Np mrd loader

Record Information
Version2.0
Created at2021-06-20 23:23:26 UTC
Updated at2021-06-30 00:16:02 UTC
NP-MRD IDNP0041487
Secondary Accession NumbersNone
Natural Product Identification
Common Name3-O-acetylbotcineric acid methyl ester
Provided ByJEOL DatabaseJEOL Logo
Description3-O-Acetylbotocineric acid methyl ester belongs to the class of organic compounds known as tricarboxylic acids and derivatives. These are carboxylic acids containing exactly three carboxyl groups. 3-O-acetylbotcineric acid methyl ester is found in Botryotinia sp. SF-5275. 3-O-acetylbotcineric acid methyl ester was first documented in 2012 (Kim, M.-Y., et al.). Based on a literature review very few articles have been published on 3-O-Acetylbotocineric acid methyl ester.
Structure
Thumb
Synonyms
ValueSource
3-O-Acetylbotocinerate methyl esterGenerator
Chemical FormulaC25H42O9
Average Mass486.6020 Da
Monoisotopic Mass486.28288 Da
IUPAC Name(2S,3R,4S,5S,6S)-6-[(1S,2R)-1-(acetyloxy)-3-methoxy-2-methyl-3-oxopropyl]-5-hydroxy-2,4,6-trimethyloxan-3-yl (2E,4S)-4-hydroxydec-2-enoate
Traditional Name(2S,3R,4S,5S,6S)-6-[(1S,2R)-1-(acetyloxy)-3-methoxy-2-methyl-3-oxopropyl]-5-hydroxy-2,4,6-trimethyloxan-3-yl (2E,4S)-4-hydroxydec-2-enoate
CAS Registry NumberNot Available
SMILES
[H]O[C@]([H])(C(\[H])=C(/[H])C(=O)O[C@@]1([H])[C@@]([H])(O[C@](C([H])([H])[H])([C@@]([H])(OC(=O)C([H])([H])[H])[C@]([H])(C(=O)OC([H])([H])[H])C([H])([H])[H])[C@@]([H])(O[H])[C@]1([H])C([H])([H])[H])C([H])([H])[H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H]
InChI Identifier
InChI=1S/C25H42O9/c1-8-9-10-11-12-19(27)13-14-20(28)33-21-15(2)22(29)25(6,34-17(21)4)23(32-18(5)26)16(3)24(30)31-7/h13-17,19,21-23,27,29H,8-12H2,1-7H3/b14-13+/t15-,16-,17+,19+,21-,22+,23+,25+/m1/s1
InChI KeySZBRURWRIWFBQH-NORRBNSQSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 400 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 500 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 600 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Botryotinia sp. SF-5275JEOL database
    • Kim, M.-Y., et al, J. Antibiotics 65, 161 (2012)
Chemical Taxonomy
Description Belongs to the class of organic compounds known as tricarboxylic acids and derivatives. These are carboxylic acids containing exactly three carboxyl groups.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassTricarboxylic acids and derivatives
Direct ParentTricarboxylic acids and derivatives
Alternative Parents
Substituents
  • Fatty alcohol
  • Tricarboxylic acid or derivatives
  • Fatty acid ester
  • Oxane
  • Fatty acyl
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Methyl ester
  • Carboxylic acid ester
  • Secondary alcohol
  • Dialkyl ether
  • Ether
  • Oxacycle
  • Organoheterocyclic compound
  • Organic oxide
  • Alcohol
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Organic oxygen compound
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.59ALOGPS
logP3.46ChemAxon
logS-4.2ALOGPS
pKa (Strongest Acidic)13.61ChemAxon
pKa (Strongest Basic)-2.9ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area128.59 ŲChemAxon
Rotatable Bond Count15ChemAxon
Refractivity124.81 m³·mol⁻¹ChemAxon
Polarizability53.14 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID29214679
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound57337322
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Kim, M.-Y., et al. (2012). Kim, M.-Y., et al, J. Antibiotics 65, 161 (2012). J. Antibiotics.