NP-MRD: Showing NP-Card for melodinine F (NP0035002)

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Record Information

Version

2.0

Created at

2021-06-20 18:34:16 UTC

Updated at

2026-02-13 08:02:02 UTC

NP-MRD ID

NP0035002

Natural Product DOI

https://doi.org/10.57994/6621

Secondary Accession Numbers

None

Natural Product Identification

Common Name

melodinine F

Provided By

JEOL Database JEOL Logo

Description

melodinine F is found in Melodinus henryi. melodinine F was first documented in 2010 (PMID: 20041704).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306202120343D          

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M  CHG  2   7   1   8  -1
M  END

     RDKit          3D

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M  CHG  2   7   1   8  -1
M  END


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   -2.1559   -1.6674   -2.4376 H   0  0  0  0  0  0  0  0  0  0  0  0
 13 20  1  0  0  0  0
 20 23  1  0  0  0  0
 23  3  1  0  0  0  0
 17 18  1  0  0  0  0
 20 21  1  0  0  0  0
 11 10  1  0  0  0  0
 16 15  1  0  0  0  0
 15 14  2  0  0  0  0
 24  3  1  0  0  0  0
 19 18  2  0  0  0  0
 11 12  2  0  0  0  0
 17 16  2  0  0  0  0
  7  9  1  0  0  0  0
  9 10  1  0  0  0  0
 12 13  1  0  0  0  0
 24  7  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  6  0  0  0
 19 14  1  0  0  0  0
 21 22  1  0  0  0  0
 14 13  1  0  0  0  0
 24 50  1  6  0  0  0
 11 19  1  0  0  0  0
  3  2  1  6  0  0  0
 12 24  1  0  0  0  0
  2  1  1  0  0  0  0
 17 42  1  0  0  0  0
 16 41  1  0  0  0  0
 15 40  1  0  0  0  0
 18 43  1  0  0  0  0
  9 36  1  0  0  0  0
  9 37  1  0  0  0  0
 20 44  1  6  0  0  0
 23 48  1  0  0  0  0
 23 49  1  0  0  0  0
 10 38  1  0  0  0  0
 10 39  1  0  0  0  0
  4 30  1  0  0  0  0
  4 31  1  0  0  0  0
  5 32  1  0  0  0  0
  5 33  1  0  0  0  0
  6 34  1  0  0  0  0
  6 35  1  0  0  0  0
 22 45  1  0  0  0  0
 22 46  1  0  0  0  0
 22 47  1  0  0  0  0
  2 28  1  0  0  0  0
  2 29  1  0  0  0  0
  1 25  1  0  0  0  0
  1 26  1  0  0  0  0
  1 27  1  0  0  0  0
M  CHG  2   7   1   8  -1
M  END
> <DATABASE_ID>
NP0035002

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]C1=C([H])C([H])=C2C(=C1[H])N1C3=C2C([H])([H])C([H])([H])[N@@+]2([O-])C([H])([H])C([H])([H])C([H])([H])[C@@](C([H])([H])C([H])([H])[H])(C([H])([H])[C@@]1([H])OC([H])([H])[H])[C@@]32[H]

> <INCHI_IDENTIFIER>
InChI=1S/C20H26N2O2/c1-3-20-10-6-11-22(23)12-9-15-14-7-4-5-8-16(14)21(17(13-20)24-2)18(15)19(20)22/h4-5,7-8,17,19H,3,6,9-13H2,1-2H3/t17-,19-,20+,22+/m1/s1

> <INCHI_KEY>
KFAHAKAGWDLBIH-PBVWOCPUSA-N

> <FORMULA>
C20H26N2O2

> <MOLECULAR_WEIGHT>
326.44

> <EXACT_MASS>
326.199428085

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
50

> <JCHEM_AVERAGE_POLARIZABILITY>
37.18372816303818

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(11S,15S,17R,19S)-15-ethyl-17-methoxy-1,11-diazapentacyclo[9.6.2.0^{2,7}.0^{8,18}.0^{15,19}]nonadeca-2,4,6,8(18)-tetraen-11-ium-11-olate

> <ALOGPS_LOGP>
1.93

> <JCHEM_LOGP>
2.746938844333334

> <ALOGPS_LOGS>
-4.54

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
3.1968532403666483

> <JCHEM_POLAR_SURFACE_AREA>
37.22

> <JCHEM_REFRACTIVITY>
95.25869999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
9.40e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(11S,15S,17R,19S)-15-ethyl-17-methoxy-1,11-diazapentacyclo[9.6.2.0^{2,7}.0^{8,18}.0^{15,19}]nonadeca-2,4,6,8(18)-tetraen-11-ium-11-olate

