NP-MRD: Showing NP-Card for gomerolactone D (NP0038727)

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Record Information

Version

2.0

Created at

2021-06-20 21:20:17 UTC

Updated at

2021-06-30 00:11:40 UTC

NP-MRD ID

NP0038727

Secondary Accession Numbers

None

Natural Product Identification

Common Name

gomerolactone D

Provided By

JEOL Database JEOL Logo

Description

gomerolactone D is found in Laurencia majuscula. gomerolactone D was first documented in 2009 (Diaz-Marrero, A. R., et al.).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306202123203D          

 40 42  0  0  0  0            999 V2000
   -0.5377    0.0599    0.9756 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8763    0.4276   -0.4944 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.2424   -0.2392   -0.8035 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1107    1.9595   -0.5631 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.1727    2.7486   -0.4644 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2619    3.7361    0.2626 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2953    2.3375   -1.3804 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.5581    0.8349   -1.2399 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8794    0.5113   -1.9188 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9010    1.1136   -1.5920 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9639   -0.4499   -2.8494 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8814   -1.1566   -3.5149 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5749   -1.8303   -4.7110 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8578   -0.1412   -4.0303 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.2041    0.1749   -2.9834 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.2796   -0.0241   -1.5214 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.6572   -1.5251   -1.3119 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2877   -2.1930   -2.5437 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0621   -3.2386   -3.3464 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    0.3697    0.5509    1.3366 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4139   -1.0195    1.1074 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3461    0.3685    1.6499 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6427    0.0733   -1.7731 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1832   -1.3309   -0.7967 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9921    0.0450   -0.0548 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7746    2.2813    0.2493 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5994    2.2515   -1.4995 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0444    2.6228   -2.4067 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1831    2.9164   -1.0986 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8127    0.6550   -0.1854 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1059   -1.0868   -5.3178 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8730   -2.3570   -5.3643 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3326   -2.5447   -4.3685 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3638    0.7874   -4.3240 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3477   -0.5118   -4.9284 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0578   -0.4862   -3.1755 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5785    1.1872   -3.1651 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2053   -2.1118   -0.9803 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3731   -1.5998   -0.4816 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0719   -2.8753   -2.1957 H   0  0  0  0  0  0  0  0  0  0  0  0
 16  2  1  1  0  0  0
 16  8  1  0  0  0  0
  8  7  1  0  0  0  0
 12 14  1  0  0  0  0
 14 15  1  0  0  0  0
  8  9  1  0  0  0  0
  9 11  1  0  0  0  0
  5  4  1  0  0  0  0
  9 10  2  0  0  0  0
 12 13  1  6  0  0  0
 16 17  1  0  0  0  0
  2  1  1  1  0  0  0
 16 15  1  0  0  0  0
  2  3  1  0  0  0  0
 17 18  1  0  0  0  0
  5  6  2  0  0  0  0
 18 12  1  0  0  0  0
 18 19  1  0  0  0  0
 12 11  1  0  0  0  0
  5  7  1  0  0  0  0
 18 40  1  1  0  0  0
  4  2  1  0  0  0  0
  8 30  1  1  0  0  0
 17 38  1  0  0  0  0
 17 39  1  0  0  0  0
 14 34  1  0  0  0  0
 14 35  1  0  0  0  0
 15 36  1  0  0  0  0
 15 37  1  0  0  0  0
  4 26  1  0  0  0  0
  4 27  1  0  0  0  0
  7 28  1  0  0  0  0
  7 29  1  0  0  0  0
 13 31  1  0  0  0  0
 13 32  1  0  0  0  0
 13 33  1  0  0  0  0
  1 20  1  0  0  0  0
  1 21  1  0  0  0  0
  1 22  1  0  0  0  0
  3 23  1  0  0  0  0
  3 24  1  0  0  0  0
  3 25  1  0  0  0  0
M  END

