NP-MRD: Showing NP-Card for gibberosene B (NP0033507)

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Record Information

Version

2.0

Created at

2021-06-20 17:30:46 UTC

Updated at

2021-06-30 00:03:19 UTC

NP-MRD ID

NP0033507

Secondary Accession Numbers

None

Natural Product Identification

Common Name

gibberosene B

Provided By

JEOL Database JEOL Logo

Description

gibberosene B is found in Simularia gibberosa and Sinularia gibberosa. gibberosene B was first documented in 2008 (Ahmed, A. F., et al.).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306202119303D          

 59 60  0  0  0  0            999 V2000
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M  END

     RDKit          3D

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M  END


  Mrv1652306202119303D          

 59 60  0  0  0  0            999 V2000
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   -1.2604   -2.4080   -1.5383 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7823   -2.8270    1.0777 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7323   -1.5365    2.9558 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7150   -2.5567    2.7996 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8373   -3.2806    3.2155 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4120   -4.8737    1.2835 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0138   -4.0135    0.6803 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3802   -4.2803   -0.3791 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3494   -0.9716    1.3517 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1242    0.1917   -1.4585 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5406    1.3126    1.6385 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3238    2.6029    1.7005 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8881    0.9748    2.1805 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7625    2.4617   -0.6209 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8923    1.7282   -1.9383 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4507    3.8338   -0.2389 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7120    4.3453   -1.3378 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5880    3.3348   -3.2946 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3227    3.4740   -4.5588 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7929    2.9841   -3.7121 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4205    4.7077   -3.9284 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6879    4.8681   -0.6300 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1028    4.4314   -1.5512 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0731    3.2182    0.5344 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4716    2.5776    0.2468 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4853    1.4246   -1.8758 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3616   -0.2367    1.7028 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1691    1.5113    1.6641 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7419    0.4773    1.8079 H   0  0  0  0  0  0  0  0  0  0  0  0
  5  6  1  0  0  0  0
 18 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 24  1  0  0  0  0
  5 24  1  0  0  0  0
  7  8  1  0  0  0  0
  7 11  2  0  0  0  0
  8  9  1  0  0  0  0
 11 12  1  0  0  0  0
  8 10  1  0  0  0  0
 15 16  1  0  0  0  0
 13 14  1  0  0  0  0
 16 17  1  0  0  0  0
 24 25  1  1  0  0  0
 17 18  2  0  0  0  0
 22 23  1  0  0  0  0
 24 23  1  0  0  0  0
 19 18  1  0  0  0  0
  5  4  1  0  0  0  0
 12 13  2  0  0  0  0
  4  2  1  0  0  0  0
  6  7  1  0  0  0  0
  2  1  1  0  0  0  0
 13 15  1  0  0  0  0
  2  3  2  0  0  0  0
 12 40  1  0  0  0  0
  6 30  1  0  0  0  0
  6 31  1  0  0  0  0
 11 39  1  0  0  0  0
 15 44  1  0  0  0  0
 15 45  1  0  0  0  0
 16 46  1  0  0  0  0
 16 47  1  0  0  0  0
 17 48  1  0  0  0  0
 19 49  1  0  0  0  0
 19 50  1  0  0  0  0
 19 51  1  0  0  0  0
 20 52  1  0  0  0  0
 20 53  1  0  0  0  0
 21 54  1  0  0  0  0
 21 55  1  0  0  0  0
 22 56  1  6  0  0  0
  8 32  1  1  0  0  0
  9 33  1  0  0  0  0
  9 34  1  0  0  0  0
  9 35  1  0  0  0  0
 10 36  1  0  0  0  0
 10 37  1  0  0  0  0
 10 38  1  0  0  0  0
 14 41  1  0  0  0  0
 14 42  1  0  0  0  0
 14 43  1  0  0  0  0
 25 57  1  0  0  0  0
 25 58  1  0  0  0  0
 25 59  1  0  0  0  0
  5 29  1  1  0  0  0
  1 26  1  0  0  0  0
  1 27  1  0  0  0  0
  1 28  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0033507

