Np mrd loader

Record Information
Version2.0
Created at2021-06-20 20:28:45 UTC
Updated at2021-06-30 00:09:52 UTC
NP-MRD IDNP0037589
Secondary Accession NumbersNone
Natural Product Identification
Common Namecodonopyrrolidium A
Provided ByJEOL DatabaseJEOL Logo
Description(2R)-1,1-Dimethyl-2alpha-(hydroxymethyl)-3beta-(3-methyl-2-butenoyloxy)-4alpha-hydroxy-5beta-(4-methoxyphenyl)pyrrolidine-1-ium belongs to the class of organic compounds known as phenylpyrrolidines. These are polycyclic aromatic compounds containing a benzene ring linked to a pyrrolidine ring through a CC or CN bond. Pyrrolidine is a five-membered saturated aliphatic heterocycle with one nitrogen atom and four carbon atoms. codonopyrrolidium A is found in Codonopsis pilosula and Codonopsis tangshen. codonopyrrolidium A was first documented in 2008 (Tsai, T.-H., et al.). Based on a literature review very few articles have been published on (2R)-1,1-Dimethyl-2alpha-(hydroxymethyl)-3beta-(3-methyl-2-butenoyloxy)-4alpha-hydroxy-5beta-(4-methoxyphenyl)pyrrolidine-1-ium.
Structure
Thumb
Synonyms
ValueSource
(2R)-1,1-Dimethyl-2a-(hydroxymethyl)-3b-(3-methyl-2-butenoyloxy)-4a-hydroxy-5b-(4-methoxyphenyl)pyrrolidine-1-iumGenerator
(2R)-1,1-Dimethyl-2α-(hydroxymethyl)-3β-(3-methyl-2-butenoyloxy)-4α-hydroxy-5β-(4-methoxyphenyl)pyrrolidine-1-iumGenerator
Chemical FormulaC19H28NO5
Average Mass350.4340 Da
Monoisotopic Mass350.19620 Da
IUPAC Name(2R,3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)-2-(4-methoxyphenyl)-1,1-dimethyl-4-[(3-methylbut-2-enoyl)oxy]pyrrolidin-1-ium
Traditional Name(2R,3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)-2-(4-methoxyphenyl)-1,1-dimethyl-4-[(3-methylbut-2-enoyl)oxy]pyrrolidin-1-ium
CAS Registry NumberNot Available
SMILES
[H]OC([H])([H])[C@]1([H])[C@@]([H])(OC(=O)C([H])=C(C([H])([H])[H])C([H])([H])[H])[C@]([H])(O[H])[C@@]([H])(C2=C([H])C([H])=C(OC([H])([H])[H])C([H])=C2[H])[N+]1(C([H])([H])[H])C([H])([H])[H]
InChI Identifier
InChI=1S/C19H28NO5/c1-12(2)10-16(22)25-19-15(11-21)20(3,4)17(18(19)23)13-6-8-14(24-5)9-7-13/h6-10,15,17-19,21,23H,11H2,1-5H3/q+1/t15-,17-,18-,19-/m1/s1
InChI KeyJQGUPZMVAIXFHM-NXWXRZEISA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 500 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 600 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Codonopsis pilosulaLOTUS Database
Codonopsis pilosula subsp. tangshenJEOL database
    • Tsai, T.-H., et al, Chem. Pharm. Bull. 56, 1546 (2008)
Chemical Taxonomy
Description Belongs to the class of organic compounds known as phenylpyrrolidines. These are polycyclic aromatic compounds containing a benzene ring linked to a pyrrolidine ring through a CC or CN bond. Pyrrolidine is a five-membered saturated aliphatic heterocycle with one nitrogen atom and four carbon atoms.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassPyrrolidines
Sub ClassPhenylpyrrolidines
Direct ParentPhenylpyrrolidines
Alternative Parents
Substituents
  • 2-phenylpyrrolidine
  • Phenoxy compound
  • Anisole
  • Phenol ether
  • Methoxybenzene
  • Alkyl aryl ether
  • Fatty acid ester
  • Aralkylamine
  • Monocyclic benzene moiety
  • Fatty acyl
  • Benzenoid
  • N-alkylpyrrolidine
  • Tetraalkylammonium salt
  • Pyrrole
  • Quaternary ammonium salt
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Secondary alcohol
  • Carboxylic acid ester
  • 1,2-aminoalcohol
  • Carboxylic acid derivative
  • Azacycle
  • Ether
  • Monocarboxylic acid or derivatives
  • Organic oxygen compound
  • Amine
  • Organonitrogen compound
  • Organooxygen compound
  • Hydrocarbon derivative
  • Primary alcohol
  • Carbonyl group
  • Organic oxide
  • Organic nitrogen compound
  • Alcohol
  • Organic cation
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.7ALOGPS
logP-2.3ChemAxon
logS-4.2ALOGPS
pKa (Strongest Acidic)11.98ChemAxon
pKa (Strongest Basic)-3.4ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area75.99 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity106.32 m³·mol⁻¹ChemAxon
Polarizability39.01 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID28285704
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound25130788
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Tsai, T.-H., et al. (2008). Tsai, T.-H., et al, Chem. Pharm. Bull. 56, 1546 (2008). Chem. Pharm. Bull..