     RDKit          3D

 40 42  0  0  0  0  0  0  0  0999 V2000
   -0.5377    0.0599    0.9756 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8763    0.4276   -0.4944 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.2424   -0.2392   -0.8035 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1107    1.9595   -0.5631 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1727    2.7486   -0.4644 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2619    3.7361    0.2626 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2953    2.3375   -1.3804 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5581    0.8349   -1.2399 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8794    0.5113   -1.9188 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9010    1.1136   -1.5920 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9639   -0.4499   -2.8494 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8814   -1.1566   -3.5149 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5749   -1.8303   -4.7110 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8578   -0.1412   -4.0303 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2041    0.1749   -2.9834 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2796   -0.0241   -1.5214 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.6572   -1.5251   -1.3119 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2877   -2.1930   -2.5437 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0621   -3.2386   -3.3464 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    0.3697    0.5509    1.3366 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4139   -1.0195    1.1074 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3461    0.3685    1.6499 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6427    0.0733   -1.7731 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1832   -1.3309   -0.7967 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9921    0.0450   -0.0548 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7746    2.2813    0.2493 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5994    2.2515   -1.4995 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0444    2.6228   -2.4067 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1831    2.9164   -1.0986 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8127    0.6550   -0.1854 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1059   -1.0868   -5.3178 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8730   -2.3570   -5.3643 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3326   -2.5447   -4.3685 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3638    0.7874   -4.3240 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3477   -0.5118   -4.9284 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0578   -0.4862   -3.1755 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5785    1.1872   -3.1651 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2053   -2.1118   -0.9803 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3731   -1.5998   -0.4816 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0719   -2.8753   -2.1957 H   0  0  0  0  0  0  0  0  0  0  0  0
 16  2  1  1
 16  8  1  0
  8  7  1  0
 12 14  1  0
 14 15  1  0
  8  9  1  0
  9 11  1  0
  5  4  1  0
  9 10  2  0
 12 13  1  6
 16 17  1  0
  2  1  1  1
 16 15  1  0
  2  3  1  0
 17 18  1  0
  5  6  2  0
 18 12  1  0
 18 19  1  0
 12 11  1  0
  5  7  1  0
 18 40  1  1
  4  2  1  0
  8 30  1  1
 17 38  1  0
 17 39  1  0
 14 34  1  0
 14 35  1  0
 15 36  1  0
 15 37  1  0
  4 26  1  0
  4 27  1  0
  7 28  1  0
  7 29  1  0
 13 31  1  0
 13 32  1  0
 13 33  1  0
  1 20  1  0
  1 21  1  0
  1 22  1  0
  3 23  1  0
  3 24  1  0
  3 25  1  0
M  END


  Mrv1652306202123203D          

 40 42  0  0  0  0            999 V2000
   -0.5377    0.0599    0.9756 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8763    0.4276   -0.4944 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.2424   -0.2392   -0.8035 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1107    1.9595   -0.5631 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.1727    2.7486   -0.4644 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2619    3.7361    0.2626 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2953    2.3375   -1.3804 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.5581    0.8349   -1.2399 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8794    0.5113   -1.9188 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9010    1.1136   -1.5920 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9639   -0.4499   -2.8494 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8814   -1.1566   -3.5149 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5749   -1.8303   -4.7110 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8578   -0.1412   -4.0303 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.2041    0.1749   -2.9834 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.2796   -0.0241   -1.5214 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.6572   -1.5251   -1.3119 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2877   -2.1930   -2.5437 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0621   -3.2386   -3.3464 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    0.3697    0.5509    1.3366 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4139   -1.0195    1.1074 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3461    0.3685    1.6499 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6427    0.0733   -1.7731 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1832   -1.3309   -0.7967 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9921    0.0450   -0.0548 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7746    2.2813    0.2493 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5994    2.2515   -1.4995 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0444    2.6228   -2.4067 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1831    2.9164   -1.0986 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8127    0.6550   -0.1854 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1059   -1.0868   -5.3178 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8730   -2.3570   -5.3643 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3326   -2.5447   -4.3685 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3638    0.7874   -4.3240 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3477   -0.5118   -4.9284 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0578   -0.4862   -3.1755 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5785    1.1872   -3.1651 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2053   -2.1118   -0.9803 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3731   -1.5998   -0.4816 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0719   -2.8753   -2.1957 H   0  0  0  0  0  0  0  0  0  0  0  0
 16  2  1  1  0  0  0
 16  8  1  0  0  0  0
  8  7  1  0  0  0  0
 12 14  1  0  0  0  0
 14 15  1  0  0  0  0
  8  9  1  0  0  0  0
  9 11  1  0  0  0  0
  5  4  1  0  0  0  0
  9 10  2  0  0  0  0
 12 13  1  6  0  0  0
 16 17  1  0  0  0  0
  2  1  1  1  0  0  0
 16 15  1  0  0  0  0
  2  3  1  0  0  0  0
 17 18  1  0  0  0  0
  5  6  2  0  0  0  0
 18 12  1  0  0  0  0
 18 19  1  0  0  0  0
 12 11  1  0  0  0  0
  5  7  1  0  0  0  0
 18 40  1  1  0  0  0
  4  2  1  0  0  0  0
  8 30  1  1  0  0  0
 17 38  1  0  0  0  0
 17 39  1  0  0  0  0
 14 34  1  0  0  0  0
 14 35  1  0  0  0  0
 15 36  1  0  0  0  0
 15 37  1  0  0  0  0
  4 26  1  0  0  0  0
  4 27  1  0  0  0  0
  7 28  1  0  0  0  0
  7 29  1  0  0  0  0
 13 31  1  0  0  0  0
 13 32  1  0  0  0  0
 13 33  1  0  0  0  0
  1 20  1  0  0  0  0
  1 21  1  0  0  0  0
  1 22  1  0  0  0  0
  3 23  1  0  0  0  0
  3 24  1  0  0  0  0
  3 25  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0038727