> <JCHEM_VEBER_RULE>
1

$$$$

     RDKit          3D

 50 54  0  0  0  0  0  0  0  0999 V2000
   -4.4614    0.7227   -0.0279 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8750   -0.4387   -0.8269 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4496   -0.9347   -0.3989 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.4850   -1.5541    1.0218 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2405   -2.8830    1.0693 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6471   -3.8906    0.0921 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6520   -3.3802   -1.3342 N   0  0  2  0  0  4  0  0  0  0  0  0
   -3.9572   -3.2954   -1.7800 O   0  0  0  0  0  1  0  0  0  0  0  0
   -1.9418   -4.3725   -2.2700 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4448   -4.6015   -2.0114 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2443   -3.3391   -1.6363 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4534   -2.1957   -1.3261 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4242   -1.2586   -0.8638 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.7160   -1.7338   -0.9913 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9526   -1.1366   -0.6997 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1126   -1.8899   -0.9029 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0446   -3.1985   -1.3715 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8089   -3.7910   -1.6513 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6248   -3.0499   -1.4668 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0171    0.0051   -0.2582 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.3155   -0.0720    1.1395 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6967    1.1790    1.6929 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4817    0.2995   -0.4650 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9373   -2.0088   -1.4150 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.8823    1.6408   -0.1581 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4773    0.9330   -0.3799 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5265    0.4942    1.0387 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6025   -1.2517   -0.7690 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8467   -0.1351   -1.8816 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4696   -1.7503    1.3819 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9235   -0.8569    1.7432 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3037   -2.7270    0.8600 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1823   -3.2929    2.0843 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2308   -4.8180    0.0859 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6153   -4.1260    0.3665 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5008   -5.3135   -2.2066 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0903   -3.9572   -3.2758 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0160   -5.0419   -2.9026 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3222   -5.3248   -1.1964 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0170   -0.1238   -0.3170 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0818   -1.4482   -0.6831 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9586   -3.7688   -1.5170 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7671   -4.8147   -2.0109 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6203    0.7860   -0.7393 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0958    1.9221    1.5686 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6215    1.5357    1.2296 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8774    1.0397    2.7622 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7957    1.0510    0.2671 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5914    0.7557   -1.4590 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1559   -1.6674   -2.4376 H   0  0  0  0  0  0  0  0  0  0  0  0
 13 20  1  0
 20 23  1  0
 23  3  1  0
 17 18  1  0
 20 21  1  0
 11 10  1  0
 16 15  1  0
 15 14  2  0
 24  3  1  0
 19 18  2  0
 11 12  2  0
 17 16  2  0
  7  9  1  0
  9 10  1  0
 12 13  1  0
 24  7  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  6
 19 14  1  0
 21 22  1  0
 14 13  1  0
 24 50  1  6
 11 19  1  0
  3  2  1  6
 12 24  1  0
  2  1  1  0
 17 42  1  0
 16 41  1  0
 15 40  1  0
 18 43  1  0
  9 36  1  0
  9 37  1  0
 20 44  1  6
 23 48  1  0
 23 49  1  0
 10 38  1  0
 10 39  1  0
  4 30  1  0
  4 31  1  0
  5 32  1  0
  5 33  1  0
  6 34  1  0
  6 35  1  0
 22 45  1  0
 22 46  1  0
 22 47  1  0
  2 28  1  0
  2 29  1  0
  1 25  1  0
  1 26  1  0
  1 27  1  0
M  CHG  2   7   1   8  -1
M  END

