NP-MRD: Showing NP-Card for salvidivin B (NP0032582)

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Record Information

Version

2.0

Created at

2021-06-19 23:20:44 UTC

Updated at

2021-06-30 00:01:52 UTC

NP-MRD ID

NP0032582

Secondary Accession Numbers

None

Natural Product Identification

Common Name

salvidivin B

Provided By

JEOL Database JEOL Logo

Description

salvidivin B is found in Salvia divinorum. salvidivin B was first documented in 2006 (Shirota, O., et al.).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306202101203D          

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M  END

     RDKit          3D

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M  END


  Mrv1652306202101203D          

 61 64  0  0  0  0            999 V2000
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    0.7974   -3.2647   -1.9577 H   0  0  0  0  0  0  0  0  0  0  0  0
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    0.5255   -6.0844    2.2833 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0333   -5.6461    3.1077 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0965   -6.1905    1.4165 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3109   -0.2883    0.3893 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.3974    0.6915    2.4497 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1914   -0.6539    3.2480 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.1419   -0.0207    2.3582 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3769   -1.5924    2.3060 H   0  0  0  0  0  0  0  0  0  0  0  0
 15 17  1  0  0  0  0
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 18 19  1  0  0  0  0
 32 19  1  0  0  0  0
 29 28  1  0  0  0  0
 28 26  1  0  0  0  0
 26 25  1  0  0  0  0
 25 24  2  0  0  0  0
  5 15  1  0  0  0  0
 26 27  1  0  0  0  0
 14 12  1  0  0  0  0
 20 21  2  0  0  0  0
 14 15  1  0  0  0  0
  5  3  1  0  0  0  0
 15 16  1  1  0  0  0
  7  6  1  0  0  0  0
 32 33  1  1  0  0  0
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  7  8  1  0  0  0  0
 32 31  1  0  0  0  0
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 19 20  1  0  0  0  0
 14 44  1  6  0  0  0
 20 22  1  0  0  0  0
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 22 23  1  0  0  0  0
 29 30  2  0  0  0  0
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  3  2  1  0  0  0  0
  6  5  1  0  0  0  0
  2  1  1  0  0  0  0
 23 24  1  0  0  0  0
  8  9  1  0  0  0  0
 14 32  1  0  0  0  0
  9 10  1  0  0  0  0
 12 13  2  0  0  0  0
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  3  4  2  0  0  0  0
  7 40  1  6  0  0  0
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  1 36  1  0  0  0  0
 10 41  1  0  0  0  0
 10 42  1  0  0  0  0
 10 43  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0032582

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@]1([H])OC(=O)C(=C1[H])[C@@]1([H])OC(=O)[C@]2([H])C([H])([H])C([H])([H])[C@@]3(C([H])([H])[H])[C@]([H])(C(=O)OC([H])([H])[H])C([H])([H])[C@]([H])(OC(=O)C([H])([H])[H])C(=O)[C@]3([H])[C@@]2(C([H])([H])[H])C1([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C23H28O10/c1-10(24)31-14-8-13(20(28)30-4)22(2)6-5-12-21(29)32-15(11-7-16(25)33-19(11)27)9-23(12,3)18(22)17(14)26/h7,12-16,18,25H,5-6,8-9H2,1-4H3/t12-,13-,14-,15-,16+,18-,22-,23-/m0/s1

> <INCHI_KEY>
WUYGOOXHDSWMJT-GFKRNPEWSA-N

> <FORMULA>
C23H28O10

> <MOLECULAR_WEIGHT>
464.467

> <EXACT_MASS>
464.168247102

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
61

> <JCHEM_AVERAGE_POLARIZABILITY>
46.351362365554365

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl (2S,4aR,6aR,7R,9S,10aS,10bR)-9-(acetyloxy)-2-[(5R)-5-hydroxy-2-oxo-2,5-dihydrofuran-3-yl]-6a,10b-dimethyl-4,10-dioxo-dodecahydro-1H-naphtho[2,1-c]pyran-7-carboxylate

