Np mrd loader

Record Information
Version2.0
Created at2021-06-20 20:08:38 UTC
Updated at2021-06-30 00:09:11 UTC
NP-MRD IDNP0037155
Secondary Accession NumbersNone
Natural Product Identification
Common Nameneamphamide D
Provided ByJEOL DatabaseJEOL Logo
Description neamphamide D is found in Neamphius huxleyi. neamphamide D was first documented in 2012 (Tran, T. D., et al.).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC72H121N19O21
Average Mass1588.8720 Da
Monoisotopic Mass1587.89844 Da
IUPAC Name(2S,3S,4R)-N-[(3R,4R,7R,10R,13S,16S,19R,25aS)-10-(3-carbamimidamidopropyl)-16-(2-carbamoylethyl)-7-[(1R)-1-hydroxyethyl]-19-[(R)-(4-hydroxyphenyl)(methoxy)methyl]-3,15-dimethyl-13-(2-methylpropyl)-1,5,8,11,14,17,20-heptaoxo-tetracosahydropyrido[2,1-c]1-oxa-4,7,10,13,16,19-hexaazacyclodocosan-4-yl]-2-[(2R,3R,4S)-7-carbamimidamido-4-[(2S)-3-carbamoyl-2-[(2R,3R,4R,6R)-3-hydroxy-2,4,6-trimethyloctanamido]propanamido]-2,3-dihydroxyheptanamido]-3,4-dimethylpentanediamide
Traditional Name(2S,3S,4R)-N-[(3R,4R,7R,10R,13S,16S,19R,25aS)-10-(3-carbamimidamidopropyl)-16-(2-carbamoylethyl)-7-[(1R)-1-hydroxyethyl]-19-[(R)-(4-hydroxyphenyl)(methoxy)methyl]-3,15-dimethyl-13-(2-methylpropyl)-1,5,8,11,14,17,20-heptaoxo-hexadecahydropyrido[2,1-c]1-oxa-4,7,10,13,16,19-hexaazacyclodocosan-4-yl]-2-[(2R,3R,4S)-7-carbamimidamido-4-[(2S)-3-carbamoyl-2-[(2R,3R,4R,6R)-3-hydroxy-2,4,6-trimethyloctanamido]propanamido]-2,3-dihydroxyheptanamido]-3,4-dimethylpentanediamide
CAS Registry NumberNot Available
SMILES
[H]OC1=C([H])C([H])=C(C([H])=C1[H])[C@@]([H])(OC([H])([H])[H])[C@@]1([H])N([H])C(=O)[C@@]([H])(N(C(=O)[C@@]([H])(N([H])C(=O)[C@]([H])(N([H])C(=O)[C@]([H])(N([H])C(=O)[C@]([H])(N([H])C(=O)[C@@]([H])(N([H])C(=O)[C@]([H])(O[H])[C@]([H])(O[H])[C@@]([H])(N([H])C(=O)[C@@]([H])(N([H])C(=O)[C@]([H])(C([H])([H])[H])[C@]([H])(O[H])[C@]([H])(C([H])([H])[H])C([H])([H])[C@]([H])(C([H])([H])[H])C([H])([H])C([H])([H])[H])C([H])([H])C(=O)N([H])[H])C([H])([H])C([H])([H])C([H])([H])N([H])C(=N[H])N([H])[H])[C@@]([H])(C([H])([H])[H])[C@]([H])(C(=O)N([H])[H])C([H])([H])[H])[C@]([H])(OC(=O)[C@@]2([H])N(C1=O)C([H])([H])C([H])([H])C([H])([H])C2([H])[H])C([H])([H])[H])[C@]([H])(O[H])C([H])([H])[H])C([H])([H])C([H])([H])C([H])([H])N([H])C(=N[H])N([H])[H])C([H])([H])C([H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])([H])C([H])([H])C(=O)N([H])[H]
InChI Identifier
InChI=1S/C72H121N19O21/c1-13-34(4)31-35(5)55(96)38(8)60(100)84-45(32-50(74)95)62(102)82-43(18-16-27-80-71(76)77)56(97)57(98)67(107)86-51(36(6)37(7)59(75)99)64(104)88-53-40(10)112-70(110)48-20-14-15-29-91(48)69(109)54(58(111-12)41-21-23-42(93)24-22-41)89-63(103)47(25-26-49(73)94)90(11)68(108)46(30-33(2)3)85-61(101)44(19-17-28-81-72(78)79)83-65(105)52(39(9)92)87-66(53)106/h21-24,33-40,43-48,51-58,92-93,96-98H,13-20,25-32H2,1-12H3,(H2,73,94)(H2,74,95)(H2,75,99)(H,82,102)(H,83,105)(H,84,100)(H,85,101)(H,86,107)(H,87,106)(H,88,104)(H,89,103)(H4,76,77,80)(H4,78,79,81)/t34-,35-,36+,37-,38-,39-,40-,43+,44-,45+,46+,47+,48+,51+,52-,53-,54-,55-,56-,57-,58-/m1/s1
InChI KeyNEHMZKRNSNLPQP-XCMUBOCLSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 600 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 500 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Neamphius huxleyiJEOL database
    • Tran, T. D., et al, J. Nat. Prod. 75, 2200 (2012)
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-7.2ChemAxon
pKa (Strongest Acidic)9.46ChemAxon
pKa (Strongest Basic)11.94ChemAxon
Physiological Charge2ChemAxon
Hydrogen Acceptor Count26ChemAxon
Hydrogen Donor Count22ChemAxon
Polar Surface Area663.17 ŲChemAxon
Rotatable Bond Count37ChemAxon
Refractivity421.12 m³·mol⁻¹ChemAxon
Polarizability162.48 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
External LinksNot Available
References
General References
  1. Tran, T. D., et al. (2012). Tran, T. D., et al, J. Nat. Prod. 75, 2200 (2012). J. Nat. Prod..