  1  0
  4 43  1  0
  2 38  1  1
  1 35  1  0
  1 36  1  0
  1 37  1  0
  3 39  1  0
  3 40  1  0
  3 41  1  0
 31 78  1  0
 31 79  1  0
 31 80  1  0
 18 61  1  6
 24 68  1  0
 24 69  1  0
 21 65  1  0
 21 66  1  0
 23 67  1  6
 20 62  1  0
 20 63  1  0
 20 64  1  0
M  END

HEADER    PROTEIN                                 21-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   21-JUN-21         0                                  
HETATM    1  C   UNK     0      -3.324   7.142   3.333  0.00  0.00           C+0
HETATM    2  C   UNK     0      -2.515   5.871   3.067  0.00  0.00           C+0
HETATM    3  C   UNK     0      -3.451   4.745   2.620  0.00  0.00           C+0
HETATM    4  C   UNK     0      -1.431   6.149   2.015  0.00  0.00           C+0
HETATM    5  C   UNK     0      -0.401   5.035   1.897  0.00  0.00           C+0
HETATM    6  O   UNK     0      -0.213   4.218   2.799  0.00  0.00           O+0
HETATM    7  C   UNK     0       0.432   4.999   0.625  0.00  0.00           C+0
HETATM    8  C   UNK     0      -0.011   3.936  -0.407  0.00  0.00           C+0
HETATM    9  C   UNK     0      -1.401   4.283  -0.947  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.087   2.483   0.141  0.00  0.00           C+0
HETATM   11  C   UNK     0       1.526   2.153   0.646  0.00  0.00           C+0
HETATM   12  C   UNK     0       1.788   0.661   0.357  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.395   0.082   0.040  0.00  0.00           C+0
HETATM   14  C   UNK     0      -0.269  -0.197   1.426  0.00  0.00           C+0
HETATM   15  C   UNK     0       0.264  -1.188  -0.798  0.00  0.00           C+0
HETATM   16  C   UNK     0       1.314  -1.876  -1.283  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.204  -2.996  -2.278  0.00  0.00           C+0
HETATM   18  C   UNK     0      -0.184  -3.049  -2.958  0.00  0.00           C+0
HETATM   19  C   UNK     0      -0.312  -4.155  -4.068  0.00  0.00           C+0
HETATM   20  C   UNK     0       1.009  -4.373  -4.839  0.00  0.00           C+0
HETATM   21  C   UNK     0      -0.810  -5.530  -3.625  0.00  0.00           C+0
HETATM   22  O   UNK     0      -2.105  -5.510  -3.040  0.00  0.00           O+0
HETATM   23  C   UNK     0      -2.870  -4.386  -3.432  0.00  0.00           C+0
HETATM   24  C   UNK     0      -2.715  -3.195  -2.475  0.00  0.00           C+0
HETATM   25  C   UNK     0      -1.303  -2.985  -1.859  0.00  0.00           C+0
HETATM   26  C   UNK     0      -1.097  -4.047  -0.723  0.00  0.00           C+0
HETATM   27  C   UNK     0      -1.193  -1.579  -1.117  0.00  0.00           C+0
HETATM   28  C   UNK     0      -1.920  -0.386  -1.785  0.00  0.00           C+0
HETATM   29  C   UNK     0      -1.719   0.965  -1.058  0.00  0.00           C+0
HETATM   30  C   UNK     0      -0.230   1.272  -0.791  0.00  0.00           C+0
HETATM   31  C   UNK     0       0.466   1.488  -2.173  0.00  0.00           C+0
HETATM   32  O   UNK     0      -2.627  -3.973  -4.775  0.00  0.00           O+0
HETATM   33  C   UNK     0      -1.344  -3.677  -5.081  0.00  0.00           C+0
HETATM   34  O   UNK     0      -1.063  -3.054  -6.099  0.00  0.00           O+0
HETATM   35  H   UNK     0      -3.824   7.493   2.424  0.00  0.00           H+0
HETATM   36  H   UNK     0      -2.676   7.947   3.696  0.00  0.00           H+0
HETATM   37  H   UNK     0      -4.091   6.963   4.094  0.00  0.00           H+0
HETATM   38  H   UNK     0      -2.042   5.570   4.010  0.00  0.00           H+0
HETATM   39  H   UNK     0      -2.905   3.810   2.466  0.00  0.00           H+0
HETATM   40  H   UNK     0      -4.220   4.558   3.378  0.00  0.00           H+0
HETATM   41  H   UNK     0      -3.958   4.999   1.683  0.00  0.00           H+0
HETATM   42  H   UNK     0      -1.897   6.312   1.038  0.00  0.00           H+0
HETATM   43  H   UNK     0      -0.875   7.058   2.276  0.00  0.00           H+0
HETATM   44  H   UNK     0       1.476   4.846   0.924  0.00  0.00           H+0
HETATM   45  H   UNK     0       0.409   5.996   0.169  0.00  0.00           H+0
HETATM   46  H   UNK     0       0.689   4.034  -1.248  0.00  0.00           H+0
HETATM   47  H   UNK     0      -1.484   5.354  -1.160  0.00  0.00           H+0
HETATM   48  H   UNK     0      -1.597   3.773  -1.892  0.00  0.00           H+0
HETATM   49  H   UNK     0      -2.189   4.014  -0.237  0.00  0.00           H+0
HETATM   50  H   UNK     0      -0.600   2.422   0.995  0.00  0.00           H+0
HETATM   51  H   UNK     0       2.290   2.755   0.141  0.00  0.00           H+0
HETATM   52  H   UNK     0       1.607   2.358   1.720  0.00  0.00           H+0
HETATM   53  H   UNK     0       2.274   0.170   1.208  0.00  0.00           H+0
HETATM   54  H   UNK     0       2.478   0.577  -0.489  0.00  0.00           H+0
HETATM   55  H   UNK     0      -1.355  -0.311   1.375  0.00  0.00           H+0
HETATM   56  H   UNK     0      -0.078   0.595   2.158  0.00  0.00           H+0
HETATM   57  H   UNK     0       0.136  -1.119   1.861  0.00  0.00           H+0
HETATM   58  H   UNK     0       2.330  -1.593  -1.019  0.00  0.00           H+0
HETATM   59  H   UNK     0       1.449  -3.947  -1.793  0.00  0.00           H+0
HETATM   60  H   UNK     0       1.978  -2.812  -3.032  0.00  0.00           H+0
HETATM   61  H   UNK     0      -0.263  -2.100  -3.514  0.00  0.00           H+0
HETATM   62  H   UNK     0       1.420  -3.425  -5.207  0.00  0.00           H+0
HETATM   63  H   UNK     0       1.766  -4.858  -4.213  0.00  0.00           H+0
HETATM   64  H   UNK     0       0.858  -5.013  -5.717  0.00  0.00           H+0
HETATM   65  H   UNK     0      -0.117  -5.994  -2.915  0.00  0.00           H+0
HETATM   66  H   UNK     0      -0.869  -6.215  -4.482  0.00  0.00           H+0
HETATM   67  H   UNK     0      -3.920  -4.697  -3.404  0.00  0.00           H+0
HETATM   68  H   UNK     0      -3.031  -2.306  -3.030  0.00  0.00           H+0
HETATM   69  H   UNK     0      -3.432  -3.316  -1.652  0.00  0.00           H+0
HETATM   70  H   UNK     0      -0.913  -5.057  -1.082  0.00  0.00           H+0
HETATM   71  H   UNK     0      -0.254  -3.806  -0.068  0.00  0.00           H+0
HETATM   72  H   UNK     0      -1.981  -4.093  -0.075  0.00  0.00           H+0
HETATM   73  H   UNK     0      -1.712  -1.724  -0.160  0.00  0.00           H+0
HETATM   74  H   UNK     0      -3.001  -0.573  -1.800  0.00  0.00           H+0
HETATM   75  H   UNK     0      -1.608  -0.289  -2.831  0.00  0.00           H+0
HETATM   76  H   UNK     0      -2.287   0.960  -0.120  0.00  0.00           H+0