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]C([H])([H])[C@@]12OC(=O)[C@@]3([H])C([H])([H])C(=O)C([H])([H])C(C([H])([H])[H])(C([H])([H])[H])[C@]3(C([H])([H])C1([H])[H])C([H])([H])[C@@]2([H])Cl

> <INCHI_IDENTIFIER>
InChI=1S/C15H21ClO3/c1-13(2)7-9(17)6-10-12(18)19-14(3)4-5-15(10,13)8-11(14)16/h10-11H,4-8H2,1-3H3/t10-,11-,14-,15-/m1/s1

> <INCHI_KEY>
VTUJLRHZGOPGRK-YIKOMLBNSA-N

> <FORMULA>
C15H21ClO3

> <MOLECULAR_WEIGHT>
284.78

> <EXACT_MASS>
284.1179222

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
40

> <JCHEM_AVERAGE_POLARIZABILITY>
29.190461327199873

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,6S,9R,10R)-10-chloro-2,2,9-trimethyl-8-oxatricyclo[7.2.2.0^{1,6}]tridecane-4,7-dione

> <ALOGPS_LOGP>
2.89

> <JCHEM_LOGP>
2.5930688179999994

> <ALOGPS_LOGS>
-4.17

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
17.114209487453525

> <JCHEM_PKA_STRONGEST_BASIC>
-6.9161264744369

> <JCHEM_POLAR_SURFACE_AREA>
43.370000000000005

> <JCHEM_REFRACTIVITY>
71.76350000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.93e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,6S,9R,10R)-10-chloro-2,2,9-trimethyl-8-oxatricyclo[7.2.2.0^{1,6}]tridecane-4,7-dione