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]/C1=C(C([H])([H])[H])\C([H])([H])C([H])([H])\C([H])=C(C([H])([H])[H])/C([H])([H])C([H])([H])[C@]2([H])O[C@@]2(C([H])([H])[H])[C@@]([H])(OC(=O)C([H])([H])[H])C([H])([H])/C(=C\1/[H])C([H])(C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C22H34O3/c1-15(2)19-12-10-16(3)8-7-9-17(4)11-13-20-22(6,25-20)21(14-19)24-18(5)23/h9-10,12,15,20-21H,7-8,11,13-14H2,1-6H3/b16-10+,17-9-,19-12+/t20-,21-,22+/m0/s1

> <INCHI_KEY>
DGDSKYGEKMVUCF-HESWHYPDSA-N

> <FORMULA>
C22H34O3

> <MOLECULAR_WEIGHT>
346.511

> <EXACT_MASS>
346.250794955

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
59

> <JCHEM_AVERAGE_POLARIZABILITY>
40.6404016113743

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,2S,4E,6E,10Z,14S)-1,7,11-trimethyl-4-(propan-2-yl)-15-oxabicyclo[12.1.0]pentadeca-4,6,10-trien-2-yl acetate

> <ALOGPS_LOGP>
6.29

> <JCHEM_LOGP>
4.9467478263333335

> <ALOGPS_LOGS>
-4.91

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-4.242984899691172

> <JCHEM_POLAR_SURFACE_AREA>
38.83

> <JCHEM_REFRACTIVITY>
104.4315

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.24e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2S,4E,6E,10Z,14S)-4-isopropyl-1,7,11-trimethyl-15-oxabicyclo[12.1.0]pentadeca-4,6,10-trien-2-yl acetate

> <JCHEM_VEBER_RULE>
1

$$$$

     RDKit          3D

 59 60  0  0  0  0  0  0  0  0999 V2000
   -5.1621   -0.8645   -3.4340 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5984   -1.0528   -2.0590 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2616   -1.3658   -1.0804 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2546   -0.8436   -2.0806 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5936   -0.8801   -0.7929 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.1690   -1.4276   -1.0512 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2826   -1.5791    0.1802 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6919   -2.7221    1.1214 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3614   -2.5050    2.6046 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0811   -4.0452    0.6477 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7834   -0.7904    0.4411 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3335    0.2598   -0.3933 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1234    1.2691    0.0277 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4851    1.5457    1.4649 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7477    2.2290   -0.9716 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9786    3.5492   -1.1538 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0686    3.5245   -2.3544 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2606    3.7411   -2.4004 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9861    3.7235   -3.7240 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1363    4.0452   -1.2010 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3985    2.8667   -0.2554 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9697    1.6637   -0.9392 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.3850    1.5079   -0.8387 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5872    0.5080   -0.1630 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7212    0.5694    1.3306 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2484   -0.9874   -3.4005 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7447   -1.6137   -4.1113 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9394    0.1444   -3.7908 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1199   -1.5845   -0.1391 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6911   -0.8121   -1.8200 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2604   -2.4080   -1.5383 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7823   -2.8270    1.0777 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7323   -1.5365    2.9558 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7150   -2.5567    2.7996 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8373   -3.2806    3.2155 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4120   -4.8737    1.2835 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0138   -4.0135    0.6803 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3802   -4.2803   -0.3791 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3494   -0.9716    1.3517 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1242    0.1917   -1.4585 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5406    1.3126    1.6385 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3238    2.6029    1.7005 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8881    0.9748    2.1805 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7625    2.4617   -0.6209 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8923    1.7282   -1.9383 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4507    3.8338   -0.2389 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7120    4.3453   -1.3378 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5880    3.3348   -3.2946 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3227    3.4740   -4.5588 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7929    2.9841   -3.7121 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4205    4.7077   -3.9284 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6879    4.8681   -0.6300 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1028    4.4314   -1.5512 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0731    3.2182    0.5344 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4716    2.5776    0.2468 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4853    1.4246   -1.8758 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3616   -0.2367    1.7028 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1691    1.5113    1.6641 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7419    0.4773    1.8079 H   0  0  0  0  0  0  0  0  0  0  0  0
  5  6  1  0
 18 20  1  0
 20 21  1  0
 21 22  1  0
 22 24  1  0
  5 24  1  0
  7  8  1  0
  7 11  2  0
  8  9  1  0
 11 12  1  0
  8 10  1  0
 15 16  1  0
 13 14  1  0
 16 17  1  0
 24 25  1  1
 17 18  2  0
 22 23  1  0
 24 23  1  0
 19 18  1  0
  5  4  1  0
 12 13  2  0
  4  2  1  0
  6  7  1  0
  2  1  1  0
 13 15  1  0
  2  3  2  0
 12 40  1  0
  6 30  1  0
  6 31  1  0
 11 39  1  0
 15 44  1  0
 15 45  1  0
 16 46  1  0
 16 47  1  0
 17 48  1  0
 19 49  1  0
 19 50  1  0
 19 51  1  0
 20 52  1  0
 20 53  1  0
 21 54  1  0
 21 55  1  0
 22 56  1  6
  8 32  1  1
  9 33  1  0
  9 34  1  0
  9 35  1  0
 10 36  1  0
 10 37  1  0
 10 38  1  0
 14 41  1  0
 14 42  1  0
 14 43  1  0
 25 57  1  0
 25 58  1  0
 25 59  1  0
  5 29  1  1
  1 26  1  0
  1 27  1  0
  1 28  1  0
M  END

