NP-MRD: Showing NP-Card for (1R,2S,4R,5R,9S)-4,5-epoxy-13-norcaryophyllan-8-one (NP0032439)

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Record Information

Version

2.0

Created at

2021-06-19 23:14:35 UTC

Updated at

2021-06-30 00:01:37 UTC

NP-MRD ID

NP0032439

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1R,2S,4R,5R,9S)-4,5-epoxy-13-norcaryophyllan-8-one

Provided By

JEOL Database JEOL Logo

Description

CHEMBL463195 belongs to the class of organic compounds known as cyclic alcohols and derivatives. These are organic compounds containing an aliphatic ring substituted with at least one hydroxyl group. (1R,2S,4R,5R,9S)-4,5-epoxy-13-norcaryophyllan-8-one is found in Rhizopus stolonifer. (1R,2S,4R,5R,9S)-4,5-epoxy-13-norcaryophyllan-8-one was first documented in 2006 (Choudhary, M. I., et al.). Based on a literature review very few articles have been published on CHEMBL463195.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306202101143D          

 39 41  0  0  0  0            999 V2000
    2.9077   -0.3180    3.4980 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9701   -0.9821    2.4904 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.8589   -1.7570    3.2066 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7088   -1.8667    1.4559 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8169   -1.2641    0.3368 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5405   -1.0204   -1.0298 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7094   -0.6254   -1.1227 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7323   -1.2367   -2.2996 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3902    0.0927   -2.9709 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.0354    1.1331   -1.9650 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1068    1.9507   -2.2046 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2144    1.0165   -1.1106 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.3119    0.0237   -1.3628 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1323    1.6188    0.2620 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.1624    0.5953    1.3687 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0512    1.2791    2.6218 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5620   -0.0349    1.2876 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7303    0.2066    2.9997 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3694    0.4139    4.1093 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3490   -1.0613    4.1708 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1760   -2.2413    2.5009 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2656   -1.0972    3.8478 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2830   -2.5415    3.8435 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6127   -2.9493    1.5881 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7764   -1.6377    1.3495 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9076   -1.8671    0.2046 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3038   -1.8796   -2.9777 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8204   -1.7874   -2.0494 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2615    0.4459   -3.5358 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5888   -0.0577   -3.7028 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9134    1.6311   -1.5668 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2715    0.4237   -1.0186 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4200   -0.2133   -2.4261 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1246   -0.9123   -0.8297 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6227    2.4159    0.2945 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0825    2.1216    0.4857 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6062   -0.1839    1.3710 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7242    1.9820    2.6453 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3115    0.7560    1.1256 H   0  0  0  0  0  0  0  0  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 14 15  1  0  0  0  0
 14 12  1  0  0  0  0
 12 10  1  0  0  0  0
  2  4  1  0  0  0  0
  2  1  1  1  0  0  0
  4  5  1  0  0  0  0
 17 39  1  6  0  0  0
 17  2  1  0  0  0  0
 12 11  1  0  0  0  0
  2  3  1  0  0  0  0
  5 17  1  0  0  0  0
  5 26  1  6  0  0  0
 17 15  1  0  0  0  0
 12 13  1  1  0  0  0
 10 11  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  6  8  1  0  0  0  0
 15 16  1  0  0  0  0
  4 24  1  0  0  0  0
  4 25  1  0  0  0  0
 15 37  1  1  0  0  0
  8 27  1  0  0  0  0
  8 28  1  0  0  0  0
  9 29  1  0  0  0  0
  9 30  1  0  0  0  0
 10 31  1  1  0  0  0
 14 35  1  0  0  0  0
 14 36  1  0  0  0  0
  1 18  1  0  0  0  0
  1 19  1  0  0  0  0
  1 20  1  0  0  0  0
  3 21  1  0  0  0  0
  3 22  1  0  0  0  0
  3 23  1  0  0  0  0
 13 32  1  0  0  0  0
 13 33  1  0  0  0  0
 13 34  1  0  0  0  0
 16 38  1  0  0  0  0
M  END