> <ALOGPS_LOGP>
0.71

> <JCHEM_LOGP>
1.3300432666666657

> <ALOGPS_LOGS>
-2.84

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
15.327732427443564

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.780845634273359

> <JCHEM_PKA_STRONGEST_BASIC>
-4.168071322101279

> <JCHEM_POLAR_SURFACE_AREA>
142.50000000000003

> <JCHEM_REFRACTIVITY>
109.01719999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
6.71e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
methyl (2S,4aR,6aR,7R,9S,10aS,10bR)-9-(acetyloxy)-2-[(5R)-5-hydroxy-2-oxo-5H-furan-3-yl]-6a,10b-dimethyl-4,10-dioxo-octahydro-1H-naphtho[2,1-c]pyran-7-carboxylate

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 61 64  0  0  0  0  0  0  0  0999 V2000
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   -1.1914   -0.6539    3.2480 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1176   -0.9018    0.8687 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1419   -0.0207    2.3582 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3769   -1.5924    2.3060 H   0  0  0  0  0  0  0  0  0  0  0  0
 15 17  1  0
 17 18  1  0
 18 19  1  0
 32 19  1  0
 29 28  1  0
 28 26  1  0
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 25 24  2  0
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 26 27  1  0
 14 12  1  0
 20 21  2  0
 14 15  1  0
  5  3  1  0
 15 16  1  1
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 32 33  1  1
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 32 31  1  0
 23 53  1  1
 19 20  1  0
 14 44  1  6
 20 22  1  0
 19 52  1  6
 22 23  1  0
 29 30  2  0
 23 31  1  0
  3  2  1  0
  6  5  1  0
  2  1  1  0
 23 24  1  0
  8  9  1  0
 14 32  1  0
  9 10  1  0
 12 13  2  0
  9 11  2  0
 24 29  1  0
  3  4  2  0
  7 40  1  6
  6 38  1  0
  6 39  1  0
  5 37  1  6
 17 48  1  0
 17 49  1  0
 18 50  1  0
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 31 57  1  0
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 26 55  1  1
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 16 45  1  0
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 33 59  1  0
 33 60  1  0
 33 61  1  0
  1 34  1  0
  1 35  1  0
  1 36  1  0
 10 41  1  0
 10 42  1  0
 10 43  1  0
M  END