HEADER    PROTEIN                                 20-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   20-JUN-21         0                                  
HETATM    1  C   UNK     0      -5.162  -0.865  -3.434  0.00  0.00           C+0
HETATM    2  C   UNK     0      -4.598  -1.053  -2.059  0.00  0.00           C+0
HETATM    3  O   UNK     0      -5.262  -1.366  -1.080  0.00  0.00           O+0
HETATM    4  O   UNK     0      -3.255  -0.844  -2.081  0.00  0.00           O+0
HETATM    5  C   UNK     0      -2.594  -0.880  -0.793  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.169  -1.428  -1.051  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.283  -1.579   0.180  0.00  0.00           C+0
HETATM    8  C   UNK     0      -0.692  -2.722   1.121  0.00  0.00           C+0
HETATM    9  C   UNK     0      -0.361  -2.505   2.605  0.00  0.00           C+0
HETATM   10  C   UNK     0      -0.081  -4.045   0.648  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.783  -0.790   0.441  0.00  0.00           C+0
HETATM   12  C   UNK     0       1.333   0.260  -0.393  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.123   1.269   0.028  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.485   1.546   1.465  0.00  0.00           C+0
HETATM   15  C   UNK     0       2.748   2.229  -0.972  0.00  0.00           C+0
HETATM   16  C   UNK     0       1.979   3.549  -1.154  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.069   3.525  -2.354  0.00  0.00           C+0
HETATM   18  C   UNK     0      -0.261   3.741  -2.400  0.00  0.00           C+0
HETATM   19  C   UNK     0      -0.986   3.724  -3.724  0.00  0.00           C+0
HETATM   20  C   UNK     0      -1.136   4.045  -1.201  0.00  0.00           C+0
HETATM   21  C   UNK     0      -1.399   2.867  -0.255  0.00  0.00           C+0
HETATM   22  C   UNK     0      -1.970   1.664  -0.939  0.00  0.00           C+0
HETATM   23  O   UNK     0      -3.385   1.508  -0.839  0.00  0.00           O+0
HETATM   24  C   UNK     0      -2.587   0.508  -0.163  0.00  0.00           C+0
HETATM   25  C   UNK     0      -2.721   0.569   1.331  0.00  0.00           C+0
HETATM   26  H   UNK     0      -6.248  -0.987  -3.401  0.00  0.00           H+0
HETATM   27  H   UNK     0      -4.745  -1.614  -4.111  0.00  0.00           H+0
HETATM   28  H   UNK     0      -4.939   0.144  -3.791  0.00  0.00           H+0
HETATM   29  H   UNK     0      -3.120  -1.585  -0.139  0.00  0.00           H+0
HETATM   30  H   UNK     0      -0.691  -0.812  -1.820  0.00  0.00           H+0
HETATM   31  H   UNK     0      -1.260  -2.408  -1.538  0.00  0.00           H+0
HETATM   32  H   UNK     0      -1.782  -2.827   1.078  0.00  0.00           H+0
HETATM   33  H   UNK     0      -0.732  -1.537   2.956  0.00  0.00           H+0
HETATM   34  H   UNK     0       0.715  -2.557   2.800  0.00  0.00           H+0
HETATM   35  H   UNK     0      -0.837  -3.281   3.216  0.00  0.00           H+0
HETATM   36  H   UNK     0      -0.412  -4.874   1.284  0.00  0.00           H+0
HETATM   37  H   UNK     0       1.014  -4.013   0.680  0.00  0.00           H+0
HETATM   38  H   UNK     0      -0.380  -4.280  -0.379  0.00  0.00           H+0
HETATM   39  H   UNK     0       1.349  -0.972   1.352  0.00  0.00           H+0
HETATM   40  H   UNK     0       1.124   0.192  -1.458  0.00  0.00           H+0
HETATM   41  H   UNK     0       3.541   1.313   1.639  0.00  0.00           H+0
HETATM   42  H   UNK     0       2.324   2.603   1.700  0.00  0.00           H+0
HETATM   43  H   UNK     0       1.888   0.975   2.180  0.00  0.00           H+0
HETATM   44  H   UNK     0       3.763   2.462  -0.621  0.00  0.00           H+0
HETATM   45  H   UNK     0       2.892   1.728  -1.938  0.00  0.00           H+0
HETATM   46  H   UNK     0       1.451   3.834  -0.239  0.00  0.00           H+0
HETATM   47  H   UNK     0       2.712   4.345  -1.338  0.00  0.00           H+0
HETATM   48  H   UNK     0       1.588   3.335  -3.295  0.00  0.00           H+0
HETATM   49  H   UNK     0      -0.323   3.474  -4.559  0.00  0.00           H+0
HETATM   50  H   UNK     0      -1.793   2.984  -3.712  0.00  0.00           H+0
HETATM   51  H   UNK     0      -1.421   4.708  -3.928  0.00  0.00           H+0
HETATM   52  H   UNK     0      -0.688   4.868  -0.630  0.00  0.00           H+0
HETATM   53  H   UNK     0      -2.103   4.431  -1.551  0.00  0.00           H+0
HETATM   54  H   UNK     0      -2.073   3.218   0.534  0.00  0.00           H+0
HETATM   55  H   UNK     0      -0.472   2.578   0.247  0.00  0.00           H+0
HETATM   56  H   UNK     0      -1.485   1.425  -1.876  0.00  0.00           H+0
HETATM   57  H   UNK     0      -3.362  -0.237   1.703  0.00  0.00           H+0