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 40 42  0  0  0  0  0  0  0  0999 V2000
   -0.5377    0.0599    0.9756 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8763    0.4276   -0.4944 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.2424   -0.2392   -0.8035 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1107    1.9595   -0.5631 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1727    2.7486   -0.4644 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2619    3.7361    0.2626 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2953    2.3375   -1.3804 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5581    0.8349   -1.2399 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8794    0.5113   -1.9188 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9010    1.1136   -1.5920 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9639   -0.4499   -2.8494 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8814   -1.1566   -3.5149 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5749   -1.8303   -4.7110 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8578   -0.1412   -4.0303 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2041    0.1749   -2.9834 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2796   -0.0241   -1.5214 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.6572   -1.5251   -1.3119 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2877   -2.1930   -2.5437 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0621   -3.2386   -3.3464 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    0.3697    0.5509    1.3366 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4139   -1.0195    1.1074 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3461    0.3685    1.6499 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6427    0.0733   -1.7731 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1832   -1.3309   -0.7967 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9921    0.0450   -0.0548 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7746    2.2813    0.2493 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5994    2.2515   -1.4995 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0444    2.6228   -2.4067 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1831    2.9164   -1.0986 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8127    0.6550   -0.1854 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1059   -1.0868   -5.3178 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8730   -2.3570   -5.3643 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3326   -2.5447   -4.3685 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3638    0.7874   -4.3240 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3477   -0.5118   -4.9284 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0578   -0.4862   -3.1755 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5785    1.1872   -3.1651 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2053   -2.1118   -0.9803 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3731   -1.5998   -0.4816 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0719   -2.8753   -2.1957 H   0  0  0  0  0  0  0  0  0  0  0  0
 16  2  1  1
 16  8  1  0
  8  7  1  0
 12 14  1  0
 14 15  1  0
  8  9  1  0
  9 11  1  0
  5  4  1  0
  9 10  2  0
 12 13  1  6
 16 17  1  0
  2  1  1  1
 16 15  1  0
  2  3  1  0
 17 18  1  0
  5  6  2  0
 18 12  1  0
 18 19  1  0
 12 11  1  0
  5  7  1  0
 18 40  1  1
  4  2  1  0
  8 30  1  1
 17 38  1  0
 17 39  1  0
 14 34  1  0
 14 35  1  0
 15 36  1  0
 15 37  1  0
  4 26  1  0
  4 27  1  0
  7 28  1  0
  7 29  1  0
 13 31  1  0
 13 32  1  0
 13 33  1  0
  1 20  1  0
  1 21  1  0
  1 22  1  0
  3 23  1  0
  3 24  1  0
  3 25  1  0
M  END

