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Record Information
Version2.0
Created at2021-06-20 23:09:16 UTC
Updated at2021-06-30 00:15:32 UTC
NP-MRD IDNP0041178
Secondary Accession NumbersNone
Natural Product Identification
Common Namezawadskinolide A
Provided ByJEOL DatabaseJEOL Logo
Description(3R,3aS,7S,9S,11aR)-7-hydroxy-10-(hydroxymethyl)-3,6-dimethyl-2-oxo-2H,3H,3aH,4H,7H,8H,9H,11aH-cyclodeca[b]furan-9-yl acetate belongs to the class of organic compounds known as germacranolides and derivatives. These are sesquiterpene lactones with a structure based on the germacranolide skeleton, characterized by a gamma lactone fused to a 1,7-dimethylcyclodec-1-ene moiety. zawadskinolide A is found in Chrysanthemum zawadskii and Dendranthema zawadskii var. latilobum. zawadskinolide A was first documented in 2012 (Shin, H. J., et al.). Based on a literature review very few articles have been published on (3R,3aS,7S,9S,11aR)-7-hydroxy-10-(hydroxymethyl)-3,6-dimethyl-2-oxo-2H,3H,3aH,4H,7H,8H,9H,11aH-cyclodeca[b]furan-9-yl acetate.
Structure
Thumb
Synonyms
ValueSource
(3R,3AS,7S,9S,11ar)-7-hydroxy-10-(hydroxymethyl)-3,6-dimethyl-2-oxo-2H,3H,3ah,4H,7H,8H,9H,11ah-cyclodeca[b]furan-9-yl acetic acidGenerator
Chemical FormulaC17H24O6
Average Mass324.3730 Da
Monoisotopic Mass324.15729 Da
IUPAC Name(3R,3aS,7S,9S,11aR)-7-hydroxy-10-(hydroxymethyl)-3,6-dimethyl-2-oxo-2H,3H,3aH,4H,7H,8H,9H,11aH-cyclodeca[b]furan-9-yl acetate
Traditional Name(3R,3aS,7S,9S,11aR)-7-hydroxy-10-(hydroxymethyl)-3,6-dimethyl-2-oxo-3H,3aH,4H,7H,8H,9H,11aH-cyclodeca[b]furan-9-yl acetate
CAS Registry NumberNot Available
SMILES
[H]OC([H])([H])C1=C([H])/[C@]2([H])OC(=O)[C@]([H])(C([H])([H])[H])[C@]2([H])C([H])([H])\C([H])=C(C([H])([H])[H])/[C@@]([H])(O[H])C([H])([H])[C@]\1([H])OC(=O)C([H])([H])[H]
InChI Identifier
InChI=1S/C17H24O6/c1-9-4-5-13-10(2)17(21)23-16(13)6-12(8-18)15(7-14(9)20)22-11(3)19/h4,6,10,13-16,18,20H,5,7-8H2,1-3H3/b9-4-,12-6-/t10-,13+,14+,15+,16+/m1/s1
InChI KeyXKDIQABGHTWXMA-SLJAUAGDSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 400 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 500 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 600 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Chrysanthemum zawadskiiLOTUS Database
Dendranthema zawadskii var. latilobumJEOL database
    • Shin, H. J., et al, Chem. Pharm. Bull. 60, 306(2012)
Chemical Taxonomy
Description Belongs to the class of organic compounds known as germacranolides and derivatives. These are sesquiterpene lactones with a structure based on the germacranolide skeleton, characterized by a gamma lactone fused to a 1,7-dimethylcyclodec-1-ene moiety.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTerpene lactones
Direct ParentGermacranolides and derivatives
Alternative Parents
Substituents
  • Germacranolide
  • Germacrane sesquiterpenoid
  • Sesquiterpenoid
  • Dicarboxylic acid or derivatives
  • Gamma butyrolactone
  • Tetrahydrofuran
  • Carboxylic acid ester
  • Secondary alcohol
  • Lactone
  • Carboxylic acid derivative
  • Oxacycle
  • Organoheterocyclic compound
  • Hydrocarbon derivative
  • Organic oxide
  • Organic oxygen compound
  • Alcohol
  • Carbonyl group
  • Primary alcohol
  • Organooxygen compound
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.83ALOGPS
logP0.3ChemAxon
logS-2.5ALOGPS
pKa (Strongest Acidic)14.42ChemAxon
pKa (Strongest Basic)-2.8ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area93.06 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity84.06 m³·mol⁻¹ChemAxon
Polarizability33.75 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound56968795
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Shin, H. J., et al. (2012). Shin, H. J., et al, Chem. Pharm. Bull. 60, 306(2012). Chem. Pharm. Bull..