     RDKit          3D

 39 41  0  0  0  0  0  0  0  0999 V2000
    2.9077   -0.3180    3.4980 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9701   -0.9821    2.4904 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.8589   -1.7570    3.2066 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7088   -1.8667    1.4559 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8169   -1.2641    0.3368 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5405   -1.0204   -1.0298 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7094   -0.6254   -1.1227 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7323   -1.2367   -2.2996 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3902    0.0927   -2.9709 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0354    1.1331   -1.9650 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1068    1.9507   -2.2046 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2144    1.0165   -1.1106 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.3119    0.0237   -1.3628 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1323    1.6188    0.2620 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1624    0.5953    1.3687 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0512    1.2791    2.6218 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5620   -0.0349    1.2876 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7303    0.2066    2.9997 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3694    0.4139    4.1093 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3490   -1.0613    4.1708 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1760   -2.2413    2.5009 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2656   -1.0972    3.8478 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2830   -2.5415    3.8435 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6127   -2.9493    1.5881 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7764   -1.6377    1.3495 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9076   -1.8671    0.2046 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3038   -1.8796   -2.9777 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8204   -1.7874   -2.0494 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2615    0.4459   -3.5358 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5888   -0.0577   -3.7028 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9134    1.6311   -1.5668 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2715    0.4237   -1.0186 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4200   -0.2133   -2.4261 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1246   -0.9123   -0.8297 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6227    2.4159    0.2945 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0825    2.1216    0.4857 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6062   -0.1839    1.3710 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7242    1.9820    2.6453 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3115    0.7560    1.1256 H   0  0  0  0  0  0  0  0  0  0  0  0
  8  9  1  0
  9 10  1  0
 14 15  1  0
 14 12  1  0
 12 10  1  0
  2  4  1  0
  2  1  1  1
  4  5  1  0
 17 39  1  6
 17  2  1  0
 12 11  1  0
  2  3  1  0
  5 17  1  0
  5 26  1  6
 17 15  1  0
 12 13  1  1
 10 11  1  0
  5  6  1  0
  6  7  2  0
  6  8  1  0
 15 16  1  0
  4 24  1  0
  4 25  1  0
 15 37  1  1
  8 27  1  0
  8 28  1  0
  9 29  1  0
  9 30  1  0
 10 31  1  1
 14 35  1  0
 14 36  1  0
  1 18  1  0
  1 19  1  0
  1 20  1  0
  3 21  1  0
  3 22  1  0
  3 23  1  0
 13 32  1  0
 13 33  1  0
 13 34  1  0
 16 38  1  0
M  END


  Mrv1652306202101143D          

 39 41  0  0  0  0            999 V2000
    2.9077   -0.3180    3.4980 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9701   -0.9821    2.4904 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.8589   -1.7570    3.2066 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7088   -1.8667    1.4559 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8169   -1.2641    0.3368 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5405   -1.0204   -1.0298 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7094   -0.6254   -1.1227 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7323   -1.2367   -2.2996 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3902    0.0927   -2.9709 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.0354    1.1331   -1.9650 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1068    1.9507   -2.2046 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2144    1.0165   -1.1106 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.3119    0.0237   -1.3628 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1323    1.6188    0.2620 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.1624    0.5953    1.3687 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0512    1.2791    2.6218 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5620   -0.0349    1.2876 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7303    0.2066    2.9997 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3694    0.4139    4.1093 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3490   -1.0613    4.1708 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1760   -2.2413    2.5009 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2656   -1.0972    3.8478 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2830   -2.5415    3.8435 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6127   -2.9493    1.5881 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7764   -1.6377    1.3495 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9076   -1.8671    0.2046 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3038   -1.8796   -2.9777 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8204   -1.7874   -2.0494 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2615    0.4459   -3.5358 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5888   -0.0577   -3.7028 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9134    1.6311   -1.5668 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2715    0.4237   -1.0186 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4200   -0.2133   -2.4261 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1246   -0.9123   -0.8297 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6227    2.4159    0.2945 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0825    2.1216    0.4857 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6062   -0.1839    1.3710 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7242    1.9820    2.6453 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3115    0.7560    1.1256 H   0  0  0  0  0  0  0  0  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 14 15  1  0  0  0  0
 14 12  1  0  0  0  0
 12 10  1  0  0  0  0
  2  4  1  0  0  0  0
  2  1  1  1  0  0  0
  4  5  1  0  0  0  0
 17 39  1  6  0  0  0
 17  2  1  0  0  0  0
 12 11  1  0  0  0  0
  2  3  1  0  0  0  0
  5 17  1  0  0  0  0
  5 26  1  6  0  0  0
 17 15  1  0  0  0  0
 12 13  1  1  0  0  0
 10 11  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  6  8  1  0  0  0  0
 15 16  1  0  0  0  0
  4 24  1  0  0  0  0
  4 25  1  0  0  0  0
 15 37  1  1  0  0  0
  8 27  1  0  0  0  0
  8 28  1  0  0  0  0
  9 29  1  0  0  0  0
  9 30  1  0  0  0  0
 10 31  1  1  0  0  0
 14 35  1  0  0  0  0
 14 36  1  0  0  0  0
  1 18  1  0  0  0  0
  1 19  1  0  0  0  0
  1 20  1  0  0  0  0
  3 21  1  0  0  0  0
  3 22  1  0  0  0  0
  3 23  1  0  0  0  0
 13 32  1  0  0  0  0
 13 33  1  0  0  0  0
 13 34  1  0  0  0  0
 16 38  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0032439

