Np mrd loader

Record Information
Version2.0
Created at2021-06-20 18:00:28 UTC
Updated at2021-06-30 00:04:27 UTC
NP-MRD IDNP0034214
Secondary Accession NumbersNone
Natural Product Identification
Common Namenovaeguinoside A
Provided ByJEOL DatabaseJEOL Logo
DescriptionTrisodium (3S,6R)-6-[(2S,5S,7S,8S,10S,11S,14R,15R)-8-{[(2R,3R,4R,5S,6R)-3,4-dihydroxy-6-methyl-5-(sulfonatooxy)oxan-2-yl]oxy}-2,15-dimethyl-5-(sulfonatooxy)tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]Heptadec-1(17)-en-14-yl]-2-methylheptan-3-yl sulfate belongs to the class of organic compounds known as diterpene glycosides. These are diterpenoids in which an isoprene unit is glycosylated. novaeguinoside A is found in Culcita novaeguineae. novaeguinoside A was first documented in 2009 (Tang,, H. -F., et al.). Based on a literature review very few articles have been published on trisodium (3S,6R)-6-[(2S,5S,7S,8S,10S,11S,14R,15R)-8-{[(2R,3R,4R,5S,6R)-3,4-dihydroxy-6-methyl-5-(sulfonatooxy)oxan-2-yl]oxy}-2,15-dimethyl-5-(sulfonatooxy)tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]Heptadec-1(17)-en-14-yl]-2-methylheptan-3-yl sulfate.
Structure
Thumb
Synonyms
ValueSource
Trisodium (3S,6R)-6-[(2S,5S,7S,8S,10S,11S,14R,15R)-8-{[(2R,3R,4R,5S,6R)-3,4-dihydroxy-6-methyl-5-(sulfonatooxy)oxan-2-yl]oxy}-2,15-dimethyl-5-(sulfonatooxy)tetracyclo[8.7.0.0,.0,]heptadec-1(17)-en-14-yl]-2-methylheptan-3-yl sulfuric acidGenerator
Trisodium (3S,6R)-6-[(2S,5S,7S,8S,10S,11S,14R,15R)-8-{[(2R,3R,4R,5S,6R)-3,4-dihydroxy-6-methyl-5-(sulphonatooxy)oxan-2-yl]oxy}-2,15-dimethyl-5-(sulphonatooxy)tetracyclo[8.7.0.0,.0,]heptadec-1(17)-en-14-yl]-2-methylheptan-3-yl sulphateGenerator
Trisodium (3S,6R)-6-[(2S,5S,7S,8S,10S,11S,14R,15R)-8-{[(2R,3R,4R,5S,6R)-3,4-dihydroxy-6-methyl-5-(sulphonatooxy)oxan-2-yl]oxy}-2,15-dimethyl-5-(sulphonatooxy)tetracyclo[8.7.0.0,.0,]heptadec-1(17)-en-14-yl]-2-methylheptan-3-yl sulphuric acidGenerator
Chemical FormulaC33H53Na3O16S3
Average Mass870.9200 Da
Monoisotopic Mass870.21888 Da
IUPAC Nametrisodium (3S,6R)-6-[(2S,5S,7S,8S,10S,11S,14R,15R)-8-{[(2R,3R,4R,5S,6R)-3,4-dihydroxy-6-methyl-5-(sulfooxy)oxan-2-yl]oxy}-2,15-dimethyl-5-(sulfooxy)tetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-1(17)-en-14-yl]-2-methylheptan-3-yl sulfate
Traditional Nametrisodium (3S,6R)-6-[(2S,5S,7S,8S,10S,11S,14R,15R)-8-{[(2R,3R,4R,5S,6R)-3,4-dihydroxy-6-methyl-5-(sulfooxy)oxan-2-yl]oxy}-2,15-dimethyl-5-(sulfooxy)tetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-1(17)-en-14-yl]-2-methylheptan-3-yl sulfate
CAS Registry NumberNot Available
SMILES
[Na+].[Na+].[Na+].[H]O[C@@]1([H])[C@]([H])(O[C@@]2([H])C([H])([H])[C@]3([H])C(=C([H])C([H])([H])[C@]4(C([H])([H])[H])[C@]([H])(C([H])([H])C([H])([H])[C@@]34[H])[C@]([H])(C([H])([H])[H])C([H])([H])C([H])([H])[C@]([H])(O[S]([O-])(=O)=O)C([H])(C([H])([H])[H])C([H])([H])[H])[C@@]3(C([H])([H])[H])C([H])([H])C([H])([H])[C@]([H])(O[S]([O-])(=O)=O)C([H])([H])[C@]23[H])O[C@]([H])(C([H])([H])[H])[C@@]([H])(O[S]([O-])(=O)=O)[C@]1([H])O[H]
InChI Identifier
InChI=1S/C33H56O16S3.3Na/c1-17(2)26(48-51(39,40)41)10-7-18(3)22-8-9-23-21-16-27(46-31-29(35)28(34)30(19(4)45-31)49-52(42,43)44)25-15-20(47-50(36,37)38)11-13-33(25,6)24(21)12-14-32(22,23)5;;;/h12,17-23,25-31,34-35H,7-11,13-16H2,1-6H3,(H,36,37,38)(H,39,40,41)(H,42,43,44);;;/q;3*+1/p-3/t18-,19-,20+,21+,22-,23+,25-,26+,27+,28-,29-,30-,31+,32-,33-;;;/m1.../s1
InChI KeyKWQYTDNTVJVMSP-TVTIKWFQSA-K
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 600 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 500 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Culcita novaeguineaeJEOL database
    • Tang,, H. -F., et al, J. Nat. Prod. 72, 284 (2009)
Chemical Taxonomy
Description Belongs to the class of organic compounds known as diterpene glycosides. These are diterpenoids in which an isoprene unit is glycosylated.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTerpene glycosides
Direct ParentDiterpene glycosides
Alternative Parents
Substituents
  • Diterpene glycoside
  • Cholane-skeleton
  • Bile acid, alcohol, or derivatives
  • Sulfated steroid skeleton
  • Diterpenoid
  • Steroid
  • Glycosyl compound
  • O-glycosyl compound
  • Monosaccharide sulfate
  • Sulfuric acid ester
  • Alkyl sulfate
  • Sulfate-ester
  • Sulfuric acid monoester
  • Oxane
  • Monosaccharide
  • Organic sulfuric acid or derivatives
  • 1,2-diol
  • Secondary alcohol
  • Organoheterocyclic compound
  • Organic alkali metal salt
  • Oxacycle
  • Acetal
  • Organic sodium salt
  • Organic salt
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Organic oxygen compound
  • Alcohol
  • Organic cation
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.73ALOGPS
logP-0.48ChemAxon
logS-4.1ALOGPS
pKa (Strongest Acidic)-2.1ChemAxon
pKa (Strongest Basic)-3.7ChemAxon
Physiological Charge-3ChemAxon
Hydrogen Acceptor Count13ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area258.21 ŲChemAxon
Rotatable Bond Count13ChemAxon
Refractivity181.28 m³·mol⁻¹ChemAxon
Polarizability80.83 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID29213987
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound25243672
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Tang,, H. -F., et al. (2009). Tang,, H. -F., et al, J. Nat. Prod. 72, 284 (2009). J. Nat. Prod..