HETATM   58  H   UNK     0      -3.169   1.511   1.664  0.00  0.00           H+0
HETATM   59  H   UNK     0      -1.742   0.477   1.808  0.00  0.00           H+0
CONECT    1    2   26   27   28                                             
CONECT    2    4    1    3                                                  
CONECT    3    2                                                            
CONECT    4    5    2                                                       
CONECT    5    6   24    4   29                                             
CONECT    6    5    7   30   31                                             
CONECT    7    8   11    6                                                  
CONECT    8    7    9   10   32                                             
CONECT    9    8   33   34   35                                             
CONECT   10    8   36   37   38                                             
CONECT   11    7   12   39                                                  
CONECT   12   11   13   40                                                  
CONECT   13   14   12   15                                                  
CONECT   14   13   41   42   43                                             
CONECT   15   16   13   44   45                                             
CONECT   16   15   17   46   47                                             
CONECT   17   16   18   48                                                  
CONECT   18   20   17   19                                                  
CONECT   19   18   49   50   51                                             
CONECT   20   18   21   52   53                                             
CONECT   21   20   22   54   55                                             
CONECT   22   21   24   23   56                                             
CONECT   23   22   24                                                       
CONECT   24   22    5   25   23                                             
CONECT   25   24   57   58   59                                             
CONECT   26    1                                                            
CONECT   27    1                                                            
CONECT   28    1                                                            
CONECT   29    5                                                            
CONECT   30    6                                                            
CONECT   31    6                                                            
CONECT   32    8                                                            
CONECT   33    9                                                            
CONECT   34    9                                                            
CONECT   35    9                                                            
CONECT   36   10                                                            
CONECT   37   10                                                            
CONECT   38   10                                                            
CONECT   39   11                                                            
CONECT   40   12                                                            
CONECT   41   14                                                            
CONECT   42   14                                                            
CONECT   43   14                                                            
CONECT   44   15                                                            
CONECT   45   15                                                            
CONECT   46   16                                                            
CONECT   47   16                                                            
CONECT   48   17                                                            
CONECT   49   19                                                            
CONECT   50   19                                                            
CONECT   51   19                                                            
CONECT   52   20                                                            
CONECT   53   20                                                            
CONECT   54   21                                                            
CONECT   55   21                                                            
CONECT   56   22                                                            
CONECT   57   25                                                            
CONECT   58   25                                                            
CONECT   59   25                                                            
MASTER        0    0    0    0    0    0    0    0   59    0  120    0
END