HEADER    PROTEIN                                 20-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   20-JUN-21         0                                  
HETATM    1  C   UNK     0      -0.538   0.060   0.976  0.00  0.00           C+0
HETATM    2  C   UNK     0      -0.876   0.428  -0.494  0.00  0.00           C+0
HETATM    3  C   UNK     0      -2.242  -0.239  -0.804  0.00  0.00           C+0
HETATM    4  C   UNK     0      -1.111   1.960  -0.563  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.173   2.749  -0.464  0.00  0.00           C+0
HETATM    6  O   UNK     0       0.262   3.736   0.263  0.00  0.00           O+0
HETATM    7  C   UNK     0       1.295   2.337  -1.380  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.558   0.835  -1.240  0.00  0.00           C+0
HETATM    9  C   UNK     0       2.879   0.511  -1.919  0.00  0.00           C+0
HETATM   10  O   UNK     0       3.901   1.114  -1.592  0.00  0.00           O+0
HETATM   11  O   UNK     0       2.964  -0.450  -2.849  0.00  0.00           O+0
HETATM   12  C   UNK     0       1.881  -1.157  -3.515  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.575  -1.830  -4.711  0.00  0.00           C+0
HETATM   14  C   UNK     0       0.858  -0.141  -4.030  0.00  0.00           C+0
HETATM   15  C   UNK     0      -0.204   0.175  -2.983  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.280  -0.024  -1.521  0.00  0.00           C+0
HETATM   17  C   UNK     0       0.657  -1.525  -1.312  0.00  0.00           C+0
HETATM   18  C   UNK     0       1.288  -2.193  -2.544  0.00  0.00           C+0
HETATM   19 Cl   UNK     0       0.062  -3.239  -3.346  0.00  0.00          Cl+0
HETATM   20  H   UNK     0       0.370   0.551   1.337  0.00  0.00           H+0
HETATM   21  H   UNK     0      -0.414  -1.020   1.107  0.00  0.00           H+0
HETATM   22  H   UNK     0      -1.346   0.369   1.650  0.00  0.00           H+0
HETATM   23  H   UNK     0      -2.643   0.073  -1.773  0.00  0.00           H+0
HETATM   24  H   UNK     0      -2.183  -1.331  -0.797  0.00  0.00           H+0
HETATM   25  H   UNK     0      -2.992   0.045  -0.055  0.00  0.00           H+0
HETATM   26  H   UNK     0      -1.775   2.281   0.249  0.00  0.00           H+0
HETATM   27  H   UNK     0      -1.599   2.252  -1.500  0.00  0.00           H+0
HETATM   28  H   UNK     0       1.044   2.623  -2.407  0.00  0.00           H+0
HETATM   29  H   UNK     0       2.183   2.916  -1.099  0.00  0.00           H+0
HETATM   30  H   UNK     0       1.813   0.655  -0.185  0.00  0.00           H+0
HETATM   31  H   UNK     0       3.106  -1.087  -5.318  0.00  0.00           H+0
HETATM   32  H   UNK     0       1.873  -2.357  -5.364  0.00  0.00           H+0
HETATM   33  H   UNK     0       3.333  -2.545  -4.369  0.00  0.00           H+0
HETATM   34  H   UNK     0       1.364   0.787  -4.324  0.00  0.00           H+0
HETATM   35  H   UNK     0       0.348  -0.512  -4.928  0.00  0.00           H+0
HETATM   36  H   UNK     0      -1.058  -0.486  -3.176  0.00  0.00           H+0
HETATM   37  H   UNK     0      -0.579   1.187  -3.165  0.00  0.00           H+0
HETATM   38  H   UNK     0      -0.205  -2.112  -0.980  0.00  0.00           H+0
HETATM   39  H   UNK     0       1.373  -1.600  -0.482  0.00  0.00           H+0
HETATM   40  H   UNK     0       2.072  -2.875  -2.196  0.00  0.00           H+0
CONECT    1    2   20   21   22                                             
CONECT    2   16    1    3    4                                             
CONECT    3    2   23   24   25                                             
CONECT    4    5    2   26   27                                             
CONECT    5    4    6    7                                                  
CONECT    6    5                                                            
CONECT    7    8    5   28   29                                             
CONECT    8   16    7    9   30                                             
CONECT    9    8   11   10                                                  
CONECT   10    9                                                            
CONECT   11    9   12                                                       
CONECT   12   14   13   18   11                                             
CONECT   13   12   31   32   33                                             
CONECT   14   12   15   34   35                                             
CONECT   15   14   16   36   37                                             
CONECT   16    2    8   17   15                                             
CONECT   17   16   18   38   39                                             
CONECT   18   17   12   19   40                                             
CONECT   19   18                                                            
CONECT   20    1                                                            
CONECT   21    1                                                            
CONECT   22    1                                                            
CONECT   23    3                                                            
CONECT   24    3                                                            
CONECT   25    3                                                            
CONECT   26    4                                                            
CONECT   27    4                                                            
CONECT   28    7                                                            
CONECT   29    7                                                            
CONECT   30    8                                                            
CONECT   31   13                                                            
CONECT   32   13                                                            
CONECT   33   13                                                            
CONECT   34   14                                                            
CONECT   35   14                                                            
CONECT   36   15                                                            
CONECT   37   15                                                            
CONECT   38   17                                                            
CONECT   39   17                                                            
CONECT   40   18                                                            
MASTER        0    0    0    0    0    0    0    0   40    0   84    0
END