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@@]1([H])C([H])([H])[C@]2(O[C@]2([H])C([H])([H])C([H])([H])C(=O)[C@@]2([H])C([H])([H])C(C([H])([H])[H])(C([H])([H])[H])[C@]12[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C14H22O3/c1-13(2)6-8-9(15)4-5-11-14(3,17-11)7-10(16)12(8)13/h8,10-12,16H,4-7H2,1-3H3/t8-,10+,11-,12+,14-/m1/s1

> <INCHI_KEY>
LPQILJLNNPWGIC-KSXHLQSHSA-N

> <FORMULA>
C14H22O3

> <MOLECULAR_WEIGHT>
238.327

> <EXACT_MASS>
238.156894568

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
39

> <JCHEM_AVERAGE_POLARIZABILITY>
26.19117372566284

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,2S,4R,6R,10S)-2-hydroxy-4,12,12-trimethyl-5-oxatricyclo[8.2.0.0^{4,6}]dodecan-9-one

> <ALOGPS_LOGP>
1.28

> <JCHEM_LOGP>
1.3743452516666665

> <ALOGPS_LOGS>
-2.10

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
17.903415835518388

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.810855969793508

> <JCHEM_PKA_STRONGEST_BASIC>
-2.8813430716638004

> <JCHEM_POLAR_SURFACE_AREA>
49.83

> <JCHEM_REFRACTIVITY>
64.10300000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.90e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2S,4R,6R,10S)-2-hydroxy-4,12,12-trimethyl-5-oxatricyclo[8.2.0.0^{4,6}]dodecan-9-one

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 39 41  0  0  0  0  0  0  0  0999 V2000
    2.9077   -0.3180    3.4980 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9701   -0.9821    2.4904 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.8589   -1.7570    3.2066 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7088   -1.8667    1.4559 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8169   -1.2641    0.3368 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5405   -1.0204   -1.0298 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7094   -0.6254   -1.1227 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7323   -1.2367   -2.2996 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3902    0.0927   -2.9709 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0354    1.1331   -1.9650 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1068    1.9507   -2.2046 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2144    1.0165   -1.1106 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.3119    0.0237   -1.3628 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1323    1.6188    0.2620 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1624    0.5953    1.3687 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0512    1.2791    2.6218 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5620   -0.0349    1.2876 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7303    0.2066    2.9997 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3694    0.4139    4.1093 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3490   -1.0613    4.1708 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1760   -2.2413    2.5009 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2656   -1.0972    3.8478 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2830   -2.5415    3.8435 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6127   -2.9493    1.5881 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7764   -1.6377    1.3495 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9076   -1.8671    0.2046 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3038   -1.8796   -2.9777 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8204   -1.7874   -2.0494 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2615    0.4459   -3.5358 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5888   -0.0577   -3.7028 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9134    1.6311   -1.5668 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2715    0.4237   -1.0186 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4200   -0.2133   -2.4261 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1246   -0.9123   -0.8297 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6227    2.4159    0.2945 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0825    2.1216    0.4857 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6062   -0.1839    1.3710 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7242    1.9820    2.6453 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3115    0.7560    1.1256 H   0  0  0  0  0  0  0  0  0  0  0  0
  8  9  1  0
  9 10  1  0
 14 15  1  0
 14 12  1  0
 12 10  1  0
  2  4  1  0
  2  1  1  1
  4  5  1  0
 17 39  1  6
 17  2  1  0
 12 11  1  0
  2  3  1  0
  5 17  1  0
  5 26  1  6
 17 15  1  0
 12 13  1  1
 10 11  1  0
  5  6  1  0
  6  7  2  0
  6  8  1  0
 15 16  1  0
  4 24  1  0
  4 25  1  0
 15 37  1  1
  8 27  1  0
  8 28  1  0
  9 29  1  0
  9 30  1  0
 10 31  1  1
 14 35  1  0
 14 36  1  0
  1 18  1  0
  1 19  1  0
  1 20  1  0
  3 21  1  0
  3 22  1  0
  3 23  1  0
 13 32  1  0
 13 33  1  0
 13 34  1  0
 16 38  1  0
M  END