HEADER    PROTEIN                                 20-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   20-JUN-21         0                                  
HETATM    1  C   UNK     0      -4.461   0.723  -0.028  0.00  0.00           C+0
HETATM    2  C   UNK     0      -3.875  -0.439  -0.827  0.00  0.00           C+0
HETATM    3  C   UNK     0      -2.450  -0.935  -0.399  0.00  0.00           C+0
HETATM    4  C   UNK     0      -2.485  -1.554   1.022  0.00  0.00           C+0
HETATM    5  C   UNK     0      -3.240  -2.883   1.069  0.00  0.00           C+0
HETATM    6  C   UNK     0      -2.647  -3.891   0.092  0.00  0.00           C+0
HETATM    7  N   UNK     0      -2.652  -3.380  -1.334  0.00  0.00           N+1
HETATM    8  O   UNK     0      -3.957  -3.295  -1.780  0.00  0.00           O-1
HETATM    9  C   UNK     0      -1.942  -4.372  -2.270  0.00  0.00           C+0
HETATM   10  C   UNK     0      -0.445  -4.601  -2.011  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.244  -3.339  -1.636  0.00  0.00           C+0
HETATM   12  C   UNK     0      -0.453  -2.196  -1.326  0.00  0.00           C+0
HETATM   13  N   UNK     0       0.424  -1.259  -0.864  0.00  0.00           N+0
HETATM   14  C   UNK     0       1.716  -1.734  -0.991  0.00  0.00           C+0
HETATM   15  C   UNK     0       2.953  -1.137  -0.700  0.00  0.00           C+0
HETATM   16  C   UNK     0       4.113  -1.890  -0.903  0.00  0.00           C+0
HETATM   17  C   UNK     0       4.045  -3.199  -1.371  0.00  0.00           C+0
HETATM   18  C   UNK     0       2.809  -3.791  -1.651  0.00  0.00           C+0
HETATM   19  C   UNK     0       1.625  -3.050  -1.467  0.00  0.00           C+0
HETATM   20  C   UNK     0       0.017   0.005  -0.258  0.00  0.00           C+0
HETATM   21  O   UNK     0       0.316  -0.072   1.139  0.00  0.00           O+0
HETATM   22  C   UNK     0       0.697   1.179   1.693  0.00  0.00           C+0
HETATM   23  C   UNK     0      -1.482   0.300  -0.465  0.00  0.00           C+0
HETATM   24  C   UNK     0      -1.937  -2.009  -1.415  0.00  0.00           C+0
HETATM   25  H   UNK     0      -3.882   1.641  -0.158  0.00  0.00           H+0
HETATM   26  H   UNK     0      -5.477   0.933  -0.380  0.00  0.00           H+0
HETATM   27  H   UNK     0      -4.527   0.494   1.039  0.00  0.00           H+0
HETATM   28  H   UNK     0      -4.603  -1.252  -0.769  0.00  0.00           H+0
HETATM   29  H   UNK     0      -3.847  -0.135  -1.882  0.00  0.00           H+0
HETATM   30  H   UNK     0      -1.470  -1.750   1.382  0.00  0.00           H+0
HETATM   31  H   UNK     0      -2.924  -0.857   1.743  0.00  0.00           H+0
HETATM   32  H   UNK     0      -4.304  -2.727   0.860  0.00  0.00           H+0
HETATM   33  H   UNK     0      -3.182  -3.293   2.084  0.00  0.00           H+0
HETATM   34  H   UNK     0      -3.231  -4.818   0.086  0.00  0.00           H+0
HETATM   35  H   UNK     0      -1.615  -4.126   0.367  0.00  0.00           H+0
HETATM   36  H   UNK     0      -2.501  -5.314  -2.207  0.00  0.00           H+0
HETATM   37  H   UNK     0      -2.090  -3.957  -3.276  0.00  0.00           H+0
HETATM   38  H   UNK     0       0.016  -5.042  -2.903  0.00  0.00           H+0
HETATM   39  H   UNK     0      -0.322  -5.325  -1.196  0.00  0.00           H+0
HETATM   40  H   UNK     0       3.017  -0.124  -0.317  0.00  0.00           H+0
HETATM   41  H   UNK     0       5.082  -1.448  -0.683  0.00  0.00           H+0
HETATM   42  H   UNK     0       4.959  -3.769  -1.517  0.00  0.00           H+0
HETATM   43  H   UNK     0       2.767  -4.815  -2.011  0.00  0.00           H+0
HETATM   44  H   UNK     0       0.620   0.786  -0.739  0.00  0.00           H+0
HETATM   45  H   UNK     0      -0.096   1.922   1.569  0.00  0.00           H+0
HETATM   46  H   UNK     0       1.621   1.536   1.230  0.00  0.00           H+0
HETATM   47  H   UNK     0       0.877   1.040   2.762  0.00  0.00           H+0
HETATM   48  H   UNK     0      -1.796   1.051   0.267  0.00  0.00           H+0
HETATM   49  H   UNK     0      -1.591   0.756  -1.459  0.00  0.00           H+0
HETATM   50  H   UNK     0      -2.156  -1.667  -2.438  0.00  0.00           H+0
CONECT    1    2   25   26   27                                             
CONECT    2    3    1   28   29                                             
CONECT    3   23   24    4    2                                             
CONECT    4    3    5   30   31                                             
CONECT    5    4    6   32   33                                             
CONECT    6    5    7   34   35                                             
CONECT    7    9   24    6    8                                             
CONECT    8    7                                                            
CONECT    9    7   10   36   37                                             
CONECT   10   11    9   38   39                                             
CONECT   11   10   12   19                                                  
CONECT   12   11   13   24                                                  
CONECT   13   20   12   14                                                  
CONECT   14   15   19   13                                                  
CONECT   15   16   14   40                                                  
CONECT   16   15   17   41                                                  
CONECT   17   18   16   42                                                  
CONECT   18   17   19   43                                                  
CONECT   19   18   14   11                                                  
CONECT   20   13   23   21   44                                             
CONECT   21   20   22                                                       
CONECT   22   21   45   46   47                                             
CONECT   23   20    3   48   49                                             
CONECT   24    3    7   50   12                                             
CONECT   25    1                                                            
CONECT   26    1                                                            
CONECT   27    1                                                            
CONECT   28    2                                                            
CONECT   29    2                                                            
CONECT   30    4                                                            
CONECT   31    4                                                            
CONECT   32    5                                                            
CONECT   33    5                                                            
CONECT   34    6                                                            
CONECT   35    6                                                            
CONECT   36    9                                                            
CONECT   37    9                                                            
CONECT   38   10                                                            
CONECT   39   10                                                            
CONECT   40   15                                                            
CONECT   41   16                                                            
CONECT   42   17                                                            
CONECT   43   18                                                            
CONECT   44   20                                                            
CONECT   45   22                                                            
CONECT   46   22                                                            
CONECT   47   22                                                            
CONECT   48   23                                                            
CONECT   49   23                                                            
CONECT   50   24                                                            
MASTER        0    0    0    0    0    0    0    0   50    0  108    0
END

