NP-MRD: Showing NP-Card for calyciphylline O (NP0034169)

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Record Information

Version

2.0

Created at

2021-06-20 17:58:27 UTC

Updated at

2021-06-30 00:04:23 UTC

NP-MRD ID

NP0034169

Secondary Accession Numbers

None

Natural Product Identification

Common Name

calyciphylline O

Provided By

JEOL Database JEOL Logo

Description

calyciphylline O is found in Daphniphyllum calycinum. calyciphylline O was first documented in 2009 (Yahata, H., et al.).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306202119583D          

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   -3.9217   -1.0635   -1.1899 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6293   -2.7904   -0.9106 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.7360   -2.3100    0.5421 H   0  0  0  0  0  0  0  0  0  0  0  0
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    4.2290   -3.7222    2.7980 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2177   -2.6076    3.7328 H   0  0  0  0  0  0  0  0  0  0  0  0
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  3  2  1  0  0  0  0
  3  4  2  0  0  0  0
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  2  1  1  0  0  0  0
 19  7  1  0  0  0  0
 20 11  1  0  0  0  0
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 11 12  1  0  0  0  0
 12 14  1  0  0  0  0
 15 14  1  6  0  0  0
 19 15  1  0  0  0  0
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 20  7  1  0  0  0  0
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  7  8  1  0  0  0  0
  7  6  1  1  0  0  0
 15 16  1  0  0  0  0
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 21 52  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0034169

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@@]1([H])C([H])([H])[C@]23C([H])([H])C([H])([H])C([H])([H])[C@@]2([H])[C@@]2(C([H])([H])C([H])([H])C(=O)OC([H])([H])[H])[C@]4([H])N([H])[C@]3([H])[C@]1([H])[C@]2(C([H])([H])[H])C([H])([H])C([H])([H])[C@]4([H])C([H])(C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C23H37NO3/c1-13(2)14-7-10-21(3)18-15(25)12-22-9-5-6-16(22)23(21,11-8-17(26)27-4)19(14)24-20(18)22/h13-16,18-20,24-25H,5-12H2,1-4H3/t14-,15+,16-,18-,19-,20-,21+,22-,23+/m1/s1

> <INCHI_KEY>
SCMNGYBPXCTRJK-BVWOZNPTSA-N

> <FORMULA>
C23H37NO3

> <MOLECULAR_WEIGHT>
375.553

> <EXACT_MASS>
375.277344055

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
64

> <JCHEM_AVERAGE_POLARIZABILITY>
43.73807619077327

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl 3-[(1S,2R,3R,7R,9S,10S,11R,14R)-9-hydroxy-1-methyl-14-(propan-2-yl)-12-azapentacyclo[8.6.0.0^{2,13}.0^{3,7}.0^{7,11}]hexadecan-2-yl]propanoate

> <ALOGPS_LOGP>
2.65

> <JCHEM_LOGP>
2.8719727889999995

> <ALOGPS_LOGS>
-4.48

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.861895914981929

> <JCHEM_PKA_STRONGEST_BASIC>
10.411579334704019

> <JCHEM_POLAR_SURFACE_AREA>
58.56

> <JCHEM_REFRACTIVITY>
104.12389999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.23e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
methyl 3-[(1S,2R,3R,7R,9S,10S,11R,14R)-9-hydroxy-14-isopropyl-1-methyl-12-azapentacyclo[8.6.0.0^{2,13}.0^{3,7}.0^{7,11}]hexadecan-2-yl]propanoate

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 64 68  0  0  0  0  0  0  0  0999 V2000
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    1.0228    0.3510   -1.6963 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2447    1.0800   -2.8064 C   0  0  1  0  0  0  0  0  0  0  0  0
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    3.2177   -2.6076    3.7328 H   0  0  0  0  0  0  0  0  0  0  0  0
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 21 52  1  0
M  END

