Np mrd loader

Record Information
Version2.0
Created at2021-06-20 17:42:43 UTC
Updated at2021-06-30 00:03:47 UTC
NP-MRD IDNP0033795
Secondary Accession NumbersNone
Natural Product Identification
Common Name1-O-3',4',5'-trimethoxyphenyl-(3-O-galloyl-6-O-sulfate)-beta-D-glucopyran+
Provided ByJEOL DatabaseJEOL Logo
DescriptionSodium 5-({[(2R,3R,4S,5R,6S)-3,5-dihydroxy-2-[(sulfooxy)methyl]-6-(3,4,5-trimethoxyphenoxy)oxan-4-yl]oxy}carbonyl)-2,3-dihydroxybenzen-1-olate belongs to the class of organic compounds known as phenolic glycosides. These are organic compounds containing a phenolic structure attached to a glycosyl moiety. Some examples of phenolic structures include lignans, and flavonoids. Among the sugar units found in natural glycosides are D-glucose, L-Fructose, and L rhamnose. 1-O-3',4',5'-trimethoxyphenyl-(3-O-galloyl-6-O-sulfate)-beta-D-glucopyran+ is found in C. glabrum and Caryocar villosum. 1-O-3',4',5'-trimethoxyphenyl-(3-O-galloyl-6-O-sulfate)-beta-D-glucopyran+ was first documented in 2008 (Magid, A. A., et al.). Based on a literature review very few articles have been published on sodium 5-({[(2R,3R,4S,5R,6S)-3,5-dihydroxy-2-[(sulfooxy)methyl]-6-(3,4,5-trimethoxyphenoxy)oxan-4-yl]oxy}carbonyl)-2,3-dihydroxybenzen-1-olate.
Structure
Thumb
Synonyms
ValueSource
Sodium 5-({[(2R,3R,4S,5R,6S)-3,5-dihydroxy-2-[(sulfooxy)methyl]-6-(3,4,5-trimethoxyphenoxy)oxan-4-yl]oxy}carbonyl)-2,3-dihydroxybenzen-1-olic acidGenerator
Sodium 5-({[(2R,3R,4S,5R,6S)-3,5-dihydroxy-2-[(sulphooxy)methyl]-6-(3,4,5-trimethoxyphenoxy)oxan-4-yl]oxy}carbonyl)-2,3-dihydroxybenzen-1-olateGenerator
Sodium 5-({[(2R,3R,4S,5R,6S)-3,5-dihydroxy-2-[(sulphooxy)methyl]-6-(3,4,5-trimethoxyphenoxy)oxan-4-yl]oxy}carbonyl)-2,3-dihydroxybenzen-1-olic acidGenerator
Chemical FormulaC22H25NaO16S
Average Mass600.4800 Da
Monoisotopic Mass600.07610 Da
IUPAC Namesodium [(2R,3R,4S,5R,6S)-3,5-dihydroxy-4-(3,4,5-trihydroxybenzoyloxy)-6-(3,4,5-trimethoxyphenoxy)oxan-2-yl]methyl sulfate
Traditional Namesodium [(2R,3R,4S,5R,6S)-3,5-dihydroxy-4-(3,4,5-trihydroxybenzoyloxy)-6-(3,4,5-trimethoxyphenoxy)oxan-2-yl]methyl sulfate
CAS Registry NumberNot Available
SMILES
[Na+].[H]OC1=C([H])C(=C([H])C(O[H])=C1O[H])C(=O)O[C@]1([H])[C@@]([H])(O[H])[C@]([H])(OC2=C([H])C(OC([H])([H])[H])=C(OC([H])([H])[H])C(OC([H])([H])[H])=C2[H])O[C@]([H])(C([H])([H])O[S]([O-])(=O)=O)[C@@]1([H])O[H]
InChI Identifier
InChI=1S/C22H26O16S.Na/c1-32-13-6-10(7-14(33-2)19(13)34-3)36-22-18(27)20(17(26)15(37-22)8-35-39(29,30)31)38-21(28)9-4-11(23)16(25)12(24)5-9;/h4-7,15,17-18,20,22-27H,8H2,1-3H3,(H,29,30,31);/q;+1/p-1/t15-,17-,18-,20+,22-;/m1./s1
InChI KeyMFUJWRIADQLWSW-UJNUMTRNSA-M
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 500 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 600 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Caryocar glabrumJEOL database
    • Magid, A. A., et al, J. Nat. Prod. 71, 914 (2008)
Caryocar villosumJEOL database
    • Magid, A. A., et al, J. Nat. Prod. 71, 914 (2008)
Chemical Taxonomy
Description Belongs to the class of organic compounds known as phenolic glycosides. These are organic compounds containing a phenolic structure attached to a glycosyl moiety. Some examples of phenolic structures include lignans, and flavonoids. Among the sugar units found in natural glycosides are D-glucose, L-Fructose, and L rhamnose.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassCarbohydrates and carbohydrate conjugates
Direct ParentPhenolic glycosides
Alternative Parents
Substituents
  • Phenolic glycoside
  • Galloyl ester
  • Gallic acid or derivatives
  • O-glycosyl compound
  • P-hydroxybenzoic acid alkyl ester
  • M-hydroxybenzoic acid ester
  • P-hydroxybenzoic acid ester
  • Monosaccharide sulfate
  • Benzoate ester
  • Pyrogallol derivative
  • Benzoic acid or derivatives
  • Benzenetriol
  • Phenol ether
  • Phenoxy compound
  • Anisole
  • Benzoyl
  • Methoxybenzene
  • Alkyl aryl ether
  • 1-hydroxy-2-unsubstituted benzenoid
  • 1-hydroxy-4-unsubstituted benzenoid
  • Phenol
  • Sulfuric acid ester
  • Alkyl sulfate
  • Sulfate-ester
  • Sulfuric acid monoester
  • Monosaccharide
  • Benzenoid
  • Monocyclic benzene moiety
  • Oxane
  • Organic sulfuric acid or derivatives
  • Carboxylic acid ester
  • Secondary alcohol
  • Monocarboxylic acid or derivatives
  • Ether
  • Acetal
  • Carboxylic acid derivative
  • Organoheterocyclic compound
  • Organic alkali metal salt
  • Oxacycle
  • Polyol
  • Organic salt
  • Organic sodium salt
  • Hydrocarbon derivative
  • Organic oxide
  • Alcohol
  • Organic cation
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.82ALOGPS
logP-1.5ChemAxon
logS-2.1ALOGPS
pKa (Strongest Acidic)-2.3ChemAxon
pKa (Strongest Basic)-3.7ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count14ChemAxon
Hydrogen Donor Count5ChemAxon
Polar Surface Area240.03 ŲChemAxon
Rotatable Bond Count11ChemAxon
Refractivity124.21 m³·mol⁻¹ChemAxon
Polarizability51.62 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound24879019
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Magid, A. A., et al. (2008). Magid, A. A., et al, J. Nat. Prod. 71, 914 (2008) . J. Nat. Prod..