HEADER    PROTEIN                                 20-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   20-JUN-21         0                                  
HETATM    1  C   UNK     0       2.908  -0.318   3.498  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.970  -0.982   2.490  0.00  0.00           C+0
HETATM    3  C   UNK     0       0.859  -1.757   3.207  0.00  0.00           C+0
HETATM    4  C   UNK     0       2.709  -1.867   1.456  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.817  -1.264   0.337  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.541  -1.020  -1.030  0.00  0.00           C+0
HETATM    7  O   UNK     0       3.709  -0.625  -1.123  0.00  0.00           O+0
HETATM    8  C   UNK     0       1.732  -1.237  -2.300  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.390   0.093  -2.971  0.00  0.00           C+0
HETATM   10  C   UNK     0       1.035   1.133  -1.965  0.00  0.00           C+0
HETATM   11  O   UNK     0      -0.107   1.951  -2.205  0.00  0.00           O+0
HETATM   12  C   UNK     0      -0.214   1.016  -1.111  0.00  0.00           C+0
HETATM   13  C   UNK     0      -1.312   0.024  -1.363  0.00  0.00           C+0
HETATM   14  C   UNK     0      -0.132   1.619   0.262  0.00  0.00           C+0
HETATM   15  C   UNK     0       0.162   0.595   1.369  0.00  0.00           C+0
HETATM   16  O   UNK     0       0.051   1.279   2.622  0.00  0.00           O+0
HETATM   17  C   UNK     0       1.562  -0.035   1.288  0.00  0.00           C+0
HETATM   18  H   UNK     0       3.730   0.207   3.000  0.00  0.00           H+0
HETATM   19  H   UNK     0       2.369   0.414   4.109  0.00  0.00           H+0
HETATM   20  H   UNK     0       3.349  -1.061   4.171  0.00  0.00           H+0
HETATM   21  H   UNK     0       0.176  -2.241   2.501  0.00  0.00           H+0
HETATM   22  H   UNK     0       0.266  -1.097   3.848  0.00  0.00           H+0
HETATM   23  H   UNK     0       1.283  -2.542   3.844  0.00  0.00           H+0
HETATM   24  H   UNK     0       2.613  -2.949   1.588  0.00  0.00           H+0
HETATM   25  H   UNK     0       3.776  -1.638   1.349  0.00  0.00           H+0
HETATM   26  H   UNK     0       0.908  -1.867   0.205  0.00  0.00           H+0
HETATM   27  H   UNK     0       2.304  -1.880  -2.978  0.00  0.00           H+0
HETATM   28  H   UNK     0       0.820  -1.787  -2.049  0.00  0.00           H+0
HETATM   29  H   UNK     0       2.261   0.446  -3.536  0.00  0.00           H+0
HETATM   30  H   UNK     0       0.589  -0.058  -3.703  0.00  0.00           H+0
HETATM   31  H   UNK     0       1.913   1.631  -1.567  0.00  0.00           H+0
HETATM   32  H   UNK     0      -2.272   0.424  -1.019  0.00  0.00           H+0
HETATM   33  H   UNK     0      -1.420  -0.213  -2.426  0.00  0.00           H+0
HETATM   34  H   UNK     0      -1.125  -0.912  -0.830  0.00  0.00           H+0
HETATM   35  H   UNK     0       0.623   2.416   0.295  0.00  0.00           H+0
HETATM   36  H   UNK     0      -1.083   2.122   0.486  0.00  0.00           H+0
HETATM   37  H   UNK     0      -0.606  -0.184   1.371  0.00  0.00           H+0
HETATM   38  H   UNK     0       0.724   1.982   2.645  0.00  0.00           H+0
HETATM   39  H   UNK     0       2.312   0.756   1.126  0.00  0.00           H+0
CONECT    1    2   18   19   20                                             
CONECT    2    4    1   17    3                                             
CONECT    3    2   21   22   23                                             
CONECT    4    2    5   24   25                                             
CONECT    5    4   17   26    6                                             
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    9    6   27   28                                             
CONECT    9    8   10   29   30                                             
CONECT   10    9   12   11   31                                             
CONECT   11   12   10                                                       
CONECT   12   14   10   11   13                                             
CONECT   13   12   32   33   34                                             
CONECT   14   15   12   35   36                                             
CONECT   15   14   17   16   37                                             
CONECT   16   15   38                                                       
CONECT   17   39    2    5   15                                             
CONECT   18    1                                                            
CONECT   19    1                                                            
CONECT   20    1                                                            
CONECT   21    3                                                            
CONECT   22    3                                                            
CONECT   23    3                                                            
CONECT   24    4                                                            
CONECT   25    4                                                            
CONECT   26    5                                                            
CONECT   27    8                                                            
CONECT   28    8                                                            
CONECT   29    9                                                            
CONECT   30    9                                                            
CONECT   31   10                                                            
CONECT   32   13                                                            
CONECT   33   13                                                            
CONECT   34   13                                                            
CONECT   35   14                                                            
CONECT   36   14                                                            
CONECT   37   15                                                            
CONECT   38   16                                                            
CONECT   39   17                                                            
MASTER        0    0    0    0    0    0    0    0   39    0   82    0
END