HEADER    PROTEIN                                 20-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   20-JUN-21         0                                  
HETATM    1  C   UNK     0      -3.033   2.839   5.253  0.00  0.00           C+0
HETATM    2  O   UNK     0      -2.806   2.467   3.893  0.00  0.00           O+0
HETATM    3  C   UNK     0      -1.783   1.581   3.725  0.00  0.00           C+0
HETATM    4  O   UNK     0      -1.095   1.124   4.627  0.00  0.00           O+0
HETATM    5  C   UNK     0      -1.638   1.256   2.253  0.00  0.00           C+0
HETATM    6  C   UNK     0      -0.483   0.272   2.002  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.101  -0.070   0.521  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.899  -1.315   0.399  0.00  0.00           C+0
HETATM    9  N   UNK     0       0.588  -2.120  -0.775  0.00  0.00           N+0
HETATM   10  C   UNK     0       0.345  -1.111  -1.850  0.00  0.00           C+0
HETATM   11  C   UNK     0       1.023   0.351  -1.696  0.00  0.00           C+0
HETATM   12  C   UNK     0       0.245   1.080  -2.806  0.00  0.00           C+0
HETATM   13  O   UNK     0       0.834   0.735  -4.063  0.00  0.00           O+0
HETATM   14  C   UNK     0      -1.184   0.518  -2.751  0.00  0.00           C+0
HETATM   15  C   UNK     0      -1.127  -0.695  -1.793  0.00  0.00           C+0
HETATM   16  C   UNK     0      -2.135  -1.798  -2.156  0.00  0.00           C+0
HETATM   17  C   UNK     0      -3.143  -1.816  -1.017  0.00  0.00           C+0
HETATM   18  C   UNK     0      -2.318  -1.446   0.203  0.00  0.00           C+0
HETATM   19  C   UNK     0      -1.421  -0.306  -0.313  0.00  0.00           C+0
HETATM   20  C   UNK     0       0.814   0.972  -0.190  0.00  0.00           C+0
HETATM   21  C   UNK     0       0.275   2.413  -0.239  0.00  0.00           C+0
HETATM   22  C   UNK     0       2.187   1.070   0.659  0.00  0.00           C+0
HETATM   23  C   UNK     0       2.745  -0.162   1.494  0.00  0.00           C+0
HETATM   24  C   UNK     0       1.839  -1.454   1.597  0.00  0.00           C+0
HETATM   25  C   UNK     0       2.656  -2.772   1.629  0.00  0.00           C+0
HETATM   26  C   UNK     0       1.740  -3.988   1.814  0.00  0.00           C+0
HETATM   27  C   UNK     0       3.694  -2.767   2.759  0.00  0.00           C+0
HETATM   28  H   UNK     0      -3.868   3.545   5.275  0.00  0.00           H+0
HETATM   29  H   UNK     0      -3.303   1.963   5.850  0.00  0.00           H+0
HETATM   30  H   UNK     0      -2.150   3.335   5.667  0.00  0.00           H+0
HETATM   31  H   UNK     0      -1.483   2.198   1.727  0.00  0.00           H+0
HETATM   32  H   UNK     0      -2.590   0.829   1.929  0.00  0.00           H+0
HETATM   33  H   UNK     0       0.391   0.651   2.542  0.00  0.00           H+0
HETATM   34  H   UNK     0      -0.762  -0.665   2.505  0.00  0.00           H+0
HETATM   35  H   UNK     0       1.782  -1.003  -0.169  0.00  0.00           H+0
HETATM   36  H   UNK     0       1.391  -2.696  -1.033  0.00  0.00           H+0
HETATM   37  H   UNK     0       0.594  -1.557  -2.821  0.00  0.00           H+0
HETATM   38  H   UNK     0       2.092   0.293  -1.933  0.00  0.00           H+0
HETATM   39  H   UNK     0       0.274   2.169  -2.748  0.00  0.00           H+0
HETATM   40  H   UNK     0       0.327   1.189  -4.759  0.00  0.00           H+0
HETATM   41  H   UNK     0      -1.890   1.273  -2.390  0.00  0.00           H+0
HETATM   42  H   UNK     0      -1.513   0.218  -3.752  0.00  0.00           H+0
HETATM   43  H   UNK     0      -1.644  -2.776  -2.225  0.00  0.00           H+0
HETATM   44  H   UNK     0      -2.638  -1.627  -3.113  0.00  0.00           H+0
HETATM   45  H   UNK     0      -3.922  -1.063  -1.190  0.00  0.00           H+0
HETATM   46  H   UNK     0      -3.629  -2.790  -0.911  0.00  0.00           H+0
HETATM   47  H   UNK     0      -2.961  -1.141   1.031  0.00  0.00           H+0
HETATM   48  H   UNK     0      -1.736  -2.310   0.542  0.00  0.00           H+0
HETATM   49  H   UNK     0      -2.028   0.608  -0.305  0.00  0.00           H+0
HETATM   50  H   UNK     0       0.935   3.050  -0.839  0.00  0.00           H+0
HETATM   51  H   UNK     0       0.247   2.872   0.754  0.00  0.00           H+0
HETATM   52  H   UNK     0      -0.735   2.477  -0.651  0.00  0.00           H+0
HETATM   53  H   UNK     0       2.982   1.417  -0.014  0.00  0.00           H+0
HETATM   54  H   UNK     0       2.077   1.877   1.397  0.00  0.00           H+0
HETATM   55  H   UNK     0       3.002   0.177   2.505  0.00  0.00           H+0
HETATM   56  H   UNK     0       3.698  -0.439   1.022  0.00  0.00           H+0
HETATM   57  H   UNK     0       1.279  -1.423   2.537  0.00  0.00           H+0
HETATM   58  H   UNK     0       3.194  -2.887   0.679  0.00  0.00           H+0
HETATM   59  H   UNK     0       1.022  -4.089   0.997  0.00  0.00           H+0
HETATM   60  H   UNK     0       2.328  -4.913   1.843  0.00  0.00           H+0
HETATM   61  H   UNK     0       1.176  -3.919   2.750  0.00  0.00           H+0
HETATM   62  H   UNK     0       4.229  -3.722   2.798  0.00  0.00           H+0