HETATM   77  H   UNK     0      -2.180   1.740  -1.675  0.00  0.00           H+0
HETATM   78  H   UNK     0       0.493   0.580  -2.781  0.00  0.00           H+0
HETATM   79  H   UNK     0      -0.065   2.243  -2.763  0.00  0.00           H+0
HETATM   80  H   UNK     0       1.500   1.833  -2.078  0.00  0.00           H+0
CONECT    1    2   35   36   37                                             
CONECT    2    4    1    3   38                                             
CONECT    3    2   39   40   41                                             
CONECT    4    5    2   42   43                                             
CONECT    5    7    4    6                                                  
CONECT    6    5                                                            
CONECT    7    5    8   44   45                                             
CONECT    8   10    9    7   46                                             
CONECT    9    8   47   48   49                                             
CONECT   10   30   11    8   50                                             
CONECT   11   12   10   51   52                                             
CONECT   12   13   11   53   54                                             
CONECT   13   14   15   30   12                                             
CONECT   14   13   55   56   57                                             
CONECT   15   13   16   27                                                  
CONECT   16   17   15   58                                                  
CONECT   17   18   16   59   60                                             
CONECT   18   17   25   19   61                                             
CONECT   19   18   21   20   33                                             
CONECT   20   19   62   63   64                                             
CONECT   21   19   22   65   66                                             
CONECT   22   21   23                                                       
CONECT   23   24   22   32   67                                             
CONECT   24   25   23   68   69                                             
CONECT   25   26   27   18   24                                             
CONECT   26   25   70   71   72                                             
CONECT   27   25   15   28   73                                             
CONECT   28   27   29   74   75                                             
CONECT   29   30   28   76   77                                             
CONECT   30   13   31   10   29                                             
CONECT   31   30   78   79   80                                             
CONECT   32   23   33                                                       
CONECT   33   19   32   34                                                  
CONECT   34   33                                                            
CONECT   35    1                                                            
CONECT   36    1                                                            
CONECT   37    1                                                            
CONECT   38    2                                                            
CONECT   39    3                                                            
CONECT   40    3                                                            
CONECT   41    3                                                            
CONECT   42    4                                                            
CONECT   43    4                                                            
CONECT   44    7                                                            
CONECT   45    7                                                            
CONECT   46    8                                                            
CONECT   47    9                                                            
CONECT   48    9                                                            
CONECT   49    9                                                            
CONECT   50   10                                                            
CONECT   51   11                                                            
CONECT   52   11                                                            
CONECT   53   12                                                            
CONECT   54   12                                                            
CONECT   55   14                                                            
CONECT   56   14                                                            
CONECT   57   14                                                            
CONECT   58   16                                                            
CONECT   59   17                                                            
CONECT   60   17                                                            
CONECT   61   18                                                            
CONECT   62   20                                                            
CONECT   63   20                                                            
CONECT   64   20                                                            
CONECT   65   21                                                            
CONECT   66   21                                                            
CONECT   67   23                                                            
CONECT   68   24                                                            
CONECT   69   24                                                            
CONECT   70   26                                                            
CONECT   71   26                                                            
CONECT   72   26                                                            
CONECT   73   27                                                            
CONECT   74   28                                                            
CONECT   75   28                                                            
CONECT   76   29                                                            
CONECT   77   29                                                            
CONECT   78   31                                                            
CONECT   79   31                                                            
CONECT   80   31                                                            
MASTER        0    0    0    0    0    0    0    0   80    0  168    0
END