RDKit          3D

39 41  0  0  0  0  0  0  0  0999 V2000
    2.9077   -0.3180    3.4980 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9701   -0.9821    2.4904 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.8589   -1.7570    3.2066 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7088   -1.8667    1.4559 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8169   -1.2641    0.3368 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5405   -1.0204   -1.0298 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7094   -0.6254   -1.1227 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7323   -1.2367   -2.2996 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3902    0.0927   -2.9709 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0354    1.1331   -1.9650 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1068    1.9507   -2.2046 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2144    1.0165   -1.1106 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.3119    0.0237   -1.3628 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1323    1.6188    0.2620 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1624    0.5953    1.3687 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0512    1.2791    2.6218 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5620   -0.0349    1.2876 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7303    0.2066    2.9997 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3694    0.4139    4.1093 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3490   -1.0613    4.1708 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1760   -2.2413    2.5009 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2656   -1.0972    3.8478 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2830   -2.5415    3.8435 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6127   -2.9493    1.5881 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7764   -1.6377    1.3495 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9076   -1.8671    0.2046 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3038   -1.8796   -2.9777 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8204   -1.7874   -2.0494 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2615    0.4459   -3.5358 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5888   -0.0577   -3.7028 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9134    1.6311   -1.5668 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2715    0.4237   -1.0186 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4200   -0.2133   -2.4261 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1246   -0.9123   -0.8297 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6227    2.4159    0.2945 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0825    2.1216    0.4857 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6062   -0.1839    1.3710 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7242    1.9820    2.6453 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3115    0.7560    1.1256 H   0  0  0  0  0  0  0  0  0  0  0  0
  8  9  1  0
  9 10  1  0
 14 15  1  0
 14 12  1  0
 12 10  1  0
  2  4  1  0
  2  1  1  1
  4  5  1  0
 17 39  1  6
 17  2  1  0
 12 11  1  0
  2  3  1  0
  5 17  1  0
  5 26  1  6
 17 15  1  0
 12 13  1  1
 10 11  1  0
  5  6  1  0
  6  7  2  0
  6  8  1  0
 15 16  1  0
  4 24  1  0
  4 25  1  0
 15 37  1  1
  8 27  1  0
  8 28  1  0
  9 29  1  0
  9 30  1  0
 10 31  1  1
 14 35  1  0
 14 36  1  0
  1 18  1  0
  1 19  1  0
  1 20  1  0
  3 21  1  0
  3 22  1  0
  3 23  1  0
 13 32  1  0
 13 33  1  0
 13 34  1  0
 16 38  1  0
M  END