HETATM   63  H   UNK     0       3.218  -2.608   3.733  0.00  0.00           H+0
HETATM   64  H   UNK     0       4.444  -1.984   2.615  0.00  0.00           H+0
CONECT    1    2   28   29   30                                             
CONECT    2    3    1                                                       
CONECT    3    5    2    4                                                  
CONECT    4    3                                                            
CONECT    5    3    6   31   32                                             
CONECT    6    7    5   33   34                                             
CONECT    7   19   20    8    6                                             
CONECT    8    9    7   24   35                                             
CONECT    9    8   10   36                                                  
CONECT   10    9   15   11   37                                             
CONECT   11   20   10   12   38                                             
CONECT   12   11   14   13   39                                             
CONECT   13   12   40                                                       
CONECT   14   12   15   41   42                                             
CONECT   15   10   14   19   16                                             
CONECT   16   15   17   43   44                                             
CONECT   17   16   18   45   46                                             
CONECT   18   17   19   47   48                                             
CONECT   19    7   15   18   49                                             
CONECT   20   11   22    7   21                                             
CONECT   21   20   50   51   52                                             
CONECT   22   23   20   53   54                                             
CONECT   23   24   22   55   56                                             
CONECT   24   23   25    8   57                                             
CONECT   25   24   26   27   58                                             
CONECT   26   25   59   60   61                                             
CONECT   27   25   62   63   64                                             
CONECT   28    1                                                            
CONECT   29    1                                                            
CONECT   30    1                                                            
CONECT   31    5                                                            
CONECT   32    5                                                            
CONECT   33    6                                                            
CONECT   34    6                                                            
CONECT   35    8                                                            
CONECT   36    9                                                            
CONECT   37   10                                                            
CONECT   38   11                                                            
CONECT   39   12                                                            
CONECT   40   13                                                            
CONECT   41   14                                                            
CONECT   42   14                                                            
CONECT   43   16                                                            
CONECT   44   16                                                            
CONECT   45   17                                                            
CONECT   46   17                                                            
CONECT   47   18                                                            
CONECT   48   18                                                            
CONECT   49   19                                                            
CONECT   50   21                                                            
CONECT   51   21                                                            
CONECT   52   21                                                            
CONECT   53   22                                                            
CONECT   54   22                                                            
CONECT   55   23                                                            
CONECT   56   23                                                            
CONECT   57   24                                                            
CONECT   58   25                                                            
CONECT   59   26                                                            
CONECT   60   26                                                            
CONECT   61   26                                                            
CONECT   62   27                                                            
CONECT   63   27                                                            
CONECT   64   27                                                            
MASTER        0    0    0    0    0    0    0    0   64    0  136    0
END