RDKit          3D

50 54  0  0  0  0  0  0  0  0999 V2000
   -4.4614    0.7227   -0.0279 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8750   -0.4387   -0.8269 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4496   -0.9347   -0.3989 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.4850   -1.5541    1.0218 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2405   -2.8830    1.0693 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6471   -3.8906    0.0921 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6520   -3.3802   -1.3342 N   0  0  2  0  0  4  0  0  0  0  0  0
   -3.9572   -3.2954   -1.7800 O   0  0  0  0  0  1  0  0  0  0  0  0
   -1.9418   -4.3725   -2.2700 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4448   -4.6015   -2.0114 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2443   -3.3391   -1.6363 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4534   -2.1957   -1.3261 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4242   -1.2586   -0.8638 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.7160   -1.7338   -0.9913 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9526   -1.1366   -0.6997 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1126   -1.8899   -0.9029 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0446   -3.1985   -1.3715 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8089   -3.7910   -1.6513 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6248   -3.0499   -1.4668 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0171    0.0051   -0.2582 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.3155   -0.0720    1.1395 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6967    1.1790    1.6929 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4817    0.2995   -0.4650 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9373   -2.0088   -1.4150 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.8823    1.6408   -0.1581 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4773    0.9330   -0.3799 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5265    0.4942    1.0387 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6025   -1.2517   -0.7690 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8467   -0.1351   -1.8816 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4696   -1.7503    1.3819 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9235   -0.8569    1.7432 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3037   -2.7270    0.8600 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1823   -3.2929    2.0843 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2308   -4.8180    0.0859 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6153   -4.1260    0.3665 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5008   -5.3135   -2.2066 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0903   -3.9572   -3.2758 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0160   -5.0419   -2.9026 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3222   -5.3248   -1.1964 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0170   -0.1238   -0.3170 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0818   -1.4482   -0.6831 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9586   -3.7688   -1.5170 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7671   -4.8147   -2.0109 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6203    0.7860   -0.7393 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0958    1.9221    1.5686 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6215    1.5357    1.2296 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8774    1.0397    2.7622 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7957    1.0510    0.2671 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5914    0.7557   -1.4590 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1559   -1.6674   -2.4376 H   0  0  0  0  0  0  0  0  0  0  0  0
 13 20  1  0
 20 23  1  0
 23  3  1  0
 17 18  1  0
 20 21  1  0
 11 10  1  0
 16 15  1  0
 15 14  2  0
 24  3  1  0
 19 18  2  0
 11 12  2  0
 17 16  2  0
  7  9  1  0
  9 10  1  0
 12 13  1  0
 24  7  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  6
 19 14  1  0
 21 22  1  0
 14 13  1  0
 24 50  1  6
 11 19  1  0
  3  2  1  6
 12 24  1  0
  2  1  1  0
 17 42  1  0
 16 41  1  0
 15 40  1  0
 18 43  1  0
  9 36  1  0
  9 37  1  0
 20 44  1  6
 23 48  1  0
 23 49  1  0
 10 38  1  0
 10 39  1  0
  4 30  1  0
  4 31  1  0
  5 32  1  0
  5 33  1  0
  6 34  1  0
  6 35  1  0
 22 45  1  0
 22 46  1  0
 22 47  1  0
  2 28  1  0
  2 29  1  0
  1 25  1  0
  1 26  1  0
  1 27  1  0
M  CHG  2   7   1   8  -1
M  END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₀H₂₆N₂O₂