RDKit          3D

59 60  0  0  0  0  0  0  0  0999 V2000
   -5.1621   -0.8645   -3.4340 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5984   -1.0528   -2.0590 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2616   -1.3658   -1.0804 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2546   -0.8436   -2.0806 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5936   -0.8801   -0.7929 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.1690   -1.4276   -1.0512 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2826   -1.5791    0.1802 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6919   -2.7221    1.1214 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3614   -2.5050    2.6046 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0811   -4.0452    0.6477 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7834   -0.7904    0.4411 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3335    0.2598   -0.3933 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1234    1.2691    0.0277 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4851    1.5457    1.4649 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7477    2.2290   -0.9716 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9786    3.5492   -1.1538 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0686    3.5245   -2.3544 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2606    3.7411   -2.4004 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9861    3.7235   -3.7240 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1363    4.0452   -1.2010 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3985    2.8667   -0.2554 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9697    1.6637   -0.9392 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.3850    1.5079   -0.8387 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5872    0.5080   -0.1630 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7212    0.5694    1.3306 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2484   -0.9874   -3.4005 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7447   -1.6137   -4.1113 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9394    0.1444   -3.7908 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1199   -1.5845   -0.1391 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6911   -0.8121   -1.8200 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2604   -2.4080   -1.5383 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7823   -2.8270    1.0777 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7323   -1.5365    2.9558 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7150   -2.5567    2.7996 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8373   -3.2806    3.2155 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4120   -4.8737    1.2835 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0138   -4.0135    0.6803 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3802   -4.2803   -0.3791 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3494   -0.9716    1.3517 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1242    0.1917   -1.4585 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5406    1.3126    1.6385 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3238    2.6029    1.7005 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8881    0.9748    2.1805 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7625    2.4617   -0.6209 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8923    1.7282   -1.9383 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4507    3.8338   -0.2389 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7120    4.3453   -1.3378 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5880    3.3348   -3.2946 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3227    3.4740   -4.5588 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7929    2.9841   -3.7121 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4205    4.7077   -3.9284 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6879    4.8681   -0.6300 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1028    4.4314   -1.5512 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0731    3.2182    0.5344 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4716    2.5776    0.2468 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4853    1.4246   -1.8758 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3616   -0.2367    1.7028 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1691    1.5113    1.6641 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7419    0.4773    1.8079 H   0  0  0  0  0  0  0  0  0  0  0  0
  5  6  1  0
 18 20  1  0
 20 21  1  0
 21 22  1  0
 22 24  1  0
  5 24  1  0
  7  8  1  0
  7 11  2  0
  8  9  1  0
 11 12  1  0
  8 10  1  0
 15 16  1  0
 13 14  1  0
 16 17  1  0
 24 25  1  1
 17 18  2  0
 22 23  1  0
 24 23  1  0
 19 18  1  0
  5  4  1  0
 12 13  2  0
  4  2  1  0
  6  7  1  0
  2  1  1  0
 13 15  1  0
  2  3  2  0
 12 40  1  0
  6 30  1  0
  6 31  1  0
 11 39  1  0
 15 44  1  0
 15 45  1  0
 16 46  1  0
 16 47  1  0
 17 48  1  0
 19 49  1  0
 19 50  1  0
 19 51  1  0
 20 52  1  0
 20 53  1  0
 21 54  1  0
 21 55  1  0
 22 56  1  6
  8 32  1  1
  9 33  1  0
  9 34  1  0
  9 35  1  0
 10 36  1  0
 10 37  1  0
 10 38  1  0
 14 41  1  0
 14 42  1  0
 14 43  1  0
 25 57  1  0
 25 58  1  0
 25 59  1  0
  5 29  1  1
  1 26  1  0
  1 27  1  0
  1 28  1  0
M  END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₂H₃₄O₃