RDKit          3D

80 84  0  0  0  0  0  0  0  0999 V2000
   -3.3241    7.1421    3.3330 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5151    5.8713    3.0671 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.4512    4.7455    2.6200 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4307    6.1489    2.0153 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4010    5.0347    1.8972 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2126    4.2183    2.7993 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4320    4.9987    0.6254 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0112    3.9358   -0.4073 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4007    4.2831   -0.9470 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0868    2.4834    0.1410 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.5259    2.1531    0.6462 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7876    0.6613    0.3572 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3950    0.0819    0.0402 C   0  0  2  0  0  0  0  0  0  0  0  0
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M  END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₀H₄₆O₄

Average Mass

470.6940 Da

Monoisotopic Mass

470.33961 Da

IUPAC Name

(1S,2R,6S,9S,10S,13S,14R,16R)-1,6,10,14-tetramethyl-9-[(2S)-6-methyl-4-oxoheptan-2-yl]-17,20-dioxapentacyclo[14.2.2.0^{2,14}.0^{5,13}.0^{6,10}]icos-4-en-18-one

Traditional Name

(1S,2R,6S,9S,10S,13S,14R,16R)-1,6,10,14-tetramethyl-9-[(2S)-6-methyl-4-oxoheptan-2-yl]-17,20-dioxapentacyclo[14.2.2.0^{2,14}.0^{5,13}.0^{6,10}]icos-4-en-18-one

CAS Registry Number

Not Available

SMILES

[H]C1=C2[C@@]([H])(C([H])([H])C([H])([H])[C@@]3(C([H])([H])[H])[C@@]([H])(C([H])([H])C([H])([H])[C@]23C([H])([H])[H])[C@@]([H])(C([H])([H])[H])C([H])([H])C(=O)C([H])([H])C([H])(C([H])([H])[H])C([H])([H])[H])[C@@]2(C([H])([H])[H])C([H])([H])[C@@]3([H])OC(=O)[C@](C([H])([H])[H])(C([H])([H])O3)[C@]2([H])C1([H])[H]

InChI Identifier

InChI=1S/C30H46O4/c1-18(2)14-20(31)15-19(3)21-10-12-30(7)23-8-9-24-27(4,22(23)11-13-29(21,30)6)16-25-33-17-28(24,5)26(32)34-25/h8,18-19,21-22,24-25H,9-17H2,1-7H3/t19-,21-,22+,24+,25+,27+,28+,29-,30+/m0/s1

InChI Key

GEHUHFZJYOZGEZ-VTBUURGSSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Aphanamixis grandifolia	JEOL database	Zeng, Q., et al, Phytochem. 80, 148 (2012)

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	5.92	ALOGPS
logP	6.38	ChemAxon
logS	-6.1	ALOGPS
pKa (Strongest Basic)	-4.3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	52.6 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	134.45 m³·mol⁻¹	ChemAxon
Polarizability	54.71 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

Not Available

References

General References

Zeng, Q., et al. (2012). Zeng, Q., et al, Phytochem. 80, 148 (2012). Phytochem..

Showing NP-Card for aphanamgrandin A (NP0041515)

MOL for NP0041515 (aphanamgrandin A)

3D MOL for NP0041515 (aphanamgrandin A)

3D SDF for NP0041515 (aphanamgrandin A)

3D-SDF for NP0041515 (aphanamgrandin A)

PDB for NP0041515 (aphanamgrandin A)

3D PDB for NP0041515 (aphanamgrandin A)

SMILES for NP0041515 (aphanamgrandin A)

INCHI for NP0041515 (aphanamgrandin A)

Structure for NP0041515 (aphanamgrandin A)

3D Structure for NP0041515 (aphanamgrandin A)