RDKit          3D

64 68  0  0  0  0  0  0  0  0999 V2000
   -3.0330    2.8392    5.2525 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8060    2.4667    3.8926 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7825    1.5805    3.7249 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0946    1.1242    4.6265 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6379    1.2558    2.2528 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4834    0.2718    2.0023 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1013   -0.0703    0.5206 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8992   -1.3154    0.3993 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.5883   -2.1199   -0.7748 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.3446   -1.1107   -1.8502 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.0228    0.3510   -1.6963 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2447    1.0800   -2.8064 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8341    0.7348   -4.0633 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1838    0.5181   -2.7505 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1267   -0.6946   -1.7925 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.1350   -1.7977   -2.1561 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1433   -1.8163   -1.0171 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3176   -1.4465    0.2025 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4211   -0.3059   -0.3125 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8142    0.9715   -0.1897 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2752    2.4132   -0.2390 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1869    1.0700    0.6594 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7449   -0.1623    1.4936 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8388   -1.4539    1.5975 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.6562   -2.7715    1.6292 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.7405   -3.9882    1.8136 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6936   -2.7672    2.7592 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8683    3.5446    5.2754 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3033    1.9630    5.8501 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1496    3.3350    5.6667 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4833    2.1979    1.7274 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5903    0.8289    1.9287 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3906    0.6514    2.5415 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7622   -0.6647    2.5050 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7818   -1.0032   -0.1687 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3911   -2.6959   -1.0331 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5936   -1.5571   -2.8211 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0923    0.2930   -1.9332 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2737    2.1688   -2.7477 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3269    1.1890   -4.7587 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8901    1.2732   -2.3901 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5134    0.2184   -3.7522 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6439   -2.7756   -2.2250 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6381   -1.6270   -3.1132 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9217   -1.0635   -1.1899 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6293   -2.7904   -0.9106 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9609   -1.1405    1.0312 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7360   -2.3100    0.5421 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0278    0.6080   -0.3054 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9348    3.0503   -0.8393 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2471    2.8721    0.7538 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7345    2.4769   -0.6511 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9817    1.4170   -0.0142 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0770    1.8771    1.3970 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0023    0.1765    2.5049 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6984   -0.4385    1.0225 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2787   -1.4231    2.5370 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1937   -2.8870    0.6794 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0221   -4.0888    0.9966 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3277   -4.9126    1.8430 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1763   -3.9192    2.7501 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2290   -3.7222    2.7980 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2177   -2.6076    3.7328 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4437   -1.9840    2.6154 H   0  0  0  0  0  0  0  0  0  0  0  0
 24 23  1  0
  5  3  1  0
  8  9  1  0
  3  2  1  0
  3  4  2  0
  9 10  1  0
  2  1  1  0
 19  7  1  0
 20 11  1  0
 15 10  1  0
 23 22  1  0
 24 25  1  0
 22 20  1  0
 10 11  1  0
 11 12  1  0
 12 14  1  0
 15 14  1  6
 19 15  1  0
 25 26  1  0
 20  7  1  0
 25 27  1  0
  7  8  1  0
  7  6  1  1
 15 16  1  0
 16 17  1  0
 17 18  1  0
 19 18  1  0
  8 24  1  0
 12 13  1  0
  6  5  1  0
 20 21  1  6
 23 55  1  0
 23 56  1  0
 22 53  1  0
 22 54  1  0
  8 35  1  6
 24 57  1  1
  9 36  1  0
 25 58  1  6
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 26 60  1  0
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 27 63  1  0
 27 64  1  0
  6 33  1  0
  6 34  1  0
  5 31  1  0
  5 32  1  0
  1 28  1  0
  1 29  1  0
  1 30  1  0
 11 38  1  6
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 19 49  1  6
 16 43  1  0
 16 44  1  0
 17 45  1  0
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 18 47  1  0
 18 48  1  0
 13 40  1  0
 21 50  1  0
 21 51  1  0
 21 52  1  0
M  END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₃H₃₇NO₃