View in JSmol View DFT Assignments 3D Conformers

Synonyms

Not Available

Chemical Formula

C₁₄H₂₂O₃

Average Mass

238.3270 Da

Monoisotopic Mass

238.15689 Da

IUPAC Name

(1R,2S,4R,6R,10S)-2-hydroxy-4,12,12-trimethyl-5-oxatricyclo[8.2.0.0^{4,6}]dodecan-9-one

Traditional Name

(1R,2S,4R,6R,10S)-2-hydroxy-4,12,12-trimethyl-5-oxatricyclo[8.2.0.0^{4,6}]dodecan-9-one

CAS Registry Number

Not Available

SMILES

[H]O[C@@]1([H])C([H])([H])[C@]2(O[C@]2([H])C([H])([H])C([H])([H])C(=O)[C@@]2([H])C([H])([H])C(C([H])([H])[H])(C([H])([H])[H])[C@]12[H])C([H])([H])[H]

InChI Identifier

InChI=1S/C14H22O3/c1-13(2)6-8-9(15)4-5-11-14(3,17-11)7-10(16)12(8)13/h8,10-12,16H,4-7H2,1-3H3/t8-,10+,11-,12+,14-/m1/s1

InChI Key

LPQILJLNNPWGIC-KSXHLQSHSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 125 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 150 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 175 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 225 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 250 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Rhizopus stolonifer	JEOL database	Choudhary, M. I., et al, J. Nat. Prod. 69, 1429 (2006)

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as cyclic alcohols and derivatives. These are organic compounds containing an aliphatic ring substituted with at least one hydroxyl group.

Kingdom

Organic compounds

Super Class

Organic oxygen compounds

Class

Organooxygen compounds

Sub Class

Alcohols and polyols

Direct Parent

Cyclic alcohols and derivatives

Alternative Parents

Substituents

Cyclic alcohol
Secondary alcohol
Ketone
Oxacycle
Organoheterocyclic compound
Ether
Oxirane
Dialkyl ether
Organic oxide
Hydrocarbon derivative
Carbonyl group
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.28	ALOGPS
logP	1.37	ChemAxon
logS	-2.1	ALOGPS
pKa (Strongest Acidic)	14.81	ChemAxon
pKa (Strongest Basic)	-2.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	49.83 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	64.1 m³·mol⁻¹	ChemAxon
Polarizability	26.19 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

17250148

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

16091566

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Choudhary, M. I., et al. (2006). Choudhary, M. I., et al, J. Nat. Prod. 69, 1429 (2006) . J. Nat. Prod..

Showing NP-Card for (1R,2S,4R,5R,9S)-4,5-epoxy-13-norcaryophyllan-8-one (NP0032439)

MOL for NP0032439 ((1R,2S,4R,5R,9S)-4,5-epoxy-13-norcaryophyllan-8-one)

3D MOL for NP0032439 ((1R,2S,4R,5R,9S)-4,5-epoxy-13-norcaryophyllan-8-one)

3D SDF for NP0032439 ((1R,2S,4R,5R,9S)-4,5-epoxy-13-norcaryophyllan-8-one)

3D-SDF for NP0032439 ((1R,2S,4R,5R,9S)-4,5-epoxy-13-norcaryophyllan-8-one)

PDB for NP0032439 ((1R,2S,4R,5R,9S)-4,5-epoxy-13-norcaryophyllan-8-one)

3D PDB for NP0032439 ((1R,2S,4R,5R,9S)-4,5-epoxy-13-norcaryophyllan-8-one)

SMILES for NP0032439 ((1R,2S,4R,5R,9S)-4,5-epoxy-13-norcaryophyllan-8-one)

INCHI for NP0032439 ((1R,2S,4R,5R,9S)-4,5-epoxy-13-norcaryophyllan-8-one)

Structure for NP0032439 ((1R,2S,4R,5R,9S)-4,5-epoxy-13-norcaryophyllan-8-one)

3D Structure for NP0032439 ((1R,2S,4R,5R,9S)-4,5-epoxy-13-norcaryophyllan-8-one)