HEADER    PROTEIN                                 20-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   20-JUN-21         0                                  
HETATM    1  C   UNK     0      -0.585  -0.431  -5.428  0.00  0.00           C+0
HETATM    2  O   UNK     0      -0.392  -0.438  -4.012  0.00  0.00           O+0
HETATM    3  C   UNK     0      -0.735  -1.611  -3.411  0.00  0.00           C+0
HETATM    4  O   UNK     0      -1.161  -2.599  -3.992  0.00  0.00           O+0
HETATM    5  C   UNK     0      -0.503  -1.518  -1.906  0.00  0.00           C+0
HETATM    6  C   UNK     0      -0.060  -2.897  -1.378  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.325  -2.842   0.099  0.00  0.00           C+0
HETATM    8  O   UNK     0       0.638  -4.164   0.534  0.00  0.00           O+0
HETATM    9  C   UNK     0       1.355  -4.211   1.693  0.00  0.00           C+0
HETATM   10  C   UNK     0       1.510  -5.629   2.148  0.00  0.00           C+0
HETATM   11  O   UNK     0       1.827  -3.240   2.267  0.00  0.00           O+0
HETATM   12  C   UNK     0      -0.845  -2.235   0.885  0.00  0.00           C+0
HETATM   13  O   UNK     0      -1.394  -2.823   1.813  0.00  0.00           O+0
HETATM   14  C   UNK     0      -1.266  -0.841   0.409  0.00  0.00           C+0
HETATM   15  C   UNK     0      -1.723  -0.932  -1.095  0.00  0.00           C+0
HETATM   16  C   UNK     0      -2.961  -1.838  -1.304  0.00  0.00           C+0
HETATM   17  C   UNK     0      -2.060   0.496  -1.601  0.00  0.00           C+0
HETATM   18  C   UNK     0      -2.962   1.302  -0.660  0.00  0.00           C+0
HETATM   19  C   UNK     0      -2.358   1.388   0.746  0.00  0.00           C+0
HETATM   20  C   UNK     0      -3.115   2.342   1.648  0.00  0.00           C+0
HETATM   21  O   UNK     0      -3.987   3.102   1.244  0.00  0.00           O+0
HETATM   22  O   UNK     0      -2.666   2.411   2.922  0.00  0.00           O+0
HETATM   23  C   UNK     0      -2.120   1.265   3.618  0.00  0.00           C+0
HETATM   24  C   UNK     0      -1.227   1.769   4.697  0.00  0.00           C+0
HETATM   25  C   UNK     0      -0.648   2.952   4.900  0.00  0.00           C+0
HETATM   26  C   UNK     0       0.128   2.951   6.148  0.00  0.00           C+0
HETATM   27  O   UNK     0       1.480   3.184   5.830  0.00  0.00           O+0
HETATM   28  O   UNK     0      -0.044   1.649   6.677  0.00  0.00           O+0
HETATM   29  C   UNK     0      -0.860   0.943   5.850  0.00  0.00           C+0
HETATM   30  O   UNK     0      -1.244  -0.196   6.042  0.00  0.00           O+0
HETATM   31  C   UNK     0      -1.384   0.277   2.702  0.00  0.00           C+0
HETATM   32  C   UNK     0      -2.161  -0.002   1.388  0.00  0.00           C+0
HETATM   33  C   UNK     0      -3.512  -0.668   1.739  0.00  0.00           C+0
HETATM   34  H   UNK     0      -1.640  -0.591  -5.671  0.00  0.00           H+0
HETATM   35  H   UNK     0       0.044  -1.190  -5.903  0.00  0.00           H+0
HETATM   36  H   UNK     0      -0.287   0.551  -5.805  0.00  0.00           H+0
HETATM   37  H   UNK     0       0.360  -0.847  -1.775  0.00  0.00           H+0
HETATM   38  H   UNK     0       0.797  -3.265  -1.958  0.00  0.00           H+0
HETATM   39  H   UNK     0      -0.846  -3.648  -1.532  0.00  0.00           H+0
HETATM   40  H   UNK     0       1.199  -2.187   0.212  0.00  0.00           H+0
HETATM   41  H   UNK     0       0.526  -6.084   2.283  0.00  0.00           H+0
HETATM   42  H   UNK     0       2.033  -5.646   3.108  0.00  0.00           H+0
HETATM   43  H   UNK     0       2.096  -6.191   1.417  0.00  0.00           H+0
HETATM   44  H   UNK     0      -0.311  -0.288   0.389  0.00  0.00           H+0
HETATM   45  H   UNK     0      -3.081  -2.120  -2.355  0.00  0.00           H+0
HETATM   46  H   UNK     0      -3.897  -1.341  -1.048  0.00  0.00           H+0
HETATM   47  H   UNK     0      -2.904  -2.764  -0.724  0.00  0.00           H+0
HETATM   48  H   UNK     0      -1.129   1.062  -1.737  0.00  0.00           H+0
HETATM   49  H   UNK     0      -2.540   0.449  -2.587  0.00  0.00           H+0
HETATM   50  H   UNK     0      -3.972   0.880  -0.627  0.00  0.00           H+0
HETATM   51  H   UNK     0      -3.076   2.310  -1.077  0.00  0.00           H+0
HETATM   52  H   UNK     0      -1.373   1.867   0.623  0.00  0.00           H+0
HETATM   53  H   UNK     0      -2.976   0.770   4.093  0.00  0.00           H+0
HETATM   54  H   UNK     0      -0.725   3.807   4.245  0.00  0.00           H+0
HETATM   55  H   UNK     0      -0.233   3.702   6.858  0.00  0.00           H+0
HETATM   56  H   UNK     0       1.936   3.249   6.685  0.00  0.00           H+0
HETATM   57  H   UNK     0      -0.397   0.692   2.450  0.00  0.00           H+0
HETATM   58  H   UNK     0      -1.191  -0.654   3.248  0.00  0.00           H+0
HETATM   59  H   UNK     0      -4.118  -0.902   0.869  0.00  0.00           H+0
HETATM   60  H   UNK     0      -4.142  -0.021   2.358  0.00  0.00           H+0
HETATM   61  H   UNK     0      -3.377  -1.592   2.306  0.00  0.00           H+0
CONECT    1    2   34   35   36                                             
CONECT    2    3    1                                                       
CONECT    3    5    2    4                                                  
CONECT    4    3                                                            
CONECT    5   15    3    6   37                                             
CONECT    6    7    5   38   39                                             
CONECT    7    6   12    8   40                                             
CONECT    8    7    9                                                       
CONECT    9    8   10   11                                                  
CONECT   10    9   41   42   43                                             
CONECT   11    9                                                            
CONECT   12   14    7   13                                                  
CONECT   13   12                                                            
CONECT   14   12   15   44   32                                             
CONECT   15   17    5   14   16                                             
CONECT   16   15   45   46   47                                             
CONECT   17   15   18   48   49                                             
CONECT   18   17   19   50   51                                             
CONECT   19   18   32   20   52                                             
CONECT   20   21   19   22                                                  
CONECT   21   20                                                            
CONECT   22   20   23                                                       
CONECT   23   53   22   31   24                                             
CONECT   24   25   23   29                                                  
CONECT   25   26   24   54                                                  
CONECT   26   28   25   27   55                                             
CONECT   27   26   56                                                       
CONECT   28   29   26                                                       
CONECT   29   28   30   24                                                  
CONECT   30   29                                                            
CONECT   31   32   23   57   58                                             
CONECT   32   19   33   31   14                                             
CONECT   33   32   59   60   61                                             
CONECT   34    1                                                            
CONECT   35    1                                                            
CONECT   36    1                                                            
CONECT   37    5                                                            
CONECT   38    6                                                            
CONECT   39    6                                                            
CONECT   40    7                                                            
CONECT   41   10                                                            
CONECT   42   10                                                            
CONECT   43   10                                                            
CONECT   44   14                                                            
CONECT   45   16                                                            
CONECT   46   16                                                            
CONECT   47   16                                                            
CONECT   48   17                                                            
CONECT   49   17                                                            
CONECT   50   18                                                            
CONECT   51   18                                                            
CONECT   52   19                                                            
CONECT   53   23                                                            
CONECT   54   25                                                            
CONECT   55   26                                                            
CONECT   56   27                                                            
CONECT   57   31                                                            
CONECT   58   31                                                            
CONECT   59   33                                                            
CONECT   60   33                                                            
CONECT   61   33                                                            
MASTER        0    0    0    0    0    0    0    0   61    0  128    0
END