Average Mass

326.4400 Da

Monoisotopic Mass

326.19943 Da

IUPAC Name

(11S,15S,17R,19S)-15-ethyl-17-methoxy-1,11-diazapentacyclo[9.6.2.0^{2,7}.0^{8,18}.0^{15,19}]nonadeca-2,4,6,8(18)-tetraen-11-ium-11-olate

Traditional Name

(11S,15S,17R,19S)-15-ethyl-17-methoxy-1,11-diazapentacyclo[9.6.2.0^{2,7}.0^{8,18}.0^{15,19}]nonadeca-2,4,6,8(18)-tetraen-11-ium-11-olate

CAS Registry Number

Not Available

SMILES

[H]C1=C([H])C([H])=C2C(=C1[H])N1C3=C2C([H])([H])C([H])([H])[N@@+]2([O-])C([H])([H])C([H])([H])C([H])([H])[C@@](C([H])([H])C([H])([H])[H])(C([H])([H])[C@@]1([H])OC([H])([H])[H])[C@@]32[H]

InChI Identifier

InChI=1S/C20H26N2O2/c1-3-20-10-6-11-22(23)12-9-15-14-7-4-5-8-16(14)21(17(13-20)24-2)18(15)19(20)22/h4-5,7-8,17,19H,3,6,9-13H2,1-2H3/t17-,19-,20+,22+/m1/s1

InChI Key

KFAHAKAGWDLBIH-PBVWOCPUSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 150 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 250 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 175 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 225 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 125 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, Chloroform-d, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Not Available

Chemical Shift Submissions

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹H NMR Spectrum (1D, 400.0, Chloroform-d, simulated)	[email protected]	Not Available	Not Available	2026-02-13	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100.0, Chloroform-d, simulated)	[email protected]	Not Available	Not Available	2026-02-13	View Spectrum

Species

Species of Origin

Species Name	Source	Reference
Melodinus henryi		Not Available
Melodinus henryi	JEOL database	Feng, T., et al, J. Nat. Prod. 73, 22 (2010)

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.93	ALOGPS
logP	2.75	ChemAxon
logS	-4.5	ALOGPS
pKa (Strongest Basic)	3.2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	37.22 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	95.26 m³·mol⁻¹	ChemAxon
Polarizability	37.18 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

Not Available

References

General References

Feng T, Cai XH, Liu YP, Li Y, Wang YY, Luo XD: Melodinines A-G, monoterpenoid indole alkaloids from Melodinus henryi. J Nat Prod. 2010 Jan;73(1):22-6. doi: 10.1021/np900595v. [PubMed:20041704 ]
Feng, T., et al. (2010). Feng, T., et al, J. Nat. Prod. 73, 22 (2010). J. Nat. Prod..
DOI: 10.1021/np900595v
PMID: 20041704

Showing NP-Card for melodinine F (NP0035002)

MOL for NP0035002 (melodinine F)

3D MOL for NP0035002 (melodinine F)

3D SDF for NP0035002 (melodinine F)

3D-SDF for NP0035002 (melodinine F)

PDB for NP0035002 (melodinine F)

3D PDB for NP0035002 (melodinine F)

SMILES for NP0035002 (melodinine F)

INCHI for NP0035002 (melodinine F)

Structure for NP0035002 (melodinine F)

3D Structure for NP0035002 (melodinine F)