Average Mass

375.5530 Da

Monoisotopic Mass

375.27734 Da

IUPAC Name

methyl 3-[(1S,2R,3R,7R,9S,10S,11R,14R)-9-hydroxy-1-methyl-14-(propan-2-yl)-12-azapentacyclo[8.6.0.0^{2,13}.0^{3,7}.0^{7,11}]hexadecan-2-yl]propanoate

Traditional Name

methyl 3-[(1S,2R,3R,7R,9S,10S,11R,14R)-9-hydroxy-14-isopropyl-1-methyl-12-azapentacyclo[8.6.0.0^{2,13}.0^{3,7}.0^{7,11}]hexadecan-2-yl]propanoate

CAS Registry Number

Not Available

SMILES

[H]O[C@@]1([H])C([H])([H])[C@]23C([H])([H])C([H])([H])C([H])([H])[C@@]2([H])[C@@]2(C([H])([H])C([H])([H])C(=O)OC([H])([H])[H])[C@]4([H])N([H])[C@]3([H])[C@]1([H])[C@]2(C([H])([H])[H])C([H])([H])C([H])([H])[C@]4([H])C([H])(C([H])([H])[H])C([H])([H])[H]

InChI Identifier

InChI=1S/C23H37NO3/c1-13(2)14-7-10-21(3)18-15(25)12-22-9-5-6-16(22)23(21,11-8-17(26)27-4)19(14)24-20(18)22/h13-16,18-20,24-25H,5-12H2,1-4H3/t14-,15+,16-,18-,19-,20-,21+,22-,23+/m1/s1

InChI Key

SCMNGYBPXCTRJK-BVWOZNPTSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Daphniphyllum calycinum	JEOL database	Yahata, H., et al, J. Nat. Prod. 72, 148 (2009)

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.65	ALOGPS
logP	2.87	ChemAxon
logS	-4.5	ALOGPS
pKa (Strongest Acidic)	14.86	ChemAxon
pKa (Strongest Basic)	10.41	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	58.56 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	104.12 m³·mol⁻¹	ChemAxon
Polarizability	43.74 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

Not Available

References

General References

Yahata, H., et al. (2009). Yahata, H., et al, J. Nat. Prod. 72, 148 (2009). J. Nat. Prod..

Showing NP-Card for calyciphylline O (NP0034169)

MOL for NP0034169 (calyciphylline O)

3D MOL for NP0034169 (calyciphylline O)

3D SDF for NP0034169 (calyciphylline O)

3D-SDF for NP0034169 (calyciphylline O)

PDB for NP0034169 (calyciphylline O)

3D PDB for NP0034169 (calyciphylline O)

SMILES for NP0034169 (calyciphylline O)

INCHI for NP0034169 (calyciphylline O)

Structure for NP0034169 (calyciphylline O)

3D Structure for NP0034169 (calyciphylline O)