RDKit          3D

61 64  0  0  0  0  0  0  0  0999 V2000
   -0.5846   -0.4313   -5.4277 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3919   -0.4384   -4.0119 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7352   -1.6114   -3.4114 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1608   -2.5995   -3.9918 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5033   -1.5179   -1.9064 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.0597   -2.8972   -1.3776 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3250   -2.8419    0.0986 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.6380   -4.1644    0.5344 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3550   -4.2111    1.6926 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5098   -5.6290    2.1476 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8270   -3.2395    2.2666 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8448   -2.2348    0.8853 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3937   -2.8227    1.8130 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2664   -0.8405    0.4085 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.7233   -0.9316   -1.0950 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.9614   -1.8383   -1.3041 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0604    0.4960   -1.6011 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9618    1.3015   -0.6596 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3581    1.3883    0.7461 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.1154    2.3425    1.6478 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9872    3.1023    1.2435 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6657    2.4111    2.9225 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1205    1.2646    3.6177 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.2272    1.7693    4.6972 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6484    2.9523    4.9004 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1276    2.9508    6.1476 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.4799    3.1840    5.8296 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0443    1.6493    6.6773 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8601    0.9433    5.8499 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2441   -0.1956    6.0421 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3843    0.2772    2.7020 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1609   -0.0017    1.3884 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.5116   -0.6676    1.7392 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6396   -0.5910   -5.6712 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0439   -1.1905   -5.9034 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2871    0.5510   -5.8047 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3598   -0.8474   -1.7754 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7974   -3.2647   -1.9577 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8462   -3.6475   -1.5321 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1986   -2.1869    0.2120 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5255   -6.0844    2.2833 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0333   -5.6461    3.1077 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0965   -6.1905    1.4165 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3109   -0.2883    0.3893 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0814   -2.1205   -2.3546 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8972   -1.3405   -1.0481 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9044   -2.7640   -0.7243 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1288    1.0615   -1.7372 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5399    0.4490   -2.5866 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9720    0.8798   -0.6273 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0763    2.3103   -1.0767 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3733    1.8671    0.6230 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9758    0.7704    4.0933 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7250    3.8071    4.2454 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2326    3.7020    6.8577 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9360    3.2492    6.6850 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3974    0.6915    2.4497 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1914   -0.6539    3.2480 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1176   -0.9018    0.8687 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1419   -0.0207    2.3582 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3769   -1.5924    2.3060 H   0  0  0  0  0  0  0  0  0  0  0  0
 15 17  1  0
 17 18  1  0
 18 19  1  0
 32 19  1  0
 29 28  1  0
 28 26  1  0
 26 25  1  0
 25 24  2  0
  5 15  1  0
 26 27  1  0
 14 12  1  0
 20 21  2  0
 14 15  1  0
  5  3  1  0
 15 16  1  1
  7  6  1  0
 32 33  1  1
  7 12  1  0
  7  8  1  0
 32 31  1  0
 23 53  1  1
 19 20  1  0
 14 44  1  6
 20 22  1  0
 19 52  1  6
 22 23  1  0
 29 30  2  0
 23 31  1  0
  3  2  1  0
  6  5  1  0
  2  1  1  0
 23 24  1  0
  8  9  1  0
 14 32  1  0
  9 10  1  0
 12 13  2  0
  9 11  2  0
 24 29  1  0
  3  4  2  0
  7 40  1  6
  6 38  1  0
  6 39  1  0
  5 37  1  6
 17 48  1  0
 17 49  1  0
 18 50  1  0
 18 51  1  0
 31 57  1  0
 31 58  1  0
 26 55  1  1
 25 54  1  0
 27 56  1  0
 16 45  1  0
 16 46  1  0
 16 47  1  0
 33 59  1  0
 33 60  1  0
 33 61  1  0
  1 34  1  0
  1 35  1  0
  1 36  1  0
 10 41  1  0
 10 42  1  0
 10 43  1  0
M  END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₃H₂₈O₁₀