RDKit          3D

40 42  0  0  0  0  0  0  0  0999 V2000
   -0.5377    0.0599    0.9756 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8763    0.4276   -0.4944 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.2424   -0.2392   -0.8035 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1107    1.9595   -0.5631 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1727    2.7486   -0.4644 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2619    3.7361    0.2626 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2953    2.3375   -1.3804 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5581    0.8349   -1.2399 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8794    0.5113   -1.9188 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9010    1.1136   -1.5920 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9639   -0.4499   -2.8494 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8814   -1.1566   -3.5149 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5749   -1.8303   -4.7110 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8578   -0.1412   -4.0303 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2041    0.1749   -2.9834 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2796   -0.0241   -1.5214 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.6572   -1.5251   -1.3119 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2877   -2.1930   -2.5437 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0621   -3.2386   -3.3464 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    0.3697    0.5509    1.3366 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4139   -1.0195    1.1074 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3461    0.3685    1.6499 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6427    0.0733   -1.7731 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1832   -1.3309   -0.7967 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9921    0.0450   -0.0548 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7746    2.2813    0.2493 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5994    2.2515   -1.4995 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0444    2.6228   -2.4067 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1831    2.9164   -1.0986 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8127    0.6550   -0.1854 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1059   -1.0868   -5.3178 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8730   -2.3570   -5.3643 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3326   -2.5447   -4.3685 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3638    0.7874   -4.3240 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3477   -0.5118   -4.9284 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0578   -0.4862   -3.1755 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5785    1.1872   -3.1651 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2053   -2.1118   -0.9803 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3731   -1.5998   -0.4816 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0719   -2.8753   -2.1957 H   0  0  0  0  0  0  0  0  0  0  0  0
 16  2  1  1
 16  8  1  0
  8  7  1  0
 12 14  1  0
 14 15  1  0
  8  9  1  0
  9 11  1  0
  5  4  1  0
  9 10  2  0
 12 13  1  6
 16 17  1  0
  2  1  1  1
 16 15  1  0
  2  3  1  0
 17 18  1  0
  5  6  2  0
 18 12  1  0
 18 19  1  0
 12 11  1  0
  5  7  1  0
 18 40  1  1
  4  2  1  0
  8 30  1  1
 17 38  1  0
 17 39  1  0
 14 34  1  0
 14 35  1  0
 15 36  1  0
 15 37  1  0
  4 26  1  0
  4 27  1  0
  7 28  1  0
  7 29  1  0
 13 31  1  0
 13 32  1  0
 13 33  1  0
  1 20  1  0
  1 21  1  0
  1 22  1  0
  3 23  1  0
  3 24  1  0
  3 25  1  0
M  END

View in JSmol View DFT Assignments 3D Conformers

Synonyms

Not Available

Chemical Formula

C₁₅H₂₁ClO₃

Average Mass

284.7800 Da

Monoisotopic Mass

284.11792 Da

IUPAC Name

(1R,6S,9R,10R)-10-chloro-2,2,9-trimethyl-8-oxatricyclo[7.2.2.0^{1,6}]tridecane-4,7-dione

Traditional Name

(1R,6S,9R,10R)-10-chloro-2,2,9-trimethyl-8-oxatricyclo[7.2.2.0^{1,6}]tridecane-4,7-dione

CAS Registry Number

Not Available

SMILES

[H]C([H])([H])[C@@]12OC(=O)[C@@]3([H])C([H])([H])C(=O)C([H])([H])C(C([H])([H])[H])(C([H])([H])[H])[C@]3(C([H])([H])C1([H])[H])C([H])([H])[C@@]2([H])Cl

InChI Identifier

InChI=1S/C15H21ClO3/c1-13(2)7-9(17)6-10-12(18)19-14(3)4-5-15(10,13)8-11(14)16/h10-11H,4-8H2,1-3H3/t10-,11-,14-,15-/m1/s1

InChI Key

VTUJLRHZGOPGRK-YIKOMLBNSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 125 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 150 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 175 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 225 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 250 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Laurencia majuscula	JEOL database	Diaz-Marrero, A. R., et al, EurJ. Org. Chem. 2009, 1407.

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.89	ALOGPS
logP	2.59	ChemAxon
logS	-4.2	ALOGPS
pKa (Strongest Acidic)	17.11	ChemAxon
pKa (Strongest Basic)	-6.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	43.37 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	71.76 m³·mol⁻¹	ChemAxon
Polarizability	29.19 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

Not Available

References

General References

Diaz-Marrero, A. R., et al. (2009). Diaz-Marrero, A. R., et al, EurJ. Org. Chem. 2009, 1407.. Eur. J. Org. Chem..

Showing NP-Card for gomerolactone D (NP0038727)

MOL for NP0038727 (gomerolactone D)

3D MOL for NP0038727 (gomerolactone D)

3D SDF for NP0038727 (gomerolactone D)

3D-SDF for NP0038727 (gomerolactone D)

PDB for NP0038727 (gomerolactone D)

3D PDB for NP0038727 (gomerolactone D)

SMILES for NP0038727 (gomerolactone D)

INCHI for NP0038727 (gomerolactone D)

Structure for NP0038727 (gomerolactone D)

3D Structure for NP0038727 (gomerolactone D)