Np mrd loader

Record Information
Version1.0
Created at2021-06-20 21:42:42 UTC
Updated at2021-06-30 00:12:25 UTC
NP-MRD IDNP0039215
Secondary Accession NumbersNone
Natural Product Identification
Common Nameritterazine U
Provided ByJEOL DatabaseJEOL Logo
Description(2R,2''R,3'S,3''S,3''aS,4'S,4''S,5S,6''aS,7'R,8'R,9'S,12'S,14'R,15'R,18'S,24'S,25'S,28'R,29'R,32'S)-4'',5,14'-trihydroxy-3',3'',4'',5,5''',5''',7',9',24'-nonamethyl-3''a,4'',6'',6''a-tetrahydro-3''H-trispiro[oxane-2,10'-[11]oxa-[21,35]diazanonacyclo[18.15.0.0³,¹⁸.0⁴,¹⁵.0⁷,¹⁴.0⁸,¹².0²²,³⁴.0²⁴,³².0²⁵,²⁹]Pentatriacontane-28',5''-cyclopenta[b]furan-2'',2'''-oxolane]-1'(35'),20',22'(34')-triene-6',27'-dione belongs to the class of organic compounds known as prostaglandins and related compounds. These are unsaturated carboxylic acids consisting of a 20 carbon skeleton that also contains a five member ring, and are based upon the fatty acid arachidonic acid. ritterazine U is found in Ritterella tokioka. It was first documented in 1997 (Fukuzawa, S., et al.). Based on a literature review a significant number of articles have been published on (2R,2''R,3'S,3''S,3''aS,4'S,4''S,5S,6''aS,7'R,8'R,9'S,12'S,14'R,15'R,18'S,24'S,25'S,28'R,29'R,32'S)-4'',5,14'-trihydroxy-3',3'',4'',5,5''',5''',7',9',24'-nonamethyl-3''a,4'',6'',6''a-tetrahydro-3''H-trispiro[oxane-2,10'-[11]oxa-[21,35]diazanonacyclo[18.15.0.0³,¹⁸.0⁴,¹⁵.0⁷,¹⁴.0⁸,¹².0²²,³⁴.0²⁴,³².0²⁵,²⁹]Pentatriacontane-28',5''-cyclopenta[b]furan-2'',2'''-oxolane]-1'(35'),20',22'(34')-triene-6',27'-dione.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC54H76N2O9
Average Mass897.2070 Da
Monoisotopic Mass896.55508 Da
IUPAC Name(2R,2''R,3'S,3''S,3''aS,4'S,4''S,5S,6''aS,7'R,8'R,9'S,12'S,14'R,15'R,18'S,24'S,25'S,28'R,29'R,32'S)-4'',5,14'-trihydroxy-3',3'',4'',5,5''',5''',7',9',24'-nonamethyl-3''a,4'',6'',6''a-tetrahydro-3''H-trispiro[oxane-2,10'-[11]oxa-[21,35]diazanonacyclo[18.15.0.0^{3,18}.0^{4,15}.0^{7,14}.0^{8,12}.0^{22,34}.0^{24,32}.0^{25,29}]pentatriacontane-28',5''-cyclopenta[b]furan-2'',2'''-oxolane]-1'(35'),20',22'(34')-triene-6',27'-dione
Traditional Name(2R,2''R,3'S,3''S,3''aS,4'S,4''S,5S,6''aS,7'R,8'R,9'S,12'S,14'R,15'R,18'S,24'S,25'S,28'R,29'R,32'S)-4'',5,14'-trihydroxy-3',3'',4'',5,5''',5''',7',9',24'-nonamethyl-3'',3''a,6'',6''a-tetrahydrotrispiro[oxane-2,10'-[11]oxa-[21,35]diazanonacyclo[18.15.0.0^{3,18}.0^{4,15}.0^{7,14}.0^{8,12}.0^{22,34}.0^{24,32}.0^{25,29}]pentatriacontane-28',5''-cyclopenta[b]furan-2'',2'''-oxolane]-1'(35'),20',22'(34')-triene-6',27'-dione
CAS Registry NumberNot Available
SMILES
[H]O[C@@]1(C([H])([H])[H])[C@]2([H])[C@@]([H])(O[C@]3(OC(C([H])([H])[H])(C([H])([H])[H])C([H])([H])C3([H])[H])[C@@]2([H])C([H])([H])[H])C([H])([H])[C@]11C(=O)C([H])([H])[C@@]2([H])[C@@]1([H])C([H])([H])C([H])([H])[C@@]1([H])C([H])([H])C3=C(N=C4C(=N3)C([H])([H])[C@@]3(C([H])([H])[H])[C@]([H])(C4([H])[H])C([H])([H])C([H])([H])[C@]4([H])[C@]3([H])C([H])([H])C(=O)[C@]3(C([H])([H])[H])[C@]5([H])[C@@]([H])(O[C@@]6(OC([H])([H])[C@](O[H])(C([H])([H])[H])C([H])([H])C6([H])[H])[C@@]5([H])C([H])([H])[H])C([H])([H])[C@@]43O[H])C([H])([H])[C@]21C([H])([H])[H]
InChI Identifier
InChI=1S/C54H76N2O9/c1-27-43-40(63-53(27)17-15-46(5,59)26-62-53)25-52(61)32-13-11-30-19-36-38(23-48(30,7)34(32)20-41(57)49(43,52)8)56-35-18-29-10-12-31-33(47(29,6)22-37(35)55-36)21-42(58)51(31)24-39-44(50(51,9)60)28(2)54(64-39)16-14-45(3,4)65-54/h27-34,39-40,43-44,59-61H,10-26H2,1-9H3/t27-,28-,29-,30-,31+,32+,33-,34-,39-,40-,43-,44-,46-,47-,48-,49+,50-,51-,52+,53+,54+/m0/s1
InChI KeyXCBOGMXPSZYSDQ-CZDBGKGPSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 500 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 600 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Ritterella tokiokaJEOL database
    • Fukuzawa, S., et al, J. Org. Chem. 62, 4484 (1997)
Chemical Taxonomy
Description Belongs to the class of organic compounds known as prostaglandins and related compounds. These are unsaturated carboxylic acids consisting of a 20 carbon skeleton that also contains a five member ring, and are based upon the fatty acid arachidonic acid.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassEicosanoids
Direct ParentProstaglandins and related compounds
Alternative Parents
Substituents
  • Prostaglandin skeleton
  • 14-hydroxysteroid
  • Hydroxysteroid
  • 12-oxosteroid
  • Oxosteroid
  • Steroid
  • Phenazine
  • Ketal
  • Oxane
  • Pyrazine
  • Cyclic alcohol
  • Heteroaromatic compound
  • Tetrahydrofuran
  • Tertiary alcohol
  • Ketone
  • Polyol
  • Azacycle
  • Oxacycle
  • Acetal
  • Organoheterocyclic compound
  • Hydrocarbon derivative
  • Organic oxide
  • Organooxygen compound
  • Organonitrogen compound
  • Organopnictogen compound
  • Organic oxygen compound
  • Organic nitrogen compound
  • Carbonyl group
  • Alcohol
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP5.6ALOGPS
logP5.09ChemAxon
logS-6ALOGPS
pKa (Strongest Acidic)13.58ChemAxon
pKa (Strongest Basic)1.52ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count11ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area157.53 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity241.11 m³·mol⁻¹ChemAxon
Polarizability105.9 ųChemAxon
Number of Rings13ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID8685348
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound10509947
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Fukuzawa, S., et al. (1997). Fukuzawa, S., et al, J. Org. Chem. 62, 4484 (1997). J. Org. Chem..