Average Mass

464.4670 Da

Monoisotopic Mass

464.16825 Da

IUPAC Name

methyl (2S,4aR,6aR,7R,9S,10aS,10bR)-9-(acetyloxy)-2-[(5R)-5-hydroxy-2-oxo-2,5-dihydrofuran-3-yl]-6a,10b-dimethyl-4,10-dioxo-dodecahydro-1H-naphtho[2,1-c]pyran-7-carboxylate

Traditional Name

methyl (2S,4aR,6aR,7R,9S,10aS,10bR)-9-(acetyloxy)-2-[(5R)-5-hydroxy-2-oxo-5H-furan-3-yl]-6a,10b-dimethyl-4,10-dioxo-octahydro-1H-naphtho[2,1-c]pyran-7-carboxylate

CAS Registry Number

Not Available

SMILES

[H]O[C@]1([H])OC(=O)C(=C1[H])[C@@]1([H])OC(=O)[C@]2([H])C([H])([H])C([H])([H])[C@@]3(C([H])([H])[H])[C@]([H])(C(=O)OC([H])([H])[H])C([H])([H])[C@]([H])(OC(=O)C([H])([H])[H])C(=O)[C@]3([H])[C@@]2(C([H])([H])[H])C1([H])[H]

InChI Identifier

InChI=1S/C23H28O10/c1-10(24)31-14-8-13(20(28)30-4)22(2)6-5-12-21(29)32-15(11-7-16(25)33-19(11)27)9-23(12,3)18(22)17(14)26/h7,12-16,18,25H,5-6,8-9H2,1-4H3/t12-,13-,14-,15-,16+,18-,22-,23-/m0/s1

InChI Key

WUYGOOXHDSWMJT-GFKRNPEWSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, CDCl₃ + CD₃OD ( 1 : 1 ), simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Salvia divinorum	JEOL database	Shirota, O., et al, J. Nat. Prod. 69, 1782 (2006)

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.71	ALOGPS
logP	1.33	ChemAxon
logS	-2.8	ALOGPS
pKa (Strongest Acidic)	11.78	ChemAxon
pKa (Strongest Basic)	-4.2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	142.5 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	109.02 m³·mol⁻¹	ChemAxon
Polarizability	46.35 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

Not Available

References

General References

Shirota, O., et al. (2006). Shirota, O., et al, J. Nat. Prod. 69, 1782 (2006) . J. Nat. Prod..

Showing NP-Card for salvidivin B (NP0032582)

MOL for NP0032582 (salvidivin B)

3D MOL for NP0032582 (salvidivin B)

3D SDF for NP0032582 (salvidivin B)

3D-SDF for NP0032582 (salvidivin B)

PDB for NP0032582 (salvidivin B)

3D PDB for NP0032582 (salvidivin B)

SMILES for NP0032582 (salvidivin B)

INCHI for NP0032582 (salvidivin B)

Structure for NP0032582 (salvidivin B)

3D Structure for NP0032582 (salvidivin B)