Average Mass

346.5110 Da

Monoisotopic Mass

346.25079 Da

IUPAC Name

(1R,2S,4E,6E,10Z,14S)-1,7,11-trimethyl-4-(propan-2-yl)-15-oxabicyclo[12.1.0]pentadeca-4,6,10-trien-2-yl acetate

Traditional Name

(1R,2S,4E,6E,10Z,14S)-4-isopropyl-1,7,11-trimethyl-15-oxabicyclo[12.1.0]pentadeca-4,6,10-trien-2-yl acetate

CAS Registry Number

Not Available

SMILES

[H]/C1=C(C([H])([H])[H])\C([H])([H])C([H])([H])\C([H])=C(C([H])([H])[H])/C([H])([H])C([H])([H])[C@]2([H])O[C@@]2(C([H])([H])[H])[C@@]([H])(OC(=O)C([H])([H])[H])C([H])([H])/C(=C\1/[H])C([H])(C([H])([H])[H])C([H])([H])[H]

InChI Identifier

InChI=1S/C22H34O3/c1-15(2)19-12-10-16(3)8-7-9-17(4)11-13-20-22(6,25-20)21(14-19)24-18(5)23/h9-10,12,15,20-21H,7-8,11,13-14H2,1-6H3/b16-10+,17-9-,19-12+/t20-,21-,22+/m0/s1

InChI Key

DGDSKYGEKMVUCF-HESWHYPDSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Simularia gibberosa	-	KNApSAcK
Sinularia gibberosa	JEOL database	Ahmed, A. F., et al, J. Nat. Prod. 71, 179 (2008)

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	6.29	ALOGPS
logP	4.95	ChemAxon
logS	-4.9	ALOGPS
pKa (Strongest Basic)	-4.2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	38.83 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	104.43 m³·mol⁻¹	ChemAxon
Polarizability	40.64 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

Not Available

References

General References

Ahmed, A. F., et al. (2008). Ahmed, A. F., et al, J. Nat. Prod. 71, 179 (2008) . J. Nat. Prod..

Showing NP-Card for gibberosene B (NP0033507)

MOL for NP0033507 (gibberosene B)

3D MOL for NP0033507 (gibberosene B)

3D SDF for NP0033507 (gibberosene B)

3D-SDF for NP0033507 (gibberosene B)

PDB for NP0033507 (gibberosene B)

3D PDB for NP0033507 (gibberosene B)

SMILES for NP0033507 (gibberosene B)

INCHI for NP0033507 (gibberosene B)

Structure for NP0033507 (gibberosene B)

3D Structure for NP0033507 (gibberosene B)