Np mrd loader

Record Information
Version2.0
Created at2021-06-20 21:32:52 UTC
Updated at2021-06-30 00:12:05 UTC
NP-MRD IDNP0038994
Secondary Accession NumbersNone
Natural Product Identification
Common Namemilnamide C
Provided ByJEOL DatabaseJEOL Logo
Description(+)-Milnamide C belongs to the class of organic compounds known as beta carbolines. Beta carbolines are compounds containing a 9H-pyrido[3,4-b]indole moiety. milnamide C is found in Auletta sp. milnamide C was first documented in 2004 (PMID: 14986973). Based on a literature review very few articles have been published on (+)-Milnamide C.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC31H44N4O5
Average Mass552.7160 Da
Monoisotopic Mass552.33117 Da
IUPAC Name(2E,4S)-2,5-dimethyl-4-[(2S)-N,3,3-trimethyl-2-{[(3S)-2,4,4,9-tetramethyl-1-oxo-1H,2H,3H,4H,9H-pyrido[3,4-b]indol-3-yl]formamido}butanamido]hex-2-enoic acid
Traditional Name(2E,4S)-2,5-dimethyl-4-[(2S)-N,3,3-trimethyl-2-{[(3S)-2,4,4,9-tetramethyl-1-oxo-3H-pyrido[3,4-b]indol-3-yl]formamido}butanamido]hex-2-enoic acid
CAS Registry NumberNot Available
SMILES
[H]OC(=O)C(=C(/[H])[C@@]([H])(N(C(=O)[C@@]([H])(N([H])C(=O)[C@@]1([H])N(C(=O)C2=C(C3=C(C([H])=C([H])C([H])=C3[H])N2C([H])([H])[H])C1(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C(C([H])([H])[H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])(C([H])([H])[H])C([H])([H])[H])\C([H])([H])[H]
InChI Identifier
InChI=1S/C31H44N4O5/c1-17(2)21(16-18(3)29(39)40)34(10)28(38)24(30(4,5)6)32-26(36)25-31(7,8)22-19-14-12-13-15-20(19)33(9)23(22)27(37)35(25)11/h12-17,21,24-25H,1-11H3,(H,32,36)(H,39,40)/b18-16+/t21-,24-,25-/m1/s1
InChI KeyCNCMAIYXXWHOOF-XRYGIUSTSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 500 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 600 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Auletta sp.JEOL database
    • Sonnenschein, R. N., et al, Org. Lett. 6, 779 (2004)
Chemical Taxonomy
Description Belongs to the class of organic compounds known as beta carbolines. Beta carbolines are compounds containing a 9H-pyrido[3,4-b]indole moiety.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassIndoles and derivatives
Sub ClassPyridoindoles
Direct ParentBeta carbolines
Alternative Parents
Substituents
  • Valine or derivatives
  • Beta-carboline
  • N-acyl-alpha amino acid or derivatives
  • Alpha-amino acid amide
  • Indolecarboxylic acid derivative
  • Alpha-amino acid or derivatives
  • N-alkylindole
  • 3-alkylindole
  • Indole
  • 2-heteroaryl carboxamide
  • Medium-chain fatty acid
  • Amino fatty acid
  • Branched fatty acid
  • Heterocyclic fatty acid
  • Methyl-branched fatty acid
  • Fatty acyl
  • Fatty acid
  • N-acyl-amine
  • Benzenoid
  • N-methylpyrrole
  • Substituted pyrrole
  • Unsaturated fatty acid
  • Tertiary carboxylic acid amide
  • Heteroaromatic compound
  • Pyrrole
  • Secondary carboxylic acid amide
  • Carboxamide group
  • Lactam
  • Azacycle
  • Carboxylic acid
  • Carboxylic acid derivative
  • Monocarboxylic acid or derivatives
  • Organic nitrogen compound
  • Hydrocarbon derivative
  • Organonitrogen compound
  • Organooxygen compound
  • Organic oxide
  • Carbonyl group
  • Organic oxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.4ALOGPS
logP4.21ChemAxon
logS-5ALOGPS
pKa (Strongest Acidic)4.71ChemAxon
pKa (Strongest Basic)-1.5ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area111.95 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity155.36 m³·mol⁻¹ChemAxon
Polarizability59.83 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID9596387
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound11421502
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Sonnenschein RN, Farias JJ, Tenney K, Mooberry SL, Lobkovsky E, Clardy J, Crews P: A further study of the cytotoxic constituents of a milnamide-producing sponge. Org Lett. 2004 Mar 4;6(5):779-82. doi: 10.1021/ol036446c. [PubMed:14986973 ]
  2. Sonnenschein, R. N., et al. (2004). Sonnenschein, R. N., et al, Org. Lett. 6, 779 (